; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0010041 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010041
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptiontranscription factor bHLH100
Genome locationchr05:3079079..3082594
RNA-Seq ExpressionIVF0010041
SyntenyIVF0010041
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR015660 - Achaete-scute transcription factor-related
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449406.1 PREDICTED: transcription factor bHLH100 [Cucumis melo]8.88e-11465.78Show/hide
Query:  MSLTPWEEHILIDEDNGIEEEETPLRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINAHNEEPS
        MSLTPWEEHILIDEDNGIEEEETPLRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINAHNEEPS
Subjt:  MSLTPWEEHILIDEDNGIEEEETPLRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINAHNEEPS

Query:  NSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSK-----------------------------------------------------------
        NSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSK                                                           
Subjt:  NSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSK-----------------------------------------------------------

Query:  --------------------------------------------AEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWLC
                                                    AEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWLC
Subjt:  --------------------------------------------AEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWLC

Query:  C
        C
Subjt:  C

XP_022963582.1 transcription factor bHLH160 [Cucurbita moschata]1.86e-2939.93Show/hide
Query:  MSLTPWEEHI-LIDEDNGIEEEETPLRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINAHNEEP
        M++ PWE +  L DE+NG                  EE   L K GE    L  EI G S+ E + LLGL+E  +IYG   REN+    PP++NA N EP
Subjt:  MSLTPWEEHI-LIDEDNGIEEEETPLRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINAHNEEP

Query:  SNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSK----------------------------------------------------------
        SN     AKKEEHNARERQRR+ELS  YFSLRSLLPNARRSK                                                          
Subjt:  SNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSK----------------------------------------------------------

Query:  --------------------------------AEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWLC
                                        AEEEGLRIIGASTV VS H H  LTSHLH QM D+S++E  D KSI RKRVISWLC
Subjt:  --------------------------------AEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWLC

XP_023553728.1 transcription factor bHLH160 [Cucurbita pepo subsp. pepo]8.66e-3140.97Show/hide
Query:  MSLTPWEEHI-LIDEDNGIEEEETPLRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINAHNEEP
        M++TPWE +  L DE+NG                  EE   L K GE    L  EI G S+ E + LLGL+E  +IYG L REN+    PP++NA N EP
Subjt:  MSLTPWEEHI-LIDEDNGIEEEETPLRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINAHNEEP

Query:  SNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSK----------------------------------------------------------
        SN     AKKEEHNARERQRR+ELS  YFSLRSLLPNARRSK                                                          
Subjt:  SNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSK----------------------------------------------------------

Query:  --------------------------------AEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWLC
                                        AEEEGLRIIGASTV VS H H  LTSHLH QM DRS++E  D KSI RKRVISWLC
Subjt:  --------------------------------AEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWLC

XP_031743831.1 transcription factor bHLH160 [Cucumis sativus]4.49e-8958.67Show/hide
Query:  MSLTPWEEHILIDEDNGIEEEETPLRNWSNNNGELEEI---IRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDN-IYGVLERENSKLFPPPSINAHN
        MSL PWEEHILIDEDNGIEE+E PLRNWSNNNGELEEI   I+ SKSGEEALLLPNEIIG SLVEDSTLLGL+E+D+ I GVLERENSKLFPP SIN HN
Subjt:  MSLTPWEEHILIDEDNGIEEEETPLRNWSNNNGELEEI---IRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDN-IYGVLERENSKLFPPPSINAHN

Query:  EEPSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSK-------------------------------------------------------
        EEPSNSNK NAKKEEHNARERQRRL+LSHSYFSLRSLLPNARRSK                                                       
Subjt:  EEPSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSK-------------------------------------------------------

Query:  --------------------------------------------AEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWLC
                                                    AE EGLRIIGASTVSVSH DHQILTSHLH+QMMDRSLQEAAD +S+ RKRVISWLC
Subjt:  --------------------------------------------AEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWLC

XP_038888939.1 transcription factor bHLH160 [Benincasa hispida]1.43e-4646.21Show/hide
Query:  MSLTPWEEHILIDEDNGIEEEETP------LRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINA
        MSLT WEE+IL++E+NGI E E P      L + SNNNGELEE  +LS++GE   LL +EI+G SL+E +TLLGL+E  NI GVLE+E+SKL P   INA
Subjt:  MSLTPWEEHILIDEDNGIEEEETP------LRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINA

Query:  HNEEPSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSK-----------------------------------------------------
         N EPS +NK NAKKEEHNARERQRR++LSHSYFSLRSLLPNARRSK                                                     
Subjt:  HNEEPSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSK-----------------------------------------------------

Query:  ---------------------------------------AEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRV
                                               A+ EGL IIGASTVSVSH DH  L+ HLH+QM DRS+QEAAD KSI RK++
Subjt:  ---------------------------------------AEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRV

TrEMBL top hitse value%identityAlignment
A0A0A0KGG0 BHLH domain-containing protein1.3e-8387.56Show/hide
Query:  MSLTPWEEHILIDEDNGIEEEETPLRNWSNNNGELEEI---IRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESD-NIYGVLERENSKLFPPPSINAHN
        MSL PWEEHILIDEDNGIEE+E PLRNWSNNNGELEEI   I+ SKSGEEALLLPNEIIG SLVEDSTLLGL+E+D +I GVLERENSKLFPP SIN HN
Subjt:  MSLTPWEEHILIDEDNGIEEEETPLRNWSNNNGELEEI---IRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESD-NIYGVLERENSKLFPPPSINAHN

Query:  EEPSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSKAEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWL
        EEPSNSNK NAKKEEHNARERQRRL+LSHSYFSLRSLLPNARRSKAE EGLRIIGASTVSVS HDHQILTSHLH+QMMDRSLQEAAD +S+ RKRVISWL
Subjt:  EEPSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSKAEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWL

Query:  C
        C
Subjt:  C

A0A1S3BLZ5 transcription factor bHLH1007.3e-9065.78Show/hide
Query:  MSLTPWEEHILIDEDNGIEEEETPLRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINAHNEEPS
        MSLTPWEEHILIDEDNGIEEEETPLRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINAHNEEPS
Subjt:  MSLTPWEEHILIDEDNGIEEEETPLRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINAHNEEPS

Query:  NSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS------------------------------------------------------------
        NSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS                                                            
Subjt:  NSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS------------------------------------------------------------

Query:  -------------------------------------------KAEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWLC
                                                   KAEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWLC
Subjt:  -------------------------------------------KAEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWLC

Query:  C
        C
Subjt:  C

A0A6J1DXT5 transcription factor bHLH1603.4e-1839.46Show/hide
Query:  DNIYGVLERENSKLFP--PPSINAHNEE------PSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS------------------------
        D  YG +EREN  LFP  PPSIN +N E       SNSN  NAKKEEHNA+ER+RR++LS +YFSLRSLLPN+RRS                        
Subjt:  DNIYGVLERENSKLFP--PPSINAHNEE------PSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS------------------------

Query:  -------------------------------------------------------------------KAEEEGLRIIGASTVSVSHHDHQILTSHLHVQM
                                                                           KAE EG+ IIGASTVSVS  DH  LT HLHVQ 
Subjt:  -------------------------------------------------------------------KAEEEGLRIIGASTVSVSHHDHQILTSHLHVQM

Query:  MDRSLQEAADNKSISRKRVISWL
        M+ SLQE+AD +S+ RK+VISWL
Subjt:  MDRSLQEAADNKSISRKRVISWL

A0A6J1HFM3 transcription factor bHLH1603.1e-2439.93Show/hide
Query:  MSLTPWEE-HILIDEDNGIEEEETPLRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINAHNEEP
        M++ PWE  + L DE+NG  EE+T                 L   G EAL      IG S+ E + LLGL+E  +IYG   REN+    PP++NA N EP
Subjt:  MSLTPWEE-HILIDEDNGIEEEETPLRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINAHNEEP

Query:  SNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS-----------------------------------------------------------
        S     NAKKEEHNARERQRR+ELS  YFSLRSLLPNARRS                                                           
Subjt:  SNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS-----------------------------------------------------------

Query:  -------------------------------KAEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWLC
                                       KAEEEGLRIIGASTV VS H H  LTSHLH Q MD+S++E  D KSI RKRVISWLC
Subjt:  -------------------------------KAEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISWLC

A0A6J1HVK8 transcription factor bHLH1602.0e-2338.81Show/hide
Query:  MSLTPWEE-HILIDEDNGIEEEETPLRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINAHNEEP
        M++TPWE  + L DE+NG EE + P                    G EAL       G S+ E + LLGL+E  +IYG   REN     PP++NA N EP
Subjt:  MSLTPWEE-HILIDEDNGIEEEETPLRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKESDNIYGVLERENSKLFPPPSINAHNEEP

Query:  SNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS-----------------------------------------------------------
        S     NAKKEEHNARERQRR+ELS  YFSLRSLLPNARRS                                                           
Subjt:  SNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS-----------------------------------------------------------

Query:  -------------------------------KAEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISW
                                       KAEE+GLRIIGAS +SVS H H  LTSHLH Q MDRS++E  D KSI RKRVISW
Subjt:  -------------------------------KAEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAADNKSISRKRVISW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGAGTAGGTTATTTCTTAATAATCAACAAAGTAAAACTTCATTTTGTTCATCTCTCTTCTTCAAATCAGAGAAGCTTAGAAAGAACACAGAGGAAATATTTTTT
GAGTATGTCATTGACACCGTGGGAGGAACATATATTGATTGATGAAGACAATGGAATTGAAGAGGAAGAAACTCCATTAAGAAATTGGAGTAATAATAATGGAGAATTAG
AAGAAATTATCCGATTATCAAAAAGTGGAGAAGAAGCATTGTTATTACCAAACGAAATAATTGGAAGATCACTTGTGGAAGATTCAACATTATTGGGTTTGAAGGAAAGT
GATAACATTTATGGAGTTTTAGAGAGAGAAAATTCAAAATTATTTCCACCACCATCCATTAATGCTCATAATGAAGAACCCTCAAATTCAAATAAAGAAAATGCAAAGAA
AGAAGAACACAATGCTAGAGAAAGACAAAGAAGGTTGGAACTCTCTCACTCCTATTTTTCACTTCGCTCTTTGCTTCCCAATGCTAGAAGATCAAAGGCAGAAGAAGAAG
GCTTAAGGATCATTGGTGCTTCCACAGTTTCTGTTTCTCATCATGACCATCAGATTCTTACCTCCCATTTGCATGTTCAGATGATGGATAGGAGTTTACAAGAAGCTGCT
GATAATAAATCAATATCAAGAAAAAGGGTAATCTCTTGGTTATGTTGCTGA
mRNA sequenceShow/hide mRNA sequence
GTGTGTGTATTTGGATGCAAAGAGTAGGTTATTTCTTAATAATCAACAAAGTAAAACTTCATTTTGTTCATCTCTCTTCTTCAAATCAGAGAAGCTTAGAAAGAACACAG
AGGAAATATTTTTTGAGTATGTCATTGACACCGTGGGAGGAACATATATTGATTGATGAAGACAATGGAATTGAAGAGGAAGAAACTCCATTAAGAAATTGGAGTAATAA
TAATGGAGAATTAGAAGAAATTATCCGATTATCAAAAAGTGGAGAAGAAGCATTGTTATTACCAAACGAAATAATTGGAAGATCACTTGTGGAAGATTCAACATTATTGG
GTTTGAAGGAAAGTGATAACATTTATGGAGTTTTAGAGAGAGAAAATTCAAAATTATTTCCACCACCATCCATTAATGCTCATAATGAAGAACCCTCAAATTCAAATAAA
GAAAATGCAAAGAAAGAAGAACACAATGCTAGAGAAAGACAAAGAAGGTTGGAACTCTCTCACTCCTATTTTTCACTTCGCTCTTTGCTTCCCAATGCTAGAAGATCAAA
GGCAGAAGAAGAAGGCTTAAGGATCATTGGTGCTTCCACAGTTTCTGTTTCTCATCATGACCATCAGATTCTTACCTCCCATTTGCATGTTCAGATGATGGATAGGAGTT
TACAAGAAGCTGCTGATAATAAATCAATATCAAGAAAAAGGGTAATCTCTTGGTTATGTTGCTGA
Protein sequenceShow/hide protein sequence
MQRVGYFLIINKVKLHFVHLSSSNQRSLERTQRKYFLSMSLTPWEEHILIDEDNGIEEEETPLRNWSNNNGELEEIIRLSKSGEEALLLPNEIIGRSLVEDSTLLGLKES
DNIYGVLERENSKLFPPPSINAHNEEPSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSKAEEEGLRIIGASTVSVSHHDHQILTSHLHVQMMDRSLQEAA
DNKSISRKRVISWLCC