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IVF0009872 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009872
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprefoldin subunit 6
Genome locationchr12:20119848..20132067
RNA-Seq ExpressionIVF0009872
SyntenyIVF0009872
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0043622 - cortical microtubule organization (biological process)
GO:0051131 - chaperone-mediated protein complex assembly (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0051082 - unfolded protein binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR002777 - Prefoldin beta-like
IPR009053 - Prefoldin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147411.1 prefoldin subunit 6 [Cucumis sativus]1.30e-7293.08Show/hide
Query:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ
        MSS++ALRE+QRELEAKANDLSKLQKDIAKNHQVRKKYT+QLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDS LQ
Subjt:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ

Query:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA
        DLEEKQN  RD +LKLQQRIQSLQAGKAKA
Subjt:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA

XP_008444032.1 PREDICTED: prefoldin subunit 6 [Cucumis melo]1.72e-77100Show/hide
Query:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ
        MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ
Subjt:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ

Query:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA
        DLEEKQNSNRDAILKLQQRIQSLQAGKAKA
Subjt:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA

XP_022140149.1 prefoldin subunit 6-like [Momordica charantia]4.55e-7394.62Show/hide
Query:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ
        MSS SALRELQRELEAKAN+LSKLQKDIAKNHQVRKKYT+QLGENELVLKELDLL DD NVYKLIGPVLVKQDLAEANANVRKRI+YISAELKRLDSALQ
Subjt:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ

Query:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA
        DLEEKQNS RDAILKLQQRIQSLQAGKAKA
Subjt:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA

XP_022994921.1 prefoldin subunit 6-like [Cucurbita maxima]5.31e-7293.08Show/hide
Query:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ
        MSSTS LRELQRELE+KANDLSKLQKDIAKNHQVRKKYT+QLGENELVLKELDLL+DD NV+KLIGPVLVKQDLAEANANVRKRI+YISAELKRLDSALQ
Subjt:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ

Query:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA
        DLEEKQNS RDAILKLQQR QSLQAGKAKA
Subjt:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA

XP_038895368.1 prefoldin subunit 6 [Benincasa hispida]2.74e-7496.15Show/hide
Query:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ
        MSSTSALRELQRELE KANDLSKLQKDIAKNHQVRKKYT+QLGENELVLKELDLL DD NVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ
Subjt:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ

Query:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA
        DLEEKQNS RDAILKLQQRIQSLQAGKAKA
Subjt:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA

TrEMBL top hitse value%identityAlignment
A0A1S3B9I1 prefoldin subunit 61.1e-58100Show/hide
Query:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ
        MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ
Subjt:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ

Query:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA
        DLEEKQNSNRDAILKLQQRIQSLQAGKAKA
Subjt:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA

A0A6J1CEX4 prefoldin subunit 6-like2.5e-5594.62Show/hide
Query:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ
        MSS SALRELQRELEAKAN+LSKLQKDIAKNHQVRKKYT+QLGENELVLKELDLL DD NVYKLIGPVLVKQDLAEANANVRKRI+YISAELKRLDSALQ
Subjt:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ

Query:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA
        DLEEKQNS RDAILKLQQRIQSLQAGKAKA
Subjt:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA

A0A6J1EGS1 prefoldin subunit 6-like1.6e-5493.02Show/hide
Query:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ
        MSSTSA+RELQRELE+KANDLSKLQKDIAKNHQ+RKKYT+QLGENELVLKELDLL+DD NVYKLIGPVLVKQDLAEANANVRKRI+YISAELKRLDSALQ
Subjt:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ

Query:  DLEEKQNSNRDAILKLQQRIQSLQAGKAK
        DLEEKQNS RDAILKLQQRIQS QAGKAK
Subjt:  DLEEKQNSNRDAILKLQQRIQSLQAGKAK

A0A6J1K0L9 prefoldin subunit 6-like1.6e-5493.08Show/hide
Query:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ
        MSSTS LRELQRELE+KANDLSKLQKDIAKNHQVRKKYT+QLGENELVLKELDLL+DD NV+KLIGPVLVKQDLAEANANVRKRI+YISAELKRLDSALQ
Subjt:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ

Query:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA
        DLEEKQNS RDAILKLQQR QSLQAGKAKA
Subjt:  DLEEKQNSNRDAILKLQQRIQSLQAGKAKA

A0A6J1KLC2 prefoldin subunit 6-like1.6e-5493.02Show/hide
Query:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ
        MSSTSA+RELQRELE KANDLSKLQKDIAKNHQ+RKKYT+QLGENELVLKEL+LL+DD NVYKLIGPVLVKQDLAEANANVRKRI+YISAELKRLDSALQ
Subjt:  MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQ

Query:  DLEEKQNSNRDAILKLQQRIQSLQAGKAK
        DLEEKQNS RDAILKLQQRIQSLQAGKAK
Subjt:  DLEEKQNSNRDAILKLQQRIQSLQAGKAK

SwissProt top hitse value%identityAlignment
O15212 Prefoldin subunit 66.5e-2146.28Show/hide
Query:  LQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSN
        +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR +S L+DLE +    
Subjt:  LQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSN

Query:  RDAILKLQQRIQSLQAGKAKA
        R+ + +LQQ  Q  QA KA A
Subjt:  RDAILKLQQRIQSLQAGKAKA

Q03958 Prefoldin subunit 68.5e-2146.22Show/hide
Query:  LQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSN
        +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR +S L+DLE +    
Subjt:  LQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSN

Query:  RDAILKLQQRIQSLQAGKA
        R+ + +LQQ  Q  QA KA
Subjt:  RDAILKLQQRIQSLQAGKA

Q17Q89 Prefoldin subunit 63.8e-2146.28Show/hide
Query:  LQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSN
        +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR +S L+DLE++    
Subjt:  LQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSN

Query:  RDAILKLQQRIQSLQAGKAKA
        R+ + +LQQ  Q  QA KA A
Subjt:  RDAILKLQQRIQSLQAGKAKA

Q5TJE6 Prefoldin subunit 66.5e-2146.28Show/hide
Query:  LQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSN
        +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR +S L+DLE +    
Subjt:  LQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSN

Query:  RDAILKLQQRIQSLQAGKAKA
        R+ + +LQQ  Q  QA KA A
Subjt:  RDAILKLQQRIQSLQAGKAKA

Q9VW56 Probable prefoldin subunit 64.8e-1645.54Show/hide
Query:  LQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSN
        L ++++A+      LQK   K  + R     QL EN+ VL EL+LL  D  VYKL GPVLVKQ+L E+  NV KRIEYIS ELK    AL+++E+    +
Subjt:  LQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSN

Query:  RDAILKLQQRIQ
        R+++ K QQ+ Q
Subjt:  RDAILKLQQRIQ

Arabidopsis top hitse value%identityAlignment
AT1G29990.1 prefoldin 61.3e-5180.47Show/hide
Query:  STSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDL
        S+S +R+LQR+LE KANDL K+QKDI KNHQ+RKKYT+QLGENELVLKELDLL++D NVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLD+ LQD+
Subjt:  STSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDL

Query:  EEKQNSNRDAILKLQQRIQSLQAGKAKA
        EEKQN+ R+ I+KLQQR+Q++QAGKAKA
Subjt:  EEKQNSNRDAILKLQQRIQSLQAGKAKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTACAAGCGCTCTTCGAGAGCTACAGCGCGAGTTGGAGGCCAAAGCCAACGATCTCAGCAAGCTACAGAAAGATATTGCGAAAAATCACCAAGTGAGGAAGAA
GTACACTGTTCAGCTGGGTGAGAACGAGCTCGTCCTTAAGGAATTGGATTTACTTCAAGACGACACAAATGTATATAAACTGATTGGTCCAGTGCTCGTGAAGCAAGATT
TGGCAGAAGCAAATGCAAATGTGCGCAAGAGAATTGAATACATCTCTGCAGAATTGAAACGTCTTGATTCAGCCCTTCAAGATTTGGAAGAGAAGCAAAATAGCAACAGA
GATGCGATATTGAAGTTACAACAGAGGATACAATCTCTGCAGGCTGGAAAAGCTAAAGCATAA
mRNA sequenceShow/hide mRNA sequence
TAATTCCTTCTTCCTTCGTGTTACCTTAGCCCCCCTTTGGCGTTAATTCCTACTACTACTGATTCCCATATTTTTCCCCCTTTAATAAAATCGACTACGATCAACCTTTC
CCAGTCGACGATTCTCAGTCGGAATGAGTTCTACAAGCGCTCTTCGAGAGCTACAGCGCGAGTTGGAGGCCAAAGCCAACGATCTCAGCAAGCTACAGAAAGATATTGCG
AAAAATCACCAAGTGAGGAAGAAGTACACTGTTCAGCTGGGTGAGAACGAGCTCGTCCTTAAGGAATTGGATTTACTTCAAGACGACACAAATGTATATAAACTGATTGG
TCCAGTGCTCGTGAAGCAAGATTTGGCAGAAGCAAATGCAAATGTGCGCAAGAGAATTGAATACATCTCTGCAGAATTGAAACGTCTTGATTCAGCCCTTCAAGATTTGG
AAGAGAAGCAAAATAGCAACAGAGATGCGATATTGAAGTTACAACAGAGGATACAATCTCTGCAGGCTGGAAAAGCTAAAGCATAACATGTTTTACTGTTGTTTTCAGCT
GTACGTTCTAAACTTATGTTATCTTTTTGCAATCTCTCTTGTATCAGTTAAAGATAAACTCACTCAAAAGCTTGACAATACTTAGTTTGATTTTGAAGCTTGACAAGACT
TAGTCCGATTTTGATTTTAGATACGTACATAACTTTCCTACTTCTTGCAAAGTACTTAACGGGAACTTCATCTCCAAAAAATTTTTTGCATTTGTAATTTGACAAAA
Protein sequenceShow/hide protein sequence
MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSNR
DAILKLQQRIQSLQAGKAKA