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IVF0010053 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010053
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionActin-related protein 2/3 complex subunit 4
Genome locationchr06:4662472..4666771
RNA-Seq ExpressionIVF0010053
SyntenyIVF0010053
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR008384 - Actin-related protein 2/3 complex subunit 4
IPR034666 - Arp2/3 complex subunit 2/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KMT16267.1 hypothetical protein BVRB_3g054210 isoform A [Beta vulgaris subsp. vulgaris]8.60e-2480Show/hide
Query:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRIGKLLMFPI
        A T+RLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVE+KTS ELLLNP+R    L F +
Subjt:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRIGKLLMFPI

MBO8907936.1 hypothetical protein [Staphylococcus aureus]1.97e-2392.31Show/hide
Query:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI
        A TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLNP+ I
Subjt:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI

XP_008456149.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo]5.54e-2498.08Show/hide
Query:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI
        ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPI I
Subjt:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI

XP_011649071.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus]5.54e-2498.08Show/hide
Query:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI
        ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPI I
Subjt:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI

XP_011651239.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus]5.54e-2498.08Show/hide
Query:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI
        ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPI I
Subjt:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI

TrEMBL top hitse value%identityAlignment
A0A0A0L713 Uncharacterized protein4.6e-3367.16Show/hide
Query:  NKLNLAQMLNMTKIHVV--EPMVFLSFAFSGVGVLEFWRHCTNNFLLS------------TLFIWVVVIYRLNINEIVANEVYLFYLAMSNLTHFLSEIV
        N   LAQ++    + V   + +VFLSFAFSGVGVLEF RHCTNNFLLS             L IWVVVIYRLN NEIVANEVY FYLAMS++ +FLSEIV
Subjt:  NKLNLAQMLNMTKIHVV--EPMVFLSFAFSGVGVLEFWRHCTNNFLLS------------TLFIWVVVIYRLNINEIVANEVYLFYLAMSNLTHFLSEIV

Query:  DADATTLRLYLTCIRNTLEAAMCLQNFPCQEVER
        DADATTLRLYLTCIRNTLEAAMCLQ   C   ER
Subjt:  DADATTLRLYLTCIRNTLEAAMCLQNFPCQEVER

A0A0A0LHM5 Actin-related protein 2/3 complex subunit 45.0e-1998.08Show/hide
Query:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI
        ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPI I
Subjt:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI

A0A1R3HL56 ARP2/3 complex, 20kDa subunit (P20-Arc) (Fragment)1.1e-1871.43Show/hide
Query:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRIGKLLMFPIGTHFIYCGMSASAPMHN
        A TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTS+ELLLNP+    L    I T F+       A MHN
Subjt:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRIGKLLMFPIGTHFIYCGMSASAPMHN

A0A1S3C2N8 Actin-related protein 2/3 complex subunit 45.0e-1998.08Show/hide
Query:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI
        ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPI I
Subjt:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI

A0A446UXA2 Uncharacterized protein1.4e-1885Show/hide
Query:  THFLSEIVDADATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNP
        T F   +V   A TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNP
Subjt:  THFLSEIVDADATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNP

SwissProt top hitse value%identityAlignment
F4JUL9 Actin-related protein 2/3 complex subunit 46.2e-1986.54Show/hide
Query:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI
        A +LRLYL CI+NTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLNP+ I
Subjt:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI

O96625 Actin-related protein 2/3 complex subunit 48.7e-1372.92Show/hide
Query:  YLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRIGK
        YL CIRNTL A+MCLQNF  Q VERHNKPEVE+KTS EL+LNP+ I +
Subjt:  YLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRIGK

P59998 Actin-related protein 2/3 complex subunit 42.8e-1161.54Show/hide
Query:  TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRIGK
        TLR YL+ +R TL+AA+CL+NF  Q VERHNKPEVE+++S ELLL P+ I +
Subjt:  TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRIGK

P59999 Actin-related protein 2/3 complex subunit 42.8e-1161.54Show/hide
Query:  TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRIGK
        TLR YL+ +R TL+AA+CL+NF  Q VERHNKPEVE+++S ELLL P+ I +
Subjt:  TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRIGK

Q148J6 Actin-related protein 2/3 complex subunit 42.8e-1161.54Show/hide
Query:  TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRIGK
        TLR YL+ +R TL+AA+CL+NF  Q VERHNKPEVE+++S ELLL P+ I +
Subjt:  TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRIGK

Arabidopsis top hitse value%identityAlignment
AT4G14147.1 protein binding4.4e-2086.54Show/hide
Query:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI
        A +LRLYL CI+NTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLNP+ I
Subjt:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI

AT4G14147.2 protein binding4.4e-2086.54Show/hide
Query:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI
        A +LRLYL CI+NTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLNP+ I
Subjt:  ATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGTTTTGATCAAGTTAATTATTTTAATCCAATTAAATATTATTACTTGGGTTAAAGTTCAACTGAGTAAAAAAAATAAGCTTAATTTAGCCCAGATGCTAAATAT
GACCAAAATCCATGTGGTTGAGCCCATGGTGTTTCTTTCCTTTGCTTTCTCTGGCGTCGGAGTTTTGGAGTTTTGGCGGCATTGTACCAACAATTTCCTACTCTCAACAT
TGTTTATTTGGGTTGTGGTAATCTACCGCTTGAATATTAACGAGATCGTTGCGAATGAAGTTTATCTGTTTTACTTAGCAATGTCCAATTTAACTCACTTTCTTAGTGAA
ATTGTTGATGCTGATGCAACTACTTTACGCTTGTATTTGACGTGCATACGAAACACTCTTGAGGCCGCCATGTGCCTTCAGAATTTTCCTTGTCAAGAAGTTGAAAGACA
CAACAAGCCTGAAGTTGAACTAAAGACCAGCTCAGAACTTCTTCTCAATCCTATTAGAATTGGGAAACTGTTAATGTTCCCCATTGGAACGCATTTTATCTACTGTGGCA
TGTCAGCGTCAGCTCCTATGCATAATTTTCTAGTGATCCTTTTTTCCTTCCCTCTTTTTATTTTTTTCAATTGGAGATTCATGTTCATGCTAAAAGAGCATCCTTGGGAG
TTGGGAGTAGTTGGGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACCGTTTTGATCAAGTTAATTATTTTAATCCAATTAAATATTATTACTTGGGTTAAAGTTCAACTGAGTAAAAAAAATAAGCTTAATTTAGCCCAGATGCTAAATAT
GACCAAAATCCATGTGGTTGAGCCCATGGTGTTTCTTTCCTTTGCTTTCTCTGGCGTCGGAGTTTTGGAGTTTTGGCGGCATTGTACCAACAATTTCCTACTCTCAACAT
TGTTTATTTGGGTTGTGGTAATCTACCGCTTGAATATTAACGAGATCGTTGCGAATGAAGTTTATCTGTTTTACTTAGCAATGTCCAATTTAACTCACTTTCTTAGTGAA
ATTGTTGATGCTGATGCAACTACTTTACGCTTGTATTTGACGTGCATACGAAACACTCTTGAGGCCGCCATGTGCCTTCAGAATTTTCCTTGTCAAGAAGTTGAAAGACA
CAACAAGCCTGAAGTTGAACTAAAGACCAGCTCAGAACTTCTTCTCAATCCTATTAGAATTGGGAAACTGTTAATGTTCCCCATTGGAACGCATTTTATCTACTGTGGCA
TGTCAGCGTCAGCTCCTATGCATAATTTTCTAGTGATCCTTTTTTCCTTCCCTCTTTTTATTTTTTTCAATTGGAGATTCATGTTCATGCTAAAAGAGCATCCTTGGGAG
TTGGGAGTAGTTGGGGAATGACTTTTATATATTTATTCAAG
Protein sequenceShow/hide protein sequence
MTVLIKLIILIQLNIITWVKVQLSKKNKLNLAQMLNMTKIHVVEPMVFLSFAFSGVGVLEFWRHCTNNFLLSTLFIWVVVIYRLNINEIVANEVYLFYLAMSNLTHFLSE
IVDADATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPIRIGKLLMFPIGTHFIYCGMSASAPMHNFLVILFSFPLFIFFNWRFMFMLKEHPWE
LGVVGE