; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0010213 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010213
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr06:3587321..3587698
RNA-Seq ExpressionIVF0010213
SyntenyIVF0010213
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032462.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]3.88e-7291.74Show/hide
Query:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT
        MEIIREGPSASR PVLDGKNY YWKPRMIFFIKTLDGK WRALVGGYEPPM+TVNGV VPKPE+DW DAE QASVGNARAINAIFN VDLN FKLINSCT
Subjt:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT

Query:  TAKEAWKILEVAYEGTSKVKI
        TAKEAWKILEVAYEGTSKVKI
Subjt:  TAKEAWKILEVAYEGTSKVKI

KAA0039062.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.88e-8697.6Show/hide
Query:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT
        MEIIREGPSASRPPVLDGKNY YWKPRMIFFIKTLDGK WRALVGGYEPPMITVNGVLVPKPEIDW DAEGQASVGNARAINAIFNDVDLNVFKLINSCT
Subjt:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT

Query:  TAKEAWKILEVAYEGTSKVKILDCS
        TAKEAWKILEVAYEGTSKVKILDCS
Subjt:  TAKEAWKILEVAYEGTSKVKILDCS

KAA0043414.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.50e-7289.26Show/hide
Query:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT
        MEIIREGPSASRPPVLDGKNYFYWKP MIFFIKTLDGK W  LVGGYEPPM+TVNGVLVPKPEID  D E Q SVGNARAINAIFN VDLNVFKLINS T
Subjt:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT

Query:  TAKEAWKILEVAYEGTSKVKI
         AKEAWKILEVAYEGTSKVKI
Subjt:  TAKEAWKILEVAYEGTSKVKI

TYJ98296.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.51e-7388.43Show/hide
Query:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT
        MEIIREGPSASRP VLDGKNYFYWKP MIFFI TLDGK W   VGGYEPPM+TVNGVLVPKPEIDW D E Q SVGNARAINAIFN VDL+VFKLINSCT
Subjt:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT

Query:  TAKEAWKILEVAYEGTSKVKI
        TAKEAWKILEVAYEGTSKVKI
Subjt:  TAKEAWKILEVAYEGTSKVKI

TYJ99744.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.11e-89100Show/hide
Query:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT
        MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT
Subjt:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT

Query:  TAKEAWKILEVAYEGTSKVKILDCS
        TAKEAWKILEVAYEGTSKVKILDCS
Subjt:  TAKEAWKILEVAYEGTSKVKILDCS

TrEMBL top hitse value%identityAlignment
A0A5A7T6E6 Gag-pol polyprotein1.5e-6597.6Show/hide
Query:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT
        MEIIREGPSASRPPVLDGKNY YWKPRMIFFIKTLDGK WRALVGGYEPPMITVNGVLVPKPEIDW DAEGQASVGNARAINAIFNDVDLNVFKLINSCT
Subjt:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT

Query:  TAKEAWKILEVAYEGTSKVKILDCS
        TAKEAWKILEVAYEGTSKVKILDCS
Subjt:  TAKEAWKILEVAYEGTSKVKILDCS

A0A5A7TCV9 Gag-pol polyprotein2.8e-5687.6Show/hide
Query:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT
        MEIIREGPSASR P+LDGKNY YWKPRMIFFIK LDGK WRALV GY+PPMITVNGVLVPKPE+DW DAE QASVGNARA+NAIFN VDLNVFKLINSC+
Subjt:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT

Query:  TAKEAWKILEVAYEGTSKVKI
        T+KEAWK LEVAYEGTSKVKI
Subjt:  TAKEAWKILEVAYEGTSKVKI

A0A5D3BGY8 Gag-pol polyprotein4.8e-5688.43Show/hide
Query:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT
        MEIIREGPSASRP VLDGKNYFYWKP MIFFI TLDGK W   VGGYEPPM+TVNGVLVPKPEIDW D E Q SVGNARAINAIFN VDL+VFKLINSCT
Subjt:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT

Query:  TAKEAWKILEVAYEGTSKVKI
        TAKEAWKILEVAYEGTSKVKI
Subjt:  TAKEAWKILEVAYEGTSKVKI

A0A5D3BL43 Gag-pol polyprotein7.1e-68100Show/hide
Query:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT
        MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT
Subjt:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT

Query:  TAKEAWKILEVAYEGTSKVKILDCS
        TAKEAWKILEVAYEGTSKVKILDCS
Subjt:  TAKEAWKILEVAYEGTSKVKILDCS

A0A5D3D1H0 Gag-proteinase polyprotein3.0e-5891.74Show/hide
Query:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT
        MEIIREGPSASR PVLDGKNY YWKPRMIFFIKTLDGK WRALVGGYEPPM+TVNGV VPKPE+DW DAE QASVGNARAINAIFN VDLN FKLINSCT
Subjt:  MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCT

Query:  TAKEAWKILEVAYEGTSKVKI
        TAKEAWKILEVAYEGTSKVKI
Subjt:  TAKEAWKILEVAYEGTSKVKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATAATCAGAGAAGGACCATCAGCTTCACGTCCTCCTGTACTGGACGGTAAAAATTACTTTTATTGGAAGCCTCGCATGATATTTTTCATTAAAACCTTGGATGG
AAAAGAATGGAGAGCACTTGTTGGTGGTTATGAACCTCCAATGATTACTGTGAATGGAGTATTAGTGCCAAAACCAGAAATTGACTGGAAAGATGCTGAAGGACAAGCTT
CAGTTGGAAATGCAAGAGCCATAAATGCTATCTTCAATGATGTCGATTTAAACGTGTTCAAACTTATTAATTCCTGCACTACTGCTAAAGAGGCGTGGAAAATACTGGAA
GTTGCATATGAAGGAACTTCTAAAGTGAAGATTCTAGACTGTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATAATCAGAGAAGGACCATCAGCTTCACGTCCTCCTGTACTGGACGGTAAAAATTACTTTTATTGGAAGCCTCGCATGATATTTTTCATTAAAACCTTGGATGG
AAAAGAATGGAGAGCACTTGTTGGTGGTTATGAACCTCCAATGATTACTGTGAATGGAGTATTAGTGCCAAAACCAGAAATTGACTGGAAAGATGCTGAAGGACAAGCTT
CAGTTGGAAATGCAAGAGCCATAAATGCTATCTTCAATGATGTCGATTTAAACGTGTTCAAACTTATTAATTCCTGCACTACTGCTAAAGAGGCGTGGAAAATACTGGAA
GTTGCATATGAAGGAACTTCTAAAGTGAAGATTCTAGACTGTAGTTGA
Protein sequenceShow/hide protein sequence
MEIIREGPSASRPPVLDGKNYFYWKPRMIFFIKTLDGKEWRALVGGYEPPMITVNGVLVPKPEIDWKDAEGQASVGNARAINAIFNDVDLNVFKLINSCTTAKEAWKILE
VAYEGTSKVKILDCS