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IVF0010246 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010246
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNA-dependent RNA polymerase, mitoviral
Genome locationchr06:189414..189710
RNA-Seq ExpressionIVF0010246
SyntenyIVF0010246
Gene Ontology termsGO:0001172 - transcription, RNA-templated (biological process)
GO:0003968 - RNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK11283.1 RNA-dependent RNA polymerase, mitoviral [Cucumis melo var. makuwa]1.29e-1978.33Show/hide
Query:  KCIVSQEEVSNPKEDLQRVPPPSYTTVHIFKKEDVHLVCKPRNPRIPKSSKELKRRLEVE
        KCIV QEE  N KEDLQ VPP SYT +HIFK+EDVHL CKPRN RI K SKELKRRLEVE
Subjt:  KCIVSQEEVSNPKEDLQRVPPPSYTTVHIFKKEDVHLVCKPRNPRIPKSSKELKRRLEVE
TrEMBL top hitse value%identityAlignment
A0A5D3CHB7 RNA-dependent RNA polymerase, mitoviral6.5e-1672.31Show/hide
Query:  KCIVSQEEVSNPKEDLQRVPPPSYTTVHIFKKEDVHLVCKPRNPRIPKSSKELKRRLEVEVRRKM
        KCIV QEE  N KEDLQ VPP SYT +HIFK+EDVHL CKPRN RI K SKELKRRLEVE  + +
Subjt:  KCIVSQEEVSNPKEDLQRVPPPSYTTVHIFKKEDVHLVCKPRNPRIPKSSKELKRRLEVEVRRKM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACCTATTATCCTCTCACCACTTTCTAAATACCCCTTCATCATAACATCCTCCAACTCACGACCTAACCTTAATAAGTCATTACTTGATCAAAAGTGCATTGTTAG
CCAAGAAGAAGTCTCCAACCCTAAGGAAGATTTGCAGCGCGTTCCTCCCCCTTCGTACACTACTGTTCATATTTTCAAAAAGGAAGACGTACATCTCGTTTGTAAACCTC
GAAACCCAAGAATCCCTAAGTCATCTAAGGAACTCAAGAGGAGATTAGAGGTTGAGGTCAGAAGAAAGATGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTACCTATTATCCTCTCACCACTTTCTAAATACCCCTTCATCATAACATCCTCCAACTCACGACCTAACCTTAATAAGTCATTACTTGATCAAAAGTGCATTGTTAG
CCAAGAAGAAGTCTCCAACCCTAAGGAAGATTTGCAGCGCGTTCCTCCCCCTTCGTACACTACTGTTCATATTTTCAAAAAGGAAGACGTACATCTCGTTTGTAAACCTC
GAAACCCAAGAATCCCTAAGTCATCTAAGGAACTCAAGAGGAGATTAGAGGTTGAGGTCAGAAGAAAGATGGTTTAA
Protein sequenceShow/hide protein sequence
MLPIILSPLSKYPFIITSSNSRPNLNKSLLDQKCIVSQEEVSNPKEDLQRVPPPSYTTVHIFKKEDVHLVCKPRNPRIPKSSKELKRRLEVEVRRKMV