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IVF0009968 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009968
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCASP-like protein
Genome locationchr11:26772167..26772397
RNA-Seq ExpressionIVF0009968
SyntenyIVF0009968
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR006459 - Casparian strip membrane protein
IPR006702 - Casparian strip membrane protein domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150813.1 CASP-like protein 1E1 [Cucumis sativus]1.08e-3792.11Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
        MDILTVALLFSGFGAAAAVGAIG +GNSHLNWNK+CNVFGRFCGQGAASLLLSLLGA++FLSLSLLSA RLQRGFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK

XP_008458485.1 PREDICTED: CASP-like protein 1E1 isoform X4 [Cucumis melo]5.16e-43100Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
        MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK

XP_016902254.1 PREDICTED: CASP-like protein 1E2 isoform X1 [Cucumis melo]2.36e-42100Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
        MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK

XP_016902255.1 PREDICTED: CASP-like protein 1E1 isoform X2 [Cucumis melo]1.09e-42100Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
        MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK

XP_016902256.1 PREDICTED: CASP-like protein 1E2 isoform X3 [Cucumis melo]7.97e-43100Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
        MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK

TrEMBL top hitse value%identityAlignment
A0A0A0KHF5 CASP-like protein1.5e-2892.11Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
        MDILTVALLFSGFGAAAAVGAIG +GNSHLNWNK+CNVFGRFCGQGAASLLLSLLGA++FLSLSLLSA RLQRGFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK

A0A1S3C7G4 CASP-like protein1.3e-32100Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
        MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK

A0A1S4E1Z7 CASP-like protein1.3e-32100Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
        MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK

A0A1S4E203 CASP-like protein1.3e-32100Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
        MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK

A0A1S4E2P9 CASP-like protein1.3e-32100Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
        MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK

SwissProt top hitse value%identityAlignment
A7NW78 CASP-like protein 1E25.9e-1452.05Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQR
        MD++ VALLFS  GAA A+G +G+ GNS + W K+CNVFG+FC Q A +L LS  G +AF  L +++AF L +
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQR

B9HMP6 CASP-like protein 1E19.1e-1552.63Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
        +D+L VA+LFS  GAA A+G +G++GNSH+ W K+C+VFGRFC Q A S+ LSLLG++ FL L  +++ RL +  K
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK

B9RT04 CASP-like protein 1E13.0e-1857.89Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK
        +D+L VALLFS  GAA A+G +G++GNSH+ WNK+CNVFG+FC Q AAS++LSL+G++ F+ L +L+AFRL    K
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK

C6SZP8 CASP-like protein 1E23.0e-1861.64Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQR
        +D   VALLFSG GAAAAVG +G++GNSH+NWNK+CNVFG+FC Q AAS+ +SL+G++AFL L ++   RL R
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQR

C6TBD0 CASP-like protein 1E15.2e-1861.64Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQR
        +D   VALLFSG GAAAAVG +G++GNSH+NWNK+CNVFG+FC Q AAS+ +SL+G++AFL L ++   RL R
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQR

Arabidopsis top hitse value%identityAlignment
AT3G06390.1 Uncharacterised protein family (UPF0497)6.5e-0841.18Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSA
        +D++ + +L S  G A  V  I  +GN  + WNK+CNV+ +FC   A SL LSL  ++  L LS+ SA
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSA

AT4G15610.1 Uncharacterised protein family (UPF0497)2.7e-0630.14Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQR
        MD + V ++ S  GA   V  +G +GN  + W K+C+++ +FC     ++ +SL  ++  L LS++S   L +
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQR

AT4G15620.1 Uncharacterised protein family (UPF0497)6.1e-1452.86Show/hide
Query:  DILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRL
        D++ VALLFSG GAA+A+G +G  GN H+ W K+C VFG+FC + A SL L+LL A+ F+ L +L A +L
Subjt:  DILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRL

AT4G15630.1 Uncharacterised protein family (UPF0497)5.1e-1347.14Show/hide
Query:  DILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRL
        D++ VALLFS  GAA A+G +G  GN H+ W K+C VFG+FC Q A S+ ++L+ ++ F+ L +L A +L
Subjt:  DILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRL

AT5G44550.1 Uncharacterised protein family (UPF0497)9.4e-0735.21Show/hide
Query:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRL
        +D+L V L+ +   AAA +  +G  GN H  W+K+C+ F  +C  GA +L+ +  G +  L +S  S  RL
Subjt:  MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATTCTCACGGTGGCCCTGCTGTTTTCCGGCTTCGGAGCGGCTGCTGCCGTCGGCGCCATCGGCTGGCGAGGGAATTCTCATCTTAATTGGAACAAAATGTGCAA
TGTGTTTGGAAGATTTTGTGGGCAAGGAGCTGCTTCTCTTCTCCTCTCTTTGCTTGGAGCGATGGCGTTTCTCTCTCTTTCTCTGCTTTCTGCTTTCAGGCTTCAAAGGG
GATTCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACATTCTCACGGTGGCCCTGCTGTTTTCCGGCTTCGGAGCGGCTGCTGCCGTCGGCGCCATCGGCTGGCGAGGGAATTCTCATCTTAATTGGAACAAAATGTGCAA
TGTGTTTGGAAGATTTTGTGGGCAAGGAGCTGCTTCTCTTCTCCTCTCTTTGCTTGGAGCGATGGCGTTTCTCTCTCTTTCTCTGCTTTCTGCTTTCAGGCTTCAAAGGG
GATTCAAGTAA
Protein sequenceShow/hide protein sequence
MDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFLSLSLLSAFRLQRGFK