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IVF0010166 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010166
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSerine/arginine repetitive matrix protein 1-like
Genome locationchr11:25688599..25689366
RNA-Seq ExpressionIVF0010166
SyntenyIVF0010166
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR007592 - GLABROUS1 enhancer-binding protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037301.1 serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa]1.27e-159100Show/hide
Query:  MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA
        MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA
Subjt:  MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA

Query:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNE
        RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNE
Subjt:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNE

Query:  KWVLLHIEGAELKARRAALLKQQLKNYRD
        KWVLLHIEGAELKARRAALLKQQLKNYRD
Subjt:  KWVLLHIEGAELKARRAALLKQQLKNYRD

KAG6570827.1 hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sororia]1.16e-9267.11Show/hide
Query:  MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA
        MSTPHR  PSNASPETLT               HF++EDE+NLL  YLQI+RS NPT NS PTLDSPA DR++TA+ PKF++S IADKLHRLKL YHK A
Subjt:  MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA

Query:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNE
        RTKS IKTPH R+IL++GRSIWGK PT  T KPQ I   R + RRIKQRS + K+GV    DL +FPVL++EFS++FPGNGVW+EGLR MEEK+L+DMNE
Subjt:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNE

Query:  KWVLLHIEGAELKARRAALLKQQLK
        KWVLLHIE AELKARRAALL++QL+
Subjt:  KWVLLHIEGAELKARRAALLKQQLK

KAG6606028.1 hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sororia]1.98e-8163.88Show/hide
Query:  MSTPHRSLPSN---ASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYH
        MSTP RS PS    AS +     LT +Q N    Q+HFTDEDE++LL  YL+++ S    KNS PTLDSPA DR+ TA+G KF HS IADKLHRLK+ YH
Subjt:  MSTPHRSLPSN---ASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYH

Query:  KFARTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKD
        KFARTKSFIKTPH  +IL++GRSIWGK   P T KPQVIS      RRI+ RS  +K+GV    DLKNFPVLV+EFS+QFPGNGVWREGL+ MEE +LK 
Subjt:  KFARTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKD

Query:  MNEKWVLLHIEGAELKARRAALLKQQL
        MNEKWVLLHIE AELKARR AL+++Q+
Subjt:  MNEKWVLLHIEGAELKARRAALLKQQL

KGN46890.1 hypothetical protein Csa_020607 [Cucumis sativus]3.07e-13789.78Show/hide
Query:  MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA
        MST HRS PS+ASPETLT      Q NNQ DQLHF DEDEINLL SYLQISRSENPTKNSLPTLDS AFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA
Subjt:  MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA

Query:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNE
        RTKSFIKTPHQRQILDLGRSIWGKSPTP+TRKPQVISPSR+LSRRIKQRS TRKEGVGVD+DLKNFPVLVAEFS+QFPGNGVWR+GLRRM EKNLKDMNE
Subjt:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNE

Query:  KWVLLHIEGAELKARRAALLKQQLK
        KWVLLHIEGAELKARRAALLK+QL+
Subjt:  KWVLLHIEGAELKARRAALLKQQLK

XP_006424433.1 probable transcription factor At1g11510 [Citrus clementina]8.93e-3838.1Show/hide
Query:  TQPNNQTDQLHFTDEDEINLLKSYLQI-----SRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLG
        T PN +     FTD DEI LLK + ++     S S + T NS  TLDS +F+R+ +++G KF+H+ I DK+ RL++ YHK AR+KS IKTPH + +  + 
Subjt:  TQPNNQTDQLHFTDEDEINLLKSYLQI-----SRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLG

Query:  RSIWGKSPTPITRKPQVISPSRILS-----RRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNEKWVLLHIEGAELK
        + IWGK  T   ++ + +  S            K   +  +E  G ++D   +PVL  E S+  P N VWRE L+ +    LK+MN+KW+L+ IE A++ 
Subjt:  RSIWGKSPTPITRKPQVISPSRILS-----RRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNEKWVLLHIEGAELK

Query:  ARRAALLKQQ
        +++A L+K+Q
Subjt:  ARRAALLKQQ

TrEMBL top hitse value%identityAlignment
A0A0A0KAX7 Uncharacterized protein5.4e-10789.78Show/hide
Query:  MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA
        MST HRS PS+ASPE      TLTQ NNQ DQLHF DEDEINLL SYLQISRSENPTKNSLPTLDS AFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA
Subjt:  MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA

Query:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNE
        RTKSFIKTPHQRQILDLGRSIWGKSPTP+TRKPQVISPSR+LSRRIKQRS TRKEGVGVD+DLKNFPVLVAEFS+QFPGNGVWR+GLRRM EKNLKDMNE
Subjt:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNE

Query:  KWVLLHIEGAELKARRAALLKQQLK
        KWVLLHIEGAELKARRAALLK+QL+
Subjt:  KWVLLHIEGAELKARRAALLKQQLK

A0A2H5MZL8 Uncharacterized protein8.3e-3136.92Show/hide
Query:  TLTLTQPNNQTDQLHFTDEDEINLLKSYLQI-----SRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQI
        T  ++ P +Q  ++ FTD DEI LLK + ++     S S + T NS  TLDS +F+R+ +++G KF+H+ I DK+ RL++ YHK AR+KS +KTPH + +
Subjt:  TLTLTQPNNQTDQLHFTDEDEINLLKSYLQI-----SRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQI

Query:  LDLGRSIWGKSPTPITRKPQVISPSRIL-----SRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNEKWVLLHIEG
          + + IWGK  T   ++ + +  S            K   +  +E  G ++D   +PVL  E S+  P N VWRE L+ +    LK+MN+KW+L+ IE 
Subjt:  LDLGRSIWGKSPTPITRKPQVISPSRIL-----SRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNEKWVLLHIEG

Query:  AELKARRAALLKQQ
        A++ +++A L+K+Q
Subjt:  AELKARRAALLKQQ

A0A5A7T6T1 Serine/arginine repetitive matrix protein 1-like3.8e-124100Show/hide
Query:  MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA
        MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA
Subjt:  MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFA

Query:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNE
        RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNE
Subjt:  RTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKNLKDMNE

Query:  KWVLLHIEGAELKARRAALLKQQLKNYRD
        KWVLLHIEGAELKARRAALLKQQLKNYRD
Subjt:  KWVLLHIEGAELKARRAALLKQQLKNYRD

A0A5J5C8J5 Uncharacterized protein1.9e-3040.41Show/hide
Query:  TKPHRNSDPISIMSTP-----HRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHS
        T   R   P S  +TP     H+S    ASPE      T+T P +Q  +L FT+EDEI LLK++L+ ++S   TK+S   L S         +G +FS S
Subjt:  TKPHRNSDPISIMSTP-----HRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHS

Query:  VIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVW
         I DKL RL+  YHK ARTKSFIKTPH RQI ++   IWGK  T  +      SP R      +   +  + G   ++ L+NFPVL  E  + FP N V+
Subjt:  VIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVW

Query:  REGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLKNYR
        REGL+ +    L+ +NEKW+   +E A L A+RA L  +Q KN +
Subjt:  REGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLKNYR

A0A6P3Z773 probable transcription factor At1g617308.3e-3138.43Show/hide
Query:  SDPISIMSTPHRSLPSNASPETLTLTLTLTQPNNQT--------------DQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKF
        S PI++ S+  R+ PS+ SP T T T    QP++ +               Q  FT+EDE +LL+ +  I++S  P+      ++SP  DR++ ++G +F
Subjt:  SDPISIMSTPHRSLPSNASPETLTLTLTLTQPNNQT--------------DQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKF

Query:  SHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGN
        SH+ I DKL RL+L YHK ARTKS IKT H R++  + R IWG+            S SR   +  +++    ++ +G D+ L+ FPVL  E      GN
Subjt:  SHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGN

Query:  GVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQ
         VW++GL  +EEK LK +NEKW+LL +E AE+ A RA L K+
Subjt:  GVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAAAAATCTTTACCAGTCATTCACACTCTCGCCAGAACGAAACCCCACCGAAACTCCGATCCAATTTCCATCATGTCAACGCCCCACCGGTCACTCCCGTCCAA
CGCTTCTCCCGAAACCCTAACCCTAACCCTAACACTAACCCAACCCAACAATCAAACCGATCAACTTCATTTCACCGACGAAGACGAAATCAATCTCCTGAAGTCCTACC
TCCAAATCTCCAGATCCGAAAACCCCACAAAGAATTCTCTCCCCACTCTCGATTCTCCGGCCTTCGACCGCCTTCAGACCGCCGTCGGCCCCAAATTCTCACACTCCGTC
ATCGCCGATAAGCTCCACCGCCTCAAACTCCTGTACCACAAATTCGCAAGAACAAAGTCCTTCATCAAAACTCCTCACCAACGTCAGATCCTCGACCTCGGCCGCAGCAT
CTGGGGAAAATCCCCCACACCTATAACAAGAAAACCACAGGTAATTTCACCTTCAAGGATACTTTCACGAAGAATCAAACAGAGATCAAGCACTAGAAAAGAAGGGGTTG
GGGTGGATATTGATCTGAAGAACTTTCCTGTTCTTGTGGCTGAATTTTCTCAGCAGTTTCCGGGGAATGGGGTGTGGAGAGAAGGGCTGAGGAGAATGGAGGAGAAGAAT
TTGAAGGATATGAATGAGAAATGGGTTTTGTTGCATATTGAAGGGGCTGAGCTTAAGGCAAGAAGGGCTGCTTTATTAAAGCAGCAACTTAAGAACTACAGAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTAAAAAATCTTTACCAGTCATTCACACTCTCGCCAGAACGAAACCCCACCGAAACTCCGATCCAATTTCCATCATGTCAACGCCCCACCGGTCACTCCCGTCCAA
CGCTTCTCCCGAAACCCTAACCCTAACCCTAACACTAACCCAACCCAACAATCAAACCGATCAACTTCATTTCACCGACGAAGACGAAATCAATCTCCTGAAGTCCTACC
TCCAAATCTCCAGATCCGAAAACCCCACAAAGAATTCTCTCCCCACTCTCGATTCTCCGGCCTTCGACCGCCTTCAGACCGCCGTCGGCCCCAAATTCTCACACTCCGTC
ATCGCCGATAAGCTCCACCGCCTCAAACTCCTGTACCACAAATTCGCAAGAACAAAGTCCTTCATCAAAACTCCTCACCAACGTCAGATCCTCGACCTCGGCCGCAGCAT
CTGGGGAAAATCCCCCACACCTATAACAAGAAAACCACAGGTAATTTCACCTTCAAGGATACTTTCACGAAGAATCAAACAGAGATCAAGCACTAGAAAAGAAGGGGTTG
GGGTGGATATTGATCTGAAGAACTTTCCTGTTCTTGTGGCTGAATTTTCTCAGCAGTTTCCGGGGAATGGGGTGTGGAGAGAAGGGCTGAGGAGAATGGAGGAGAAGAAT
TTGAAGGATATGAATGAGAAATGGGTTTTGTTGCATATTGAAGGGGCTGAGCTTAAGGCAAGAAGGGCTGCTTTATTAAAGCAGCAACTTAAGAACTACAGAGACTAA
Protein sequenceShow/hide protein sequence
MTKKSLPVIHTLARTKPHRNSDPISIMSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNSLPTLDSPAFDRLQTAVGPKFSHSV
IADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGNGVWREGLRRMEEKN
LKDMNEKWVLLHIEGAELKARRAALLKQQLKNYRD