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IVF0010105 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010105
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr05:17701770..17702048
RNA-Seq ExpressionIVF0010105
SyntenyIVF0010105
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047721.1 retrotransposon protein [Cucumis melo var. makuwa]9.51e-54100Show/hide
Query:  MGRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR
        MGRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR
Subjt:  MGRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR

KAA0064022.1 retrotransposon protein [Cucumis melo var. makuwa]1.10e-4992.31Show/hide
Query:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR
        GRFAETFA+VGSNEPGGGYDRFDMGDGNE+FPPVYSQG+D+SQDDVRASRPSRASEGRTGSSGSKRKRGSQ+DFDVE I LALDQTNEQLR
Subjt:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR

KAA0065692.1 retrotransposon protein [Cucumis melo var. makuwa]8.92e-5090.11Show/hide
Query:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR
        GRFAETFA+VGSNEPGGGYDRFDMGDGNE+FPPVYSQG+D+SQDDVRASRPSRASEGRTGSSGSKRKRGSQ+DF++E I LALDQTNEQLR
Subjt:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR

KAA0066208.1 retrotransposon protein [Cucumis melo var. makuwa]1.10e-4992.31Show/hide
Query:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR
        GRFAETFA+VGSNEPGGGYDRFDMGDGNE+FPPVYSQG+D+SQDDVRASRPSRASEGRTGSSGSKRKRGSQ+DFDVE I LALDQTNEQLR
Subjt:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR

TYK21946.1 retrotransposon protein [Cucumis melo var. makuwa]4.07e-5090.11Show/hide
Query:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR
        GRFAETFA+VGSNEPGGGYDRFDMGDGNE+FPPVYSQG+D+SQDDVRASRPSRASEGRTGSSGSKRKR SQ+DFDV+ I LALDQTNEQLR
Subjt:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR

TrEMBL top hitse value%identityAlignment
A0A5A7U2A0 Retrotransposon protein5.8e-43100Show/hide
Query:  MGRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR
        MGRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR
Subjt:  MGRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR

A0A5A7V480 Retrotransposon protein1.1e-3891.21Show/hide
Query:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR
        GRFAETFA+VGSNEPGGGYDRFDMGDGNE+FPPVYSQG+D+SQDDVRASRPSRASEG+TGSSGSKRKRGSQ+DFDVE I LALDQTNEQLR
Subjt:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR

A0A5A7V6Q9 Retrotransposon protein5.1e-3992.31Show/hide
Query:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR
        GRFAETFA+VGSNEPGGGYDRFDMGDGNE+FPPVYSQG+D+SQDDVRASRPSRASEGRTGSSGSKRKRGSQ+DFDVE I LALDQTNEQLR
Subjt:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR

A0A5A7VES2 Retrotransposon protein5.1e-3992.31Show/hide
Query:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR
        GRFAETFA+VGSNEPGGGYDRFDMGDGNE+FPPVYSQG+D+SQDDVRASRPSRASEGRTGSSGSKRKRGSQ+DFDVE I LALDQTNEQLR
Subjt:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR

A0A5A7VHM3 Retrotransposon protein8.7e-3991.21Show/hide
Query:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR
        GRFAETFA+VGSNEPGGGYDRFDMGDGNE+FPPVYSQG+D+SQDDVRASRPSRASEGRTGSSGSKRKRGSQ+DFDVE I L LDQTNEQLR
Subjt:  GRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGGTTCGCTGAGACATTCGCCGAAGTGGGGTCTAACGAGCCTGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAATGAGGAGTTTCCGCCCGTGTACAG
CCAGGGGATTGACCTCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAAGGTAGGACCGGATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCAAG
ACTTTGATGTTGAACCCATACTTCTAGCGCTCGACCAAACAAATGAGCAACTCAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCGGTTCGCTGAGACATTCGCCGAAGTGGGGTCTAACGAGCCTGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAATGAGGAGTTTCCGCCCGTGTACAG
CCAGGGGATTGACCTCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAAGGTAGGACCGGATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCAAG
ACTTTGATGTTGAACCCATACTTCTAGCGCTCGACCAAACAAATGAGCAACTCAGGTAG
Protein sequenceShow/hide protein sequence
MGRFAETFAEVGSNEPGGGYDRFDMGDGNEEFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEPILLALDQTNEQLR