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IVF0010003 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010003
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein transport protein Sec61 subunit gamma
Genome locationchr02:22868433..22870481
RNA-Seq ExpressionIVF0010003
SyntenyIVF0010003
Gene Ontology termsGO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0071261 - Ssh1 translocon complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domainsIPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit
IPR008158 - Protein translocase SEC61 complex, gamma subunit
IPR023391 - Protein translocase SecE domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RWR75919.1 protein transport protein Sec61 subunit gamma [Cinnamomum micranthum f. kanehirae]1.88e-3794.2Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLR FAKDSVRLVKRCHKPDR EFTKVAVRTAIGFVVMGFVGFFVKL+FIPINNIIVGSG
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_008439824.1 PREDICTED: protein transport protein Sec61 subunit gamma [Cucumis melo]1.32e-3795.65Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLR FAKDSVRLVKRCHKPDR EFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_008464427.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Cucumis melo]3.24e-3898.55Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFI INNIIVGSG
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_019703602.1 protein transport protein Sec61 subunit gamma [Elaeis guineensis]1.88e-3795.65Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLR FAKDSVRLVKRCHKPDR EFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_020163946.1 protein transport protein Sec61 subunit gamma [Aegilops tauschii subsp. strangulata]1.88e-3794.2Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLR FAKDSVRLVKRCHKPDR EFTKVA+RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

TrEMBL top hitse value%identityAlignment
A0A1S3CLG0 protein transport protein Sec61 subunit gamma-like4.0e-2898.55Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFI INNIIVGSG
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A5D3BJ11 Protein transport protein Sec61 subunit gamma1.2e-2795.65Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLR FAKDSVRLVKRCHKPDR EFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A6J1CA50 uncharacterized protein LOC111008832 isoform X21.2e-2795.65Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLR FAKDSVRLVKRCHKPDR EFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A6J1GT74 protein transport protein Sec61 subunit gamma1.2e-2795.65Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLR FAKDSVRLVKRCHKPDR EFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A6J1JW08 protein transport protein Sec61 subunit gamma1.2e-2795.65Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLR FAKDSVRLVKRCHKPDR EFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

SwissProt top hitse value%identityAlignment
P0DI74 Protein transport protein Sec61 subunit gamma-15.9e-2994.12Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSVVDPLR FAKDS+RLVKRCHKPDR EFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P0DI75 Protein transport protein Sec61 subunit gamma-25.9e-2994.12Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSVVDPLR FAKDS+RLVKRCHKPDR EFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P38385 Protein transport protein Sec61 subunit gamma9.1e-3094.2Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLR FAKDSVRLVKRCHKPDR EFTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

Q7Z1B8 Protein transport protein Sec61 subunit gamma4.5e-2172.06Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MD +   ++P R FAKDS+RLVKRC KPDR EF K+AV TAIGF +MGF+GFFVKLI IPINNIIVGS
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Q9SMP2 Protein transport protein Sec61 subunit gamma-34.2e-2788.24Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+AIDS +DPLR FAK SVRLV+RCHKPDR EFTKVAVRTAIGFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Arabidopsis top hitse value%identityAlignment
AT3G48570.1 secE/sec61-gamma protein transport protein3.0e-2888.24Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+AIDS +DPLR FAK SVRLV+RCHKPDR EFTKVAVRTAIGFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

AT4G24920.1 secE/sec61-gamma protein transport protein4.2e-3094.12Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSVVDPLR FAKDS+RLVKRCHKPDR EFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

AT5G50460.1 secE/sec61-gamma protein transport protein4.2e-3094.12Show/hide
Query:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSVVDPLR FAKDS+RLVKRCHKPDR EFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCCATTGATTCAGTTGTTGATCCTCTCAGAGCCTTCGCTAAGGACAGCGTTCGTCTTGTCAAAAGATGCCACAAGCCTGATCGCAATGAATTCACTAAAGTGGC
AGTCCGTACGGCCATCGGTTTCGTCGTGATGGGATTTGTAGGGTTCTTCGTCAAGTTGATCTTTATTCCCATTAACAATATAATCGTCGGATCTGGATAG
mRNA sequenceShow/hide mRNA sequence
TATATATATGTTTGTGATAAATCCTTTTAAATCACAAGGAAGTCAACCCGTCCGGTTTCCGTCTCCAATCATTCCGACGAATCTCTTCCCCGTTCCCAAATTATCAAAAT
TTTCTTTCTTCTTCGTGGGGAATGGATGCCATTGATTCAGTTGTTGATCCTCTCAGAGCCTTCGCTAAGGACAGCGTTCGTCTTGTCAAAAGATGCCACAAGCCTGATCG
CAATGAATTCACTAAAGTGGCAGTCCGTACGGCCATCGGTTTCGTCGTGATGGGATTTGTAGGGTTCTTCGTCAAGTTGATCTTTATTCCCATTAACAATATAATCGTCG
GATCTGGATAGGGTTGAAATTCCTGATTGGAAGCATTCTGGTTGAACACATTTTCACTGAGTAATGTCAAGCAGTTGTCATTGTCACTTCGGCAGTTTATAATTTTCCCC
TCCTGATTTTAGTGTTTGTCAAGCAAACTGCAAACCGCGTTTGAGTATATAATTACAGTGTTTATTTTCTTTTCCTTATTGAATAAAAATTTCTCTATTAGTGTTCTCCC
TGAGGATAATATTCTGCTGATTAGATTGCTTTACAATTACTGTAATGGTCCCTTTTTTGTTCTTCCCTTACCTTTATTTCCAACCCCCCCAAATTCTTATTCCATATTCC
TCCTGTCATTGATAGTGACCTTCCAAGAGTGTAAGGGCCAAGATTGCCATTGGTTGGCTGCGAGCTCTTAAGAACAGAAATAGTTGGGTCAGCTTGAAAAGCTTGTTCAA
AATTTCTTTTGGGAGGGACCTTTGATGGAGAAAGGAACACACGTCACACAATGTTAGCTGAGATGTGTATCATCGAAAAGCCTCTTCTTTTAGGAGATTTAGATATAGGA
AATTTATAACAGAAGAATGAATCCTTACTTGCAAAACGGGTATGGAGATTCTGTTACGAAAAGAAGGCACCCCATTTGGAGGAAATTTGTAGTTTCTAAATACTATTTAT
CTGCTCCTTGCCACCATTGGCCAATTCCTGCATATTACTTCTCCAGAAAAGCAAAGGATCGATGCAAGCAGAAAATTCGATTTGGAAAGAGACGTCCTTTTTAACAAACA
CTGAATTGGACAATTACCTTCGGCTGCTACTAATACCAATCTTTGTAAACTCAGCAATAAACCCAATGCTACAACCACTATCTGTTAAACAAACACAATAAAGAAGGCTG
ATCCTCCTTACAAAACACAAGAGAATTAACATCAGTGGTAAGCTGCAAACGAAATTCCCATACCAGGCCTTATGCCCTTCTGTTTACCATTTTTTGTTTGAAAGAATCAT
AATCTCAAGGCCATCTCTTCATCAGTTGCACTTATGCCTTTCAATTCTGGATAACAGTTTTAGAGTCCCTCAGCTGATTTACAGTGATGCCCATCAACATTGACGATTTT
CTTTCGAATTTCCTTATGGGGGCACCCTTTCAAAGCTCAAAAGGAAGTTCTATGGACACAATTAGTCAAAGGAGGACCCTTTGGAGGGAGAGGAACAACCCCTTTTTCCA
CGATAGTGCCAATCCAATTTCATTTTTTCACTTAGTGCGCTTTATTGCTTTCAGTTGGTGTAAATGTACAAATTCCTTTCAGGTCTGTAGTCTCTCTAATCCTATAGCTA
CATGCCACAATTTTTTGCTATCCACACTGGGTGGTTGGAAATTTTTCCACCCCCTTTTTGTAAAATTCACATATTCAATGGAAATTTACTTGTGTATTGTCCTTTTGCAT
CTTGCTTCTAGCATAC
Protein sequenceShow/hide protein sequence
MDAIDSVVDPLRAFAKDSVRLVKRCHKPDRNEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG