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IVF0010201 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010201
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLPS-induced tumor necrosis factor alpha factor
Genome locationchr02:18696643..18696819
RNA-Seq ExpressionIVF0010201
SyntenyIVF0010201
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054811.1 hypothetical protein E6C27_scaffold437G00990 [Cucumis melo var. makuwa]1.24e-0866.67Show/hide
Query:  MGAVLGALRMAAGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILG
        MG V   L+MA  C  AVA GASV+M VAP LTPVVAP+MA  TVATSV GV  ILG
Subjt:  MGAVLGALRMAAGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILG

KAA0068093.1 LPS-induced tumor necrosis factor alpha factor [Cucumis melo var. makuwa]6.61e-0772.34Show/hide
Query:  AGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILGI
        A C   VA GASV+M VAP LTPVVAP+MA ATVATS+ GV GILGI
Subjt:  AGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILGI

KGN65426.1 hypothetical protein Csa_019847 [Cucumis sativus]5.90e-0559.62Show/hide
Query:  ALRMAAGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILGI
        AL++AA C  AVA  ++V+M VAP L PVVAP+M  ATV TSV GV  I GI
Subjt:  ALRMAAGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILGI

TYJ99647.1 hypothetical protein E5676_scaffold562G00240 [Cucumis melo var. makuwa]6.13e-0966.67Show/hide
Query:  MGAVLGALRMAAGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILG
        MG V   L+MA  C  AVA GASV+M VAP LTPVVAP+MA  TVATSV GV  ILG
Subjt:  MGAVLGALRMAAGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILG

TYK09492.1 hypothetical protein E5676_scaffold499G00920 [Cucumis melo var. makuwa]1.68e-0661.4Show/hide
Query:  MGAVLGALRMAAGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILG
        M  V  AL+MAA C  AVA GASV+M VAP LTPVVAP+M  A V TSV  V  +LG
Subjt:  MGAVLGALRMAAGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILG

TrEMBL top hitse value%identityAlignment
A0A5A7UMM6 Uncharacterized protein5.2e-0566.67Show/hide
Query:  MGAVLGALRMAAGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILG
        MG V   L+MA  C  AVA GASV+M VAP LTPVVAP+MA  TVATSV GV  ILG
Subjt:  MGAVLGALRMAAGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILG

A0A5D3BKI7 Uncharacterized protein3.0e-0566.67Show/hide
Query:  MGAVLGALRMAAGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILG
        MG V   L+MA  C  AVA GASV+M VAP LTPVVAP+MA  TVATSV GV  ILG
Subjt:  MGAVLGALRMAAGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILG

A0A5D3DRF6 LPS-induced tumor necrosis factor alpha factor8.8e-0572.34Show/hide
Query:  AGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILGI
        A C   VA GASV+M VAP LTPVVAP+MA ATVATS+ GV GILGI
Subjt:  AGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTGTTTTGGGAGCTTTGAGGATGGCGGCTGGTTGTGTTGTGGCCGTGGCAAGGGGTGCATCAGTGATTATGATGGTGGCACCAACTCTGACCCCTGTTGTTGC
TCCTCTCATGGCTGTAGCCACTGTTGCTACGTCGGTCAATGGTGTTACGGGGATTTTAGGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCTGTTTTGGGAGCTTTGAGGATGGCGGCTGGTTGTGTTGTGGCCGTGGCAAGGGGTGCATCAGTGATTATGATGGTGGCACCAACTCTGACCCCTGTTGTTGC
TCCTCTCATGGCTGTAGCCACTGTTGCTACGTCGGTCAATGGTGTTACGGGGATTTTAGGAATTTGA
Protein sequenceShow/hide protein sequence
MGAVLGALRMAAGCVVAVARGASVIMMVAPTLTPVVAPLMAVATVATSVNGVTGILGI