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IVF0009958 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009958
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr05:2577901..2578182
RNA-Seq ExpressionIVF0009958
SyntenyIVF0009958
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006413 - translational initiation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053473.1 Aspartic peptidase, DDI1-type [Cucumis melo var. makuwa]2.92e-5492.47Show/hide
Query:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
        MGALKFLSSLQKKVGETN PVERGLMYVDTWINQKPTKS MVDSGATHNFITE EAKRLNL WEKDAGRMK VNSAA PIIGLV+RTMIRLGG
Subjt:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG

KAA0057286.1 uncharacterized protein E6C27_scaffold280G001270 [Cucumis melo var. makuwa]1.79e-54100Show/hide
Query:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
        MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
Subjt:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG

KAA0061351.1 uncharacterized protein E6C27_scaffold749G00340 [Cucumis melo var. makuwa]6.70e-5597.85Show/hide
Query:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
        MGALKFLSSLQKKVGETNTPVERGLMYVDTWIN+KPTKSTMVDSGATHNFITE EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
Subjt:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG

KAA0064238.1 Importin subunit alpha-2 [Cucumis melo var. makuwa]6.92e-5694.57Show/hide
Query:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLG
        MGAL+FLSSLQKKVGETNTPVE+GLMYVDTWIN+KPTKSTMVDSGATHNFITE EAKRLNLRWEKDAGRMKAVNSAALPIIGLVK+TMIRLG
Subjt:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLG

TYK25585.1 uncharacterized protein E5676_scaffold352G007440 [Cucumis melo var. makuwa]2.18e-53100Show/hide
Query:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
        MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
Subjt:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG

TrEMBL top hitse value%identityAlignment
A0A5A7T0E2 Reverse transcriptase1.4e-44100Show/hide
Query:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
        MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
Subjt:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG

A0A5D3B7E7 Reverse transcriptase1.4e-44100Show/hide
Query:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
        MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
Subjt:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG

A0A5D3BRZ6 Reverse transcriptase1.4e-44100Show/hide
Query:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
        MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
Subjt:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG

A0A5D3C4R1 Reverse transcriptase1.4e-44100Show/hide
Query:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
        MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
Subjt:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG

A0A5D3DQ20 Retrotrans_gag domain-containing protein1.4e-44100Show/hide
Query:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
        MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG
Subjt:  MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCCTTGAAATTTCTGTCATCTCTCCAGAAAAAGGTGGGGGAGACGAACACGCCAGTGGAAAGGGGATTAATGTACGTTGACACCTGGATCAACCAAAAGCCAAC
CAAAAGCACTATGGTTGACTCCGGTGCCACCCACAATTTCATAACAGAAGTAGAAGCTAAACGTTTGAATCTCCGCTGGGAGAAGGATGCTGGAAGAATGAAAGCCGTGA
ATTCTGCTGCCCTACCTATCATCGGACTAGTGAAACGAACGATGATAAGATTGGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCCTTGAAATTTCTGTCATCTCTCCAGAAAAAGGTGGGGGAGACGAACACGCCAGTGGAAAGGGGATTAATGTACGTTGACACCTGGATCAACCAAAAGCCAAC
CAAAAGCACTATGGTTGACTCCGGTGCCACCCACAATTTCATAACAGAAGTAGAAGCTAAACGTTTGAATCTCCGCTGGGAGAAGGATGCTGGAAGAATGAAAGCCGTGA
ATTCTGCTGCCCTACCTATCATCGGACTAGTGAAACGAACGATGATAAGATTGGGAGGATGA
Protein sequenceShow/hide protein sequence
MGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGG