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IVF0010195 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010195
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr01:9078696..9079437
RNA-Seq ExpressionIVF0010195
SyntenyIVF0010195
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040417.1 uncharacterized protein E6C27_scaffold35G00400 [Cucumis melo var. makuwa]7.45e-7269.52Show/hide
Query:  MRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLAS------PPIDNQQSVLDPDPMGQSCNN
        MRGH FKSTPSRRPY LLS+KNQVTL DSSS+S+HDENVAG   +N++ E VVSES+MSEMDS+ERD+V LA       PPID QQSV DPD + QS +N
Subjt:  MRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLAS------PPIDNQQSVLDPDPMGQSCNN

Query:  ADENIYENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKTGMKKIPPNIPSIPIDGISFHLEESVQQ
          ENI+ENVG+HVE  +NSAP+ VEPNE+VPPTE EQPRAD K K  KTQ+   MVTTKTG KKI PNIPS+PIDGISF L+ESVQ+
Subjt:  ADENIYENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKTGMKKIPPNIPSIPIDGISFHLEESVQQ

KAA0046513.1 uncharacterized protein E6C27_scaffold114G00110 [Cucumis melo var. makuwa]8.80e-6858.15Show/hide
Query:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLAS----------------------
        MHG+RMRGH+FKSTPSRRPY L  +KNQV LFDSS++SVHDE + GI AENVE E VVS+SHMSEMDSNERDDV L S                      
Subjt:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLAS----------------------

Query:  -----------PPIDNQQSVLDPDPMGQSCNNADENIYEN--------VGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKT
                      D Q SV DP+P+GQS  N DEN+  N        VG+HVE  DN AP DVEPN N P T+SEQP ADPK KGKK QQ+   +TTK 
Subjt:  -----------PPIDNQQSVLDPDPMGQSCNNADENIYEN--------VGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKT

Query:  GMKKIPPNIPSIPIDGISFHLEESVQQ
        G KKIPPNIP  PIDGISFHLEESVQ+
Subjt:  GMKKIPPNIPSIPIDGISFHLEESVQQ

KAA0055436.1 uncharacterized protein E6C27_scaffold221G00060 [Cucumis melo var. makuwa]1.35e-97100Show/hide
Query:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLASPPIDNQQSVLDPDPMGQSCNNA
        MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLASPPIDNQQSVLDPDPMGQSCNNA
Subjt:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLASPPIDNQQSVLDPDPMGQSCNNA

Query:  DENIYENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRM
        DENIYENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRM
Subjt:  DENIYENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRM

XP_008450476.1 PREDICTED: uncharacterized protein LOC103492069 [Cucumis melo]1.08e-6158.72Show/hide
Query:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLAS----------------------
        MHG+RMRGH+ KST SRRP RL S+KN+V LFDSSS+S+HDENVAGI A+N+E E VVSESHMSE+DS+E+DDV LAS                      
Subjt:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLAS----------------------

Query:  ---PPIDNQQSVLDPDPMGQSCNNADENIYENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKTGMKKIPPNIPSIPI--
           PPID QQSVLDPD + Q   N  ENI+ENVGEHVE  DNSAPD VEPNE+VP TE EQP ADPK K K TQQS RMVTTKTG KKI       P+  
Subjt:  ---PPIDNQQSVLDPDPMGQSCNNADENIYENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKTGMKKIPPNIPSIPI--

Query:  ----------DGISFHLE
                  DGI+F  E
Subjt:  ----------DGISFHLE

XP_008462765.1 PREDICTED: uncharacterized protein LOC103501050 [Cucumis melo]3.78e-6657.78Show/hide
Query:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLAS----------------------
        MHG+RMRGH+FKSTPSRRPY L  +KNQV LFDSS++SVHDE + GI AENVE E VVS+SHMSEMDSNERDDV L S                      
Subjt:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLAS----------------------

Query:  -----------PPIDNQQSVLDPDPMGQSCNNADENIYEN--------VGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKT
                      D Q SV DP+P+GQS  N DEN+  N        VG+HVE  DN AP DVEPN N P T+SEQP ADPK KGKK QQ+   +TTK 
Subjt:  -----------PPIDNQQSVLDPDPMGQSCNNADENIYEN--------VGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKT

Query:  GMKKIPPNIPSIPIDGISFHLEESV
        G KKIPPNIP  PIDGISFHLEES+
Subjt:  GMKKIPPNIPSIPIDGISFHLEESV

TrEMBL top hitse value%identityAlignment
A0A1S3CHR6 uncharacterized protein LOC1035010508.7e-5457.78Show/hide
Query:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSL------------------------
        MHG+RMRGH+FKSTPSRRPY L  +KNQV LFDSS++SVHDE + GI AENVE E VVS+SHMSEMDSNERDDV L                        
Subjt:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSL------------------------

Query:  ---------ASPPIDNQQSVLDPDPMGQSCNNADENIY--------ENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKT
                  S   D Q SV DP+P+GQS  N DEN+         E+VG+HVE  DN AP DVEPN N P T+SEQP ADPK KGKK QQ+   +TTK 
Subjt:  ---------ASPPIDNQQSVLDPDPMGQSCNNADENIY--------ENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKT

Query:  GMKKIPPNIPSIPIDGISFHLEESV
        G KKIPPNIP  PIDGISFHLEES+
Subjt:  GMKKIPPNIPSIPIDGISFHLEESV

A0A5A7TFT6 Uncharacterized protein1.3e-5769.52Show/hide
Query:  MRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLA------SPPIDNQQSVLDPDPMGQSCNN
        MRGH FKSTPSRRPY LLS+KNQVTL DSSS+S+HDENVAG   +N++ E VVSES+MSEMDS+ERD+V LA       PPID QQSV DPD + QS +N
Subjt:  MRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLA------SPPIDNQQSVLDPDPMGQSCNN

Query:  ADENIYENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKTGMKKIPPNIPSIPIDGISFHLEESVQQ
          ENI+ENVG+HVE  +NSAP+ VEPNE+VPPTE EQPRAD K K  KTQ+   MVTTKTG KKI PNIPS+PIDGISF L+ESVQ+
Subjt:  ADENIYENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKTGMKKIPPNIPSIPIDGISFHLEESVQQ

A0A5A7TSJ3 Uncharacterized protein7.9e-5558.15Show/hide
Query:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSL------------------------
        MHG+RMRGH+FKSTPSRRPY L  +KNQV LFDSS++SVHDE + GI AENVE E VVS+SHMSEMDSNERDDV L                        
Subjt:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSL------------------------

Query:  ---------ASPPIDNQQSVLDPDPMGQSCNNADENIY--------ENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKT
                  S   D Q SV DP+P+GQS  N DEN+         E+VG+HVE  DN AP DVEPN N P T+SEQP ADPK KGKK QQ+   +TTK 
Subjt:  ---------ASPPIDNQQSVLDPDPMGQSCNNADENIY--------ENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKT

Query:  GMKKIPPNIPSIPIDGISFHLEESVQQ
        G KKIPPNIP  PIDGISFHLEESVQ+
Subjt:  GMKKIPPNIPSIPIDGISFHLEESVQQ

A0A5A7UJJ1 Uncharacterized protein1.5e-5064.55Show/hide
Query:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLA-----------------------
        MHG+RMRGH+ KST SRRP RL S+KN+V LFDSSS+S+HDENVAGI A+N+E E VVSESHMSE+DS+E+DDV LA                       
Subjt:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLA-----------------------

Query:  --SPPIDNQQSVLDPDPMGQSCNNADENIYENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKTGMKKI
          SPPID QQSVLDPD + Q   N  ENI+ENVGEHVE  DNSAPD VEPNE+VP TE EQP ADPK K K TQQS RMVTTKTG KKI
Subjt:  --SPPIDNQQSVLDPDPMGQSCNNADENIYENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKTGMKKI

A0A5D3CCK2 Uncharacterized protein1.1e-77100Show/hide
Query:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLASPPIDNQQSVLDPDPMGQSCNNA
        MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLASPPIDNQQSVLDPDPMGQSCNNA
Subjt:  MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLASPPIDNQQSVLDPDPMGQSCNNA

Query:  DENIYENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRM
        DENIYENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRM
Subjt:  DENIYENVGEHVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGGCATTCGAATGAGGGGCCATCAATTTAAAAGCACTCCTTCTCGAAGACCTTATCGTCTATTGTCTAAAAAGAATCAGGTAACTCTTTTTGATAGCTCAAGTAT
GTCTGTGCATGATGAGAATGTTGCTGGTATTTCTGCTGAGAATGTCGAATTTGAACTAGTTGTCTCTGAGTCTCATATGTCTGAAATGGATTCGAATGAAAGGGATGATG
TTTCACTAGCTAGTCCACCTATTGATAACCAACAGTCTGTTCTTGATCCTGATCCTATGGGTCAGTCTTGTAATAATGCTGATGAGAACATTTATGAAAATGTTGGTGAG
CATGTTGAACTAATTGATAATAGTGCACCTGATGATGTTGAACCAAATGAGAATGTTCCTCCAACTGAATCTGAACAACCTCGTGCTGACCCTAAACCAAAAGGGAAGAA
AACACAACAGAGTCATCGTATGGTCACTACAAAAACTGGGATGAAGAAGATACCACCAAATATTCCATCTATACCAATTGATGGAATCTCATTTCATCTCGAAGAAAGTG
TGCAACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCATGGCATTCGAATGAGGGGCCATCAATTTAAAAGCACTCCTTCTCGAAGACCTTATCGTCTATTGTCTAAAAAGAATCAGGTAACTCTTTTTGATAGCTCAAGTAT
GTCTGTGCATGATGAGAATGTTGCTGGTATTTCTGCTGAGAATGTCGAATTTGAACTAGTTGTCTCTGAGTCTCATATGTCTGAAATGGATTCGAATGAAAGGGATGATG
TTTCACTAGCTAGTCCACCTATTGATAACCAACAGTCTGTTCTTGATCCTGATCCTATGGGTCAGTCTTGTAATAATGCTGATGAGAACATTTATGAAAATGTTGGTGAG
CATGTTGAACTAATTGATAATAGTGCACCTGATGATGTTGAACCAAATGAGAATGTTCCTCCAACTGAATCTGAACAACCTCGTGCTGACCCTAAACCAAAAGGGAAGAA
AACACAACAGAGTCATCGTATGGTCACTACAAAAACTGGGATGAAGAAGATACCACCAAATATTCCATCTATACCAATTGATGGAATCTCATTTCATCTCGAAGAAAGTG
TGCAACAATGA
Protein sequenceShow/hide protein sequence
MHGIRMRGHQFKSTPSRRPYRLLSKKNQVTLFDSSSMSVHDENVAGISAENVEFELVVSESHMSEMDSNERDDVSLASPPIDNQQSVLDPDPMGQSCNNADENIYENVGE
HVELIDNSAPDDVEPNENVPPTESEQPRADPKPKGKKTQQSHRMVTTKTGMKKIPPNIPSIPIDGISFHLEESVQQ