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IVF0010257 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010257
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr12:24196012..24198367
RNA-Seq ExpressionIVF0010257
SyntenyIVF0010257
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64205.1 hypothetical protein Csa_014029 [Cucumis sativus]2.41e-10572.44Show/hide
Query:  MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAAN-----NTSADSTPQDA
        ME QQ  TL+ NT+RKIE RGMNRLLEEEAVDEI+SFASDFPSHED+AVDLLLD IT E TSN A  IDM+LVHWA+  LRAA+       S  ST Q+A
Subjt:  MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAAN-----NTSADSTPQDA

Query:  NFESDILETRESIVDLTDSNVTDLLDDDDVDIWM-HVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHI
          ESDILETRE +VD+TDSN  DLLD DD ++WM HVRQLSL+DL  H  FPF ASKS IQALPDVF   DFSSSW C VC++DEI+A DGAKQLPC+HI
Subjt:  NFESDILETRESIVDLTDSNVTDLLDDDDVDIWM-HVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHI

Query:  FHTHCIISWLELHNSCPLCRYKLPT
        FHTHCIISWLEL NSCPLCRY+LPT
Subjt:  FHTHCIISWLELHNSCPLCRYKLPT

TYJ99062.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]3.74e-8578.06Show/hide
Query:  MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAANNTSADSTPQDANFESD
        MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLD                                       DANFESD
Subjt:  MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAANNTSADSTPQDANFESD

Query:  ILETRESIVDLTDSNVTDLLDDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFH
        ILETRESIVDLTDSNVTDLLDDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLP   I H
Subjt:  ILETRESIVDLTDSNVTDLLDDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFH

XP_008446033.1 PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1-like [Cucumis melo]4.46e-155100Show/hide
Query:  MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAANNTSADSTPQDANFESD
        MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAANNTSADSTPQDANFESD
Subjt:  MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAANNTSADSTPQDANFESD

Query:  ILETRESIVDLTDSNVTDLLDDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCI
        ILETRESIVDLTDSNVTDLLDDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCI
Subjt:  ILETRESIVDLTDSNVTDLLDDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCI

Query:  ISWLELHNSCPLCRYKLPT
        ISWLELHNSCPLCRYKLPT
Subjt:  ISWLELHNSCPLCRYKLPT

XP_010541863.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X2 [Tarenaya hassleriana]3.50e-2152.75Show/hide
Query:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWA--CAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT
        ++QL+ +D  R+ + P  ASKSAI ALP V  T+D  +S    CAVCMD E +    AKQ+PC+H++H HC++ WL+LHNSCP+CRY+LPT
Subjt:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWA--CAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT

XP_042965583.1 E3 ubiquitin-protein ligase RING1-like [Carya illinoinensis]3.65e-2151.65Show/hide
Query:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDF--SSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT
        ++QL+ +D  R+ + P  ASKSA+QALP++  ++D   S SW CAVC D   +  + AKQ+PC+HI+H+ CI+ WLELHNSCP+CR++LPT
Subjt:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDF--SSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT

TrEMBL top hitse value%identityAlignment
A0A0A0LQL0 RING-type domain-containing protein1.5e-8172.44Show/hide
Query:  MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAAN-----NTSADSTPQDA
        ME QQ  TL+ NT+RKIE RGMNRLLEEEAVDEI+SFASDFPSHED+AVDLLLD IT E TSN A  IDM+LVHWA+  LRAA+       S  ST Q+A
Subjt:  MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAAN-----NTSADSTPQDA

Query:  NFESDILETRESIVDLTDSNVTDLLDDDDVDIWM-HVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHI
          ESDILETRE +VD+TDSN  DLLD DD ++WM HVRQLSL+DL  H  FPF ASKS IQALPDVF   DFSSSW C VC++DEI+A DGAKQLPC+HI
Subjt:  NFESDILETRESIVDLTDSNVTDLLDDDDVDIWM-HVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHI

Query:  FHTHCIISWLELHNSCPLCRYKLPT
        FHTHCIISWLEL NSCPLCRY+LPT
Subjt:  FHTHCIISWLELHNSCPLCRYKLPT

A0A0D3AC63 RING-type E3 ubiquitin transferase3.4e-1754.95Show/hide
Query:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSW--ACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT
        ++QL+ +D  RH + P  ASKSAI ALP V  T D  +S    CAVCMD+  D +D  KQ+PC+H+FH  C++ WLELHNSCP+CRY+LPT
Subjt:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSW--ACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT

A0A1S3BES6 ERAD-associated E3 ubiquitin-protein ligase HRD1-like2.4e-119100Show/hide
Query:  MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAANNTSADSTPQDANFESD
        MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAANNTSADSTPQDANFESD
Subjt:  MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAANNTSADSTPQDANFESD

Query:  ILETRESIVDLTDSNVTDLLDDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCI
        ILETRESIVDLTDSNVTDLLDDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCI
Subjt:  ILETRESIVDLTDSNVTDLLDDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCI

Query:  ISWLELHNSCPLCRYKLPT
        ISWLELHNSCPLCRYKLPT
Subjt:  ISWLELHNSCPLCRYKLPT

A0A3P6FTQ1 RING-type E3 ubiquitin transferase3.4e-1754.95Show/hide
Query:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSW--ACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT
        ++QL+ +D  RH + P  ASKSAI ALP V  T D  +S    CAVCMD+  D +D  KQ+PC+H+FH  C++ WLELHNSCP+CRY+LPT
Subjt:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSW--ACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT

A0A5D3BH26 Pentatricopeptide repeat-containing protein4.1e-7178.06Show/hide
Query:  MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAANNTSADSTPQDANFESD
        MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLD                                       DANFESD
Subjt:  MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAANNTSADSTPQDANFESD

Query:  ILETRESIVDLTDSNVTDLLDDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFH
        ILETRESIVDLTDSNVTDLLDDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLP   I H
Subjt:  ILETRESIVDLTDSNVTDLLDDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFH

SwissProt top hitse value%identityAlignment
O22283 Probable E3 ubiquitin-protein ligase RHC2A5.0e-1349.32Show/hide
Query:  ASKSAIQALP--DVFPTDDFSSSWA-CAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLP
        ASKSAI+ALP  ++ PT   S S + CAVC ++ +  K  A+++PC HI+H  CI+ WL + NSCP+CR++LP
Subjt:  ASKSAIQALP--DVFPTDDFSSSWA-CAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLP

P0CH30 E3 ubiquitin-protein ligase RING17.4e-1750.55Show/hide
Query:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPT-DDFSSSW-ACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT
        ++QL+ +D  R+ + P  ASKSAI+ALP V  T  + +S +  CAVCMDD  +  + AKQ+PC+H++H  C++ WLELHNSCP+CR++LPT
Subjt:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPT-DDFSSSW-ACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT

Q6AVN2 E3 ubiquitin-protein ligase SIRP11.2e-1443.82Show/hide
Query:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT
        ++ L+  D  R+ + P  A K A++ALP V          +C+VC+DD ++    AKQ+PCEH FH+ CI+ WLELH+SCP+CR++LP+
Subjt:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT

Q8LPN7 E3 ubiquitin-protein ligase RING1-like1.0e-1852.75Show/hide
Query:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDF--SSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT
        ++QL+ +D  R+ + P  ASKSAI ALP V  T D   S    CAVCMD+  D  D  KQ+PC+H+FH  C++ WLELHNSCP+CR++LPT
Subjt:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDF--SSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT

Q94AK4 E3 ubiquitin-protein ligase RZF11.7e-1348.75Show/hide
Query:  HASFPFGASKSAIQALPDVFPTDDF--SSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT
        H   P  A KS+I ALP +  T     SS   C VC  DE + K  AKQ+PC HI+H+ CI+ WL  HNSCP+CR +LP+
Subjt:  HASFPFGASKSAIQALPDVFPTDDF--SSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT

Arabidopsis top hitse value%identityAlignment
AT3G19950.1 RING/U-box superfamily protein7.3e-2052.75Show/hide
Query:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDF--SSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT
        ++QL+ +D  R+ + P  ASKSAI ALP V  T D   S    CAVCMD+  D  D  KQ+PC+H+FH  C++ WLELHNSCP+CR++LPT
Subjt:  VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDF--SSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT

AT3G56580.1 RING/U-box superfamily protein1.2e-1448.75Show/hide
Query:  HASFPFGASKSAIQALPDVFPTDDF--SSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT
        H   P  A KS+I ALP +  T     SS   C VC  DE + K  AKQ+PC HI+H+ CI+ WL  HNSCP+CR +LP+
Subjt:  HASFPFGASKSAIQALPDVFPTDDF--SSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT

AT3G56580.2 RING/U-box superfamily protein1.2e-1448.75Show/hide
Query:  HASFPFGASKSAIQALPDVFPTDDF--SSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT
        H   P  A KS+I ALP +  T     SS   C VC  DE + K  AKQ+PC HI+H+ CI+ WL  HNSCP+CR +LP+
Subjt:  HASFPFGASKSAIQALPDVFPTDDF--SSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT

AT4G26400.1 RING/U-box superfamily protein6.4e-1634.04Show/hide
Query:  LRAANNTSADSTPQDANFESDILETRESIVDLTDSNVTDLLDDDDVDIWMH--VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMD
        +RA   +  +S+ +D   +S +++   S+    ++     + D  V   +   +  L+ +D IRH S P      A + + D  PT   S S  C++C+D
Subjt:  LRAANNTSADSTPQDANFESDILETRESIVDLTDSNVTDLLDDDDVDIWMH--VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMD

Query:  DEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLP
        D  D    AK++PC+H FH  CI+ WLELH+SCP+CRY+LP
Subjt:  DEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLP

AT4G26400.2 RING/U-box superfamily protein6.4e-1634.04Show/hide
Query:  LRAANNTSADSTPQDANFESDILETRESIVDLTDSNVTDLLDDDDVDIWMH--VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMD
        +RA   +  +S+ +D   +S +++   S+    ++     + D  V   +   +  L+ +D IRH S P      A + + D  PT   S S  C++C+D
Subjt:  LRAANNTSADSTPQDANFESDILETRESIVDLTDSNVTDLLDDDDVDIWMH--VRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMD

Query:  DEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLP
        D  D    AK++PC+H FH  CI+ WLELH+SCP+CRY+LP
Subjt:  DEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCACAACAAATAATAACGTTGAGAACCAACACAAAGAGGAAAATTGAGAGCAGAGGAATGAACAGATTATTGGAAGAAGAAGCAGTGGACGAGATTCTTTCATT
TGCCTCCGACTTCCCTTCCCACGAGGATGAAGCCGTTGATCTCCTCCTCGATGTCATCACAACCGAACTTACATCAAATCGAGCTCGAGTAATAGATATGGATTTAGTTC
ATTGGGCAGTTACCCTTTTACGTGCTGCCAATAATACTAGTGCCGATTCAACACCACAGGACGCCAATTTCGAAAGCGATATTCTTGAAACGAGGGAAAGTATAGTAGAC
CTTACCGATTCTAATGTTACGGACTTATTGGATGATGACGATGTGGATATTTGGATGCACGTGAGACAACTTTCTCTAGACGATCTGATCCGTCACGCAAGCTTCCCGTT
CGGAGCTTCAAAATCGGCGATTCAGGCACTACCAGATGTTTTTCCTACGGATGACTTTTCTTCTTCTTGGGCGTGTGCTGTGTGTATGGATGACGAGATTGATGCAAAGG
ATGGGGCGAAACAGCTACCCTGTGAACACATATTTCATACACATTGTATTATTTCTTGGTTGGAATTGCACAATTCTTGCCCACTTTGTCGATACAAATTGCCCACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCACAACAAATAATAACGTTGAGAACCAACACAAAGAGGAAAATTGAGAGCAGAGGAATGAACAGATTATTGGAAGAAGAAGCAGTGGACGAGATTCTTTCATT
TGCCTCCGACTTCCCTTCCCACGAGGATGAAGCCGTTGATCTCCTCCTCGATGTCATCACAACCGAACTTACATCAAATCGAGCTCGAGTAATAGATATGGATTTAGTTC
ATTGGGCAGTTACCCTTTTACGTGCTGCCAATAATACTAGTGCCGATTCAACACCACAGGACGCCAATTTCGAAAGCGATATTCTTGAAACGAGGGAAAGTATAGTAGAC
CTTACCGATTCTAATGTTACGGACTTATTGGATGATGACGATGTGGATATTTGGATGCACGTGAGACAACTTTCTCTAGACGATCTGATCCGTCACGCAAGCTTCCCGTT
CGGAGCTTCAAAATCGGCGATTCAGGCACTACCAGATGTTTTTCCTACGGATGACTTTTCTTCTTCTTGGGCGTGTGCTGTGTGTATGGATGACGAGATTGATGCAAAGG
ATGGGGCGAAACAGCTACCCTGTGAACACATATTTCATACACATTGTATTATTTCTTGGTTGGAATTGCACAATTCTTGCCCACTTTGTCGATACAAATTGCCCACATAG
Protein sequenceShow/hide protein sequence
MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAANNTSADSTPQDANFESDILETRESIVD
LTDSNVTDLLDDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT