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IVF0010108 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010108
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRHOMBOID-like protein 12, mitochondrial
Genome locationchr12:25025931..25027447
RNA-Seq ExpressionIVF0010108
SyntenyIVF0010108
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584400.1 RHOMBOID-like protein 12, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.96e-0542.86Show/hide
Query:  MNKLFSLSRNLASRLSNSFPTP--------------------------TLDI-DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI
        MNK FS  R LASRLSNS+                             T  + DHSRS     SF EKI+GFFS P  GKRFI N SNTLF+  +K +
Subjt:  MNKLFSLSRNLASRLSNSFPTP--------------------------TLDI-DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI

KGN64066.1 hypothetical protein Csa_013348 [Cucumis sativus]5.41e-7663.11Show/hide
Query:  MNKLFSLSRNLASRLSNSFPTPTLDIDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGSELKL-----------------------
        MN+LFSLSR LASRLSNSFPTPTLDIDHSRS    PSFAEKIYGF SVPAAGKRFIFN SNTLFRK L+QI SELKL                       
Subjt:  MNKLFSLSRNLASRLSNSFPTPTLDIDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGSELKL-----------------------

Query:  ---EIVKILTWLNQFSHFNFFVPNQRRHEWSRKFCHIASYILLPKFDSH-------------MHNSKQHKDSQFTMKNPERVL-----------------
           EIVK+LTWL+QFSHFNFFVP   R EWSRK  HIASYILLPKFD+              M NSKQHKDSQFTMKNPERVL                 
Subjt:  ---EIVKILTWLNQFSHFNFFVPNQRRHEWSRKFCHIASYILLPKFDSH-------------MHNSKQHKDSQFTMKNPERVL-----------------

Query:  --NDNQISRSIHLWGIAFPTSIRAL
          NDNQISRSIHLWG AFP SI AL
Subjt:  --NDNQISRSIHLWGIAFPTSIRAL

XP_004137444.1 RHOMBOID-like protein 12, mitochondrial [Cucumis sativus]3.39e-0636.43Show/hide
Query:  MNKLFSLSRNLASRLSNSFPTPTLDI----------------------------DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIG
        MNKLFS  R L SRLSNS+   +LD                             DHSRS     SFA+KI+GFFSVP  GKRFI N SNT F+  +K + 
Subjt:  MNKLFSLSRNLASRLSNSFPTPTLDI----------------------------DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIG

Query:  -----------SELKLEIVK--ILTWLNQFSHFNFFVPNQ
                   S+LK ++    +  W  + S F    PN+
Subjt:  -----------SELKLEIVK--ILTWLNQFSHFNFFVPNQ

XP_022923619.1 RHOMBOID-like protein 12, mitochondrial [Cucurbita moschata]1.16e-0537.12Show/hide
Query:  MNKLFSLSRNLASRLSNSFPTP--------------------------TLDI-DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGS
        MNK+FS  R LASRLSNS+                             T  + DHSRS     SF EKI+GFFS P  GKRFI N SNTLF+  +K +  
Subjt:  MNKLFSLSRNLASRLSNSFPTP--------------------------TLDI-DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGS

Query:  ELKLEIVKILTWLNQFSHFNFFVPNQRRHEWS
             + + L   + FS   F +     H WS
Subjt:  ELKLEIVKILTWLNQFSHFNFFVPNQRRHEWS

XP_023519071.1 RHOMBOID-like protein 12, mitochondrial [Cucurbita pepo subsp. pepo]6.26e-0638.64Show/hide
Query:  MNKLFSLSRNLASRLSNS------------FPTPTLD---------------IDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGS
        MNK FS  R LASRLSNS            F T  L                 DHSRS     SF EKI+GFFS P  GKRFI N SNTLF+  +K +  
Subjt:  MNKLFSLSRNLASRLSNS------------FPTPTLD---------------IDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGS

Query:  ELKLEIVKILTWLNQFSHFNFFVPNQRRHEWS
             + + L   + FS   F +     H WS
Subjt:  ELKLEIVKILTWLNQFSHFNFFVPNQRRHEWS

TrEMBL top hitse value%identityAlignment
A0A0A0LTI7 Rhomboid domain-containing protein2.3e-0536.43Show/hide
Query:  MNKLFSLSRNLASRLSNSFPTPTLDI----------------------------DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI-
        MNKLF  SR L SRLSNS+   +LD                             DHSRS     SFA+KI+GFFSVP  GKRFI N SNT F+  +K + 
Subjt:  MNKLFSLSRNLASRLSNSFPTPTLDI----------------------------DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI-

Query:  ----------GSELKLEIVK--ILTWLNQFSHFNFFVPNQ
                   S+LK ++    +  W  + S F    PN+
Subjt:  ----------GSELKLEIVK--ILTWLNQFSHFNFFVPNQ

A0A0A0LVM8 Uncharacterized protein1.6e-5963.11Show/hide
Query:  MNKLFSLSRNLASRLSNSFPTPTLDIDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGSELKL-----------------------
        MN+LFSLSR LASRLSNSFPTPTLDIDHSRS    PSFAEKIYGF SVPAAGKRFIFN SNTLFRK L+QI SELKL                       
Subjt:  MNKLFSLSRNLASRLSNSFPTPTLDIDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGSELKL-----------------------

Query:  ---EIVKILTWLNQFSHFNFFVPNQRRHEWSRKFCHIASYILLPKFD-------------SHMHNSKQHKDSQFTMKNPERVL-----------------
           EIVK+LTWL+QFSHFNFFVP   R EWSRK  HIASYILLPKFD             + M NSKQHKDSQFTMKNPERVL                 
Subjt:  ---EIVKILTWLNQFSHFNFFVPNQRRHEWSRKFCHIASYILLPKFD-------------SHMHNSKQHKDSQFTMKNPERVL-----------------

Query:  --NDNQISRSIHLWGIAFPTSIRAL
          NDNQISRSIHLWG AFP SI AL
Subjt:  --NDNQISRSIHLWGIAFPTSIRAL

A0A5D3BLA0 RHOMBOID-like protein 129.5e-0442.42Show/hide
Query:  MNKLFSLSRNLASRLSN----------------------------SFPTPTLDIDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI
        MNKLF  SR LASRLSN                            SF T  L  DHSRS     SF +KI+GFFSVP  GKR + N SNT F+  +K +
Subjt:  MNKLFSLSRNLASRLSN----------------------------SFPTPTLDIDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI

A0A6J1C609 RHOMBOID-like protein 12, mitochondrial7.3e-0440.82Show/hide
Query:  MNKLFSLSRNLASRLSNSFPT-----------------------------PTLDIDHSRSP--SFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI
        MNKLFSL   LASR+SNS  T                             P  D  HS S   SFAEKI+G FSV   GKRF+ N SNTLF+  ++ +
Subjt:  MNKLFSLSRNLASRLSNSFPT-----------------------------PTLDIDHSRSP--SFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI

A0A6J1E6X7 RHOMBOID-like protein 12, mitochondrial5.0e-0537.12Show/hide
Query:  MNKLFSLSRNLASRLSNSFPTP--------------------------TLDI-DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGS
        MNK+F  SR LASRLSNS+                             T  + DHSRS     SF EKI+GFFS P  GKRFI N SNTLF+  +K +  
Subjt:  MNKLFSLSRNLASRLSNSFPTP--------------------------TLDI-DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGS

Query:  ELKLEIVKILTWLNQFSHFNFFVPNQRRHEWS
             + + L   + FS   F +     H WS
Subjt:  ELKLEIVKILTWLNQFSHFNFFVPNQRRHEWS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAGCTCTTTTCTCTTTCTCGCAACCTTGCATCAAGGCTTTCGAATTCCTTTCCTACTCCAACTCTCGACATTGATCACTCCCGTTCACCAAGTTTTGCCGAGAA
AATTTATGGGTTTTTCTCAGTTCCGGCGGCCGGAAAGCGATTCATCTTCAATATTTCAAATACCCTTTTCAGGAAGGGTCTAAAACAAATTGGGTCTGAGTTGAAACTAG
AAATTGTGAAAATCCTAACTTGGTTAAATCAGTTCAGCCACTTCAATTTCTTTGTACCCAATCAGCGCAGGCACGAGTGGAGCCGTAAATTCTGTCATATTGCTTCATAT
ATTCTTCTTCCCAAATTTGACTCTCATATGCACAACTCTAAACAGCACAAAGATTCACAGTTCACTATGAAAAATCCTGAAAGAGTCCTTAATGACAACCAAATTTCAAG
ATCTATCCACTTGTGGGGTATTGCATTTCCAACCTCCATCCGTGCCCTTCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAGCTCTTTTCTCTTTCTCGCAACCTTGCATCAAGGCTTTCGAATTCCTTTCCTACTCCAACTCTCGACATTGATCACTCCCGTTCACCAAGTTTTGCCGAGAA
AATTTATGGGTTTTTCTCAGTTCCGGCGGCCGGAAAGCGATTCATCTTCAATATTTCAAATACCCTTTTCAGGAAGGGTCTAAAACAAATTGGGTCTGAGTTGAAACTAG
AAATTGTGAAAATCCTAACTTGGTTAAATCAGTTCAGCCACTTCAATTTCTTTGTACCCAATCAGCGCAGGCACGAGTGGAGCCGTAAATTCTGTCATATTGCTTCATAT
ATTCTTCTTCCCAAATTTGACTCTCATATGCACAACTCTAAACAGCACAAAGATTCACAGTTCACTATGAAAAATCCTGAAAGAGTCCTTAATGACAACCAAATTTCAAG
ATCTATCCACTTGTGGGGTATTGCATTTCCAACCTCCATCCGTGCCCTTCTCTGA
Protein sequenceShow/hide protein sequence
MNKLFSLSRNLASRLSNSFPTPTLDIDHSRSPSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGSELKLEIVKILTWLNQFSHFNFFVPNQRRHEWSRKFCHIASY
ILLPKFDSHMHNSKQHKDSQFTMKNPERVLNDNQISRSIHLWGIAFPTSIRALL