; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0010097 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010097
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L18a-like protein
Genome locationchr12:20156188..20159761
RNA-Seq ExpressionIVF0010097
SyntenyIVF0010097
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044804 - AT1G29970-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147407.1 60S ribosomal protein L18a-like protein [Cucumis sativus]5.58e-11598.74Show/hide
Query:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKS+VVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVA PVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

XP_008444018.1 PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo]1.17e-116100Show/hide
Query:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

XP_022140257.1 60S ribosomal protein L18a-like protein [Momordica charantia]8.18e-9986.16Show/hide
Query:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGK+S V GDP SQYHYGTFQGVANYY S  QPQPQPQP SVVGFPQPVAPP VSG  P YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+T G E W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

XP_022927552.1 60S ribosomal protein L18a-like protein [Cucurbita moschata]1.38e-9684.91Show/hide
Query:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSS VFGDP SQYHYGTFQGVANYY+S P+PQPQP PQSVVGFP  VAPP      PCYHGHL YQAVPVQGYAI+EGRPF EARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+AITFG++ GVE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

XP_038895475.1 60S ribosomal protein L18a-like protein [Benincasa hispida]2.13e-10089.31Show/hide
Query:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSS VFGDP SQYHYGTFQGVANYY+S     PQ QPQS VGFPQPV P  VSGH PCYHGHLGYQAVPVQGYAI+E RPF+EARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

TrEMBL top hitse value%identityAlignment
A0A0A0M051 Uncharacterized protein2.3e-8798.74Show/hide
Query:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKS+VVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVA PVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

A0A1S3B9D9 60S ribosomal protein L18a-like protein1.2e-88100Show/hide
Query:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

A0A6J1CGC1 60S ribosomal protein L18a-like protein4.5e-7586.16Show/hide
Query:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGK+S V GDP SQYHYGTFQGVANYY S  QPQPQPQP SVVGFPQPVAPP VSG  P YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+T G E W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

A0A6J1EHH7 60S ribosomal protein L18a-like protein3.2e-7384.91Show/hide
Query:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSS VFGDP SQYHYGTFQGVANYY+S P+PQPQP PQSVVGFP  VAPP      PCYHGHL YQAVPVQGYAI+EGRPF EARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+AITFG++ GVE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

A0A6J1KIR0 60S ribosomal protein L18a-like protein1.6e-7284.91Show/hide
Query:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MS DGKSS VFGDP SQYHYGTFQGVANYY+S PQPQPQP PQSVVGFP  VAPP      PCYHGHL YQAVPVQGYAI+EGRPF EARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+AITFG++ GVE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

SwissProt top hitse value%identityAlignment
Q8L9S1 60S ribosomal protein L18a-like protein2.2e-3151.05Show/hide
Query:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV
        QY+YGTFQGVAN+ T  P PQ       +  FP   A   + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFLF++GF  GGIPWY+
Subjt:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV

Query:  GAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        GAFIVL   VD+REK GYVAC+IASV+ +IA+  G+T  +  W
Subjt:  GAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

Arabidopsis top hitse value%identityAlignment
AT1G17080.1 Ribosomal protein L18ae family9.3e-4154.43Show/hide
Query:  DGKSSVVFGDPHSQYH-YGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFL
        + KS     +  +Q+H YGTFQGV+NY   PP     P    V GFPQP APP V      Y+ H GYQ VPV G  + EGRP ++ RLPCCGIG+GWFL
Subjt:  DGKSSVVFGDPHSQYH-YGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFL

Query:  FMIGFFLGGIPWYVGAFIVLF-VRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        F++GFFLG IPWYVG FI++F  R+DYREKPGY+AC IA++LA IA+  G++ G + W
Subjt:  FMIGFFLGGIPWYVGAFIVLF-VRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

AT1G29970.1 60S ribosomal protein L18A-11.6e-3251.05Show/hide
Query:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV
        QY+YGTFQGVAN+ T  P PQ       +  FP   A   + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFLF++GF  GGIPWY+
Subjt:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV

Query:  GAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        GAFIVL   VD+REK GYVAC+IASV+ +IA+  G+T  +  W
Subjt:  GAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

AT1G29970.2 60S ribosomal protein L18A-16.9e-2853.23Show/hide
Query:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV
        QY+YGTFQGVAN+ T  P PQ       +  FP   A   + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFLF++GF  GGIPWY+
Subjt:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV

Query:  GAFIVLFVRVDYREKPGYVACAIA
        GAFIVL   VD+REK GYVAC+IA
Subjt:  GAFIVLFVRVDYREKPGYVACAIA

AT1G29970.3 60S ribosomal protein L18A-12.2e-2639.46Show/hide
Query:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFL--------------
        QY+YGTFQGVAN+ T  P PQ       +  FP   A   + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFL              
Subjt:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFL--------------

Query:  ----------------------------FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
                                    F++GF  GGIPWY+GAFIVL   VD+REK GYVAC+IASV+ +IA+  G+T  +  W
Subjt:  ----------------------------FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

AT1G53560.1 Ribosomal protein L18ae family2.9e-3451.43Show/hide
Query:  YGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGAF
        YGTFQGV  Y   PP     P    V+G PQP  PP    H    H ++  +   V GY + +GRP ++ RLPCCG+G+GWFLF+IGF LG IPWYVG F
Subjt:  YGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGAF

Query:  IVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        I++  R+D REKPGYVAC IA+V+A I I FG+  G   W
Subjt:  IVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGCGACGGGAAAAGCAGCGTGGTATTCGGCGATCCACATAGTCAATACCATTACGGTACGTTTCAGGGTGTTGCGAACTATTATACTTCTCCTCCACAACCGCA
ACCGCAACCGCAGCCCCAATCTGTCGTCGGTTTCCCTCAGCCGGTTGCGCCACCCGTTGTTTCTGGTCATCAACCATGCTACCATGGTCATTTGGGTTACCAAGCTGTTC
CTGTTCAAGGTTATGCTATCCTTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTTATGATCGGCTTCTTTCTTGGT
GGCATTCCCTGGTATGTTGGAGCTTTTATTGTACTCTTTGTACGGGTCGATTACCGAGAAAAGCCTGGATATGTTGCGTGTGCAATTGCTTCAGTTCTTGCTGTCATTGC
TATAACATTTGGTATCACCAACGGAGTTGAGCCCTGGTGA
mRNA sequenceShow/hide mRNA sequence
GTACAAACTGCCAGCTGTACAACTCCACTTCACCAAAATCAGGAAACACCACCGCCTTATTAGAAACCGGAGACACCCATTCTCCTTTACGCCAAGCTCCGTCCACCCTC
CCTCCCAACTTTTCCGGCGAAATCGCAGAAGAAGAGAACTGCGACGACGAGACCTTCGCCGTCGTCTTGATATTCAAGAAACCCTCTCTGATTCTTCTTCTGCAAACAAT
ATGAGTGGCGACGGGAAAAGCAGCGTGGTATTCGGCGATCCACATAGTCAATACCATTACGGTACGTTTCAGGGTGTTGCGAACTATTATACTTCTCCTCCACAACCGCA
ACCGCAACCGCAGCCCCAATCTGTCGTCGGTTTCCCTCAGCCGGTTGCGCCACCCGTTGTTTCTGGTCATCAACCATGCTACCATGGTCATTTGGGTTACCAAGCTGTTC
CTGTTCAAGGTTATGCTATCCTTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTTATGATCGGCTTCTTTCTTGGT
GGCATTCCCTGGTATGTTGGAGCTTTTATTGTACTCTTTGTACGGGTCGATTACCGAGAAAAGCCTGGATATGTTGCGTGTGCAATTGCTTCAGTTCTTGCTGTCATTGC
TATAACATTTGGTATCACCAACGGAGTTGAGCCCTGGTGAAGGAAACATATGAAGAACAGTTTGGTCTGGTCAATACCGATGTCACCCTCCCTCTGTATCGAAAAAAACA
ACTGGTGGGATACTGTAATGAGCTTTTGAAATTGTTATTCTTTCAGTTTATATTTATCAACTTATTGGTTTCCTTTACCGTAAATATGTTGGAAACTTCCTGACTTGCCA
AAATTTGAAATGAAATGTTAATAGATTGAAGACAAAACTATTAGCTTTATTGGAAGGGGTTTTCTTTTTTATTATAATTATAAATTTCAGGA
Protein sequenceShow/hide protein sequence
MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLG
GIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW