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IVF0010242 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010242
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionClavata3/ESR (CLE) gene family member
Genome locationchr02:19772281..19772612
RNA-Seq ExpressionIVF0010242
SyntenyIVF0010242
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058189.1 Clavata3/ESR (CLE) protein [Cucumis melo var. makuwa]6.07e-5887.27Show/hide
Query:  MSGAMGLSKSSILVFWLSVLVVCVTSVA--------------DNKNSLTTTPGETTINRCKYSKNNANDLHCCECFFLSSKKMMMMINNNNGTNFEDKRV
        MSGAMGLSKSSILVFWLSVLVVCVTSVA              DNKNSLTTTPGETTINRCKYSKNNANDLHCCECFFLSSKKMMMMINNNNGTNFEDKRV
Subjt:  MSGAMGLSKSSILVFWLSVLVVCVTSVA--------------DNKNSLTTTPGETTINRCKYSKNNANDLHCCECFFLSSKKMMMMINNNNGTNFEDKRV

Query:  VPTGPNPLHN
        VPTGPNPLHN
Subjt:  VPTGPNPLHN

KAG6587715.1 hypothetical protein SDJN03_16280, partial [Cucurbita argyrosperma subsp. sororia]2.83e-1146.6Show/hide
Query:  MGLSKSSILVFWLSVLVVCVTSVADNKNSLTTTPGETTIN-----------RCKYSKNNANDLHCCECFFLSSKKMMMMINNNNGTNFEDKRVVPTGPNP
        M L++SSILV  LSV  VC+ SV   +  L      T  N           RCK  K     L+CCECFF SS+KM+    NN  ++ E+KRVVPTGPNP
Subjt:  MGLSKSSILVFWLSVLVVCVTSVADNKNSLTTTPGETTIN-----------RCKYSKNNANDLHCCECFFLSSKKMMMMINNNNGTNFEDKRVVPTGPNP

Query:  LHN
        LHN
Subjt:  LHN

KGN65507.1 hypothetical protein Csa_019832 [Cucumis sativus]1.22e-4880.18Show/hide
Query:  MSGAMGLSKSSILVFWLSVLVVCVTSVA--------------DNKNSLTTTPGETTINRCKYSKNN-ANDLHCCECFFLSSKKMMMMINNNNGTNFEDKR
        MSGAMGLSKSSIL+FWLSVLVVCVTSVA              DNKNSLTTT  ETTINRCKYSKNN  NDLHCCECFFLSSKKMMM I+NNNGTNFE+KR
Subjt:  MSGAMGLSKSSILVFWLSVLVVCVTSVA--------------DNKNSLTTTPGETTINRCKYSKNN-ANDLHCCECFFLSSKKMMMMINNNNGTNFEDKR

Query:  VVPTGPNPLHN
        VVPTGPNPLHN
Subjt:  VVPTGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0LXI1 Uncharacterized protein2.9e-3780.18Show/hide
Query:  MSGAMGLSKSSILVFWLSVLVVCVTSVA--------------DNKNSLTTTPGETTINRCKYSKNN-ANDLHCCECFFLSSKKMMMMINNNNGTNFEDKR
        MSGAMGLSKSSIL+FWLSVLVVCVTSVA              DNKNSLTTT  ETTINRCKYSKNN  NDLHCCECFFLSSKK MMMI+NNNGTNFE+KR
Subjt:  MSGAMGLSKSSILVFWLSVLVVCVTSVA--------------DNKNSLTTTPGETTINRCKYSKNN-ANDLHCCECFFLSSKKMMMMINNNNGTNFEDKR

Query:  VVPTGPNPLHN
        VVPTGPNPLHN
Subjt:  VVPTGPNPLHN

A0A5A7UXE2 Clavata3/ESR (CLE) gene family member2.5e-4487.27Show/hide
Query:  MSGAMGLSKSSILVFWLSVLVVCVTSVA--------------DNKNSLTTTPGETTINRCKYSKNNANDLHCCECFFLSSKKMMMMINNNNGTNFEDKRV
        MSGAMGLSKSSILVFWLSVLVVCVTSVA              DNKNSLTTTPGETTINRCKYSKNNANDLHCCECFFLSSKKMMMMINNNNGTNFEDKRV
Subjt:  MSGAMGLSKSSILVFWLSVLVVCVTSVA--------------DNKNSLTTTPGETTINRCKYSKNNANDLHCCECFFLSSKKMMMMINNNNGTNFEDKRV

Query:  VPTGPNPLHN
        VPTGPNPLHN
Subjt:  VPTGPNPLHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGGTGCAATGGGACTATCCAAGTCTAGCATTTTGGTGTTTTGGCTTTCGGTTTTAGTCGTTTGTGTTACCTCCGTCGCGGACAACAAAAACAGCTTAACAACTAC
ACCGGGGGAGACGACAATCAACCGGTGCAAGTACTCGAAGAACAACGCTAACGACCTCCATTGTTGTGAGTGCTTCTTCTTGAGCTCTAAGAAGATGATGATGATGATCA
ATAATAATAATGGCACCAATTTTGAAGATAAAAGGGTTGTTCCTACTGGACCTAACCCACTTCACAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGGTGCAATGGGACTATCCAAGTCTAGCATTTTGGTGTTTTGGCTTTCGGTTTTAGTCGTTTGTGTTACCTCCGTCGCGGACAACAAAAACAGCTTAACAACTAC
ACCGGGGGAGACGACAATCAACCGGTGCAAGTACTCGAAGAACAACGCTAACGACCTCCATTGTTGTGAGTGCTTCTTCTTGAGCTCTAAGAAGATGATGATGATGATCA
ATAATAATAATGGCACCAATTTTGAAGATAAAAGGGTTGTTCCTACTGGACCTAACCCACTTCACAATTAA
Protein sequenceShow/hide protein sequence
MSGAMGLSKSSILVFWLSVLVVCVTSVADNKNSLTTTPGETTINRCKYSKNNANDLHCCECFFLSSKKMMMMINNNNGTNFEDKRVVPTGPNPLHN