; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0010287 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010287
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionYrdC domain-containing protein
Genome locationchr12:3483423..3487743
RNA-Seq ExpressionIVF0010287
SyntenyIVF0010287
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0006450 - regulation of translational fidelity (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006070 - YrdC-like domain
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64727.2 hypothetical protein Csa_013125 [Cucumis sativus]4.14e-18595.62Show/hide
Query:  MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAE
        MADSLSLIRTF TFPSS LGSSNYGIVSFLQRNRGSRVSFLKT+WSLEKCCM VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAE
Subjt:  MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAE

Query:  AVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANL
        AVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANL
Subjt:  AVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANL

Query:  SGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAASTI
        SGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTE+GTFKIIRAGSAE+QTIATL+RYSLLEAA+TI
Subjt:  SGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAASTI

TYK21224.1 yrdC domain-containing protein [Cucumis melo var. makuwa]2.55e-18486.94Show/hide
Query:  MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC---
        MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC   
Subjt:  MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC---

Query:  -------------------------------------SAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSV
                                             SAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSV
Subjt:  -------------------------------------SAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSV

Query:  LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIA
        LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIA
Subjt:  LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIA

Query:  TLQRYSLLEAASTI
        TLQRYSLLEAA+TI
Subjt:  TLQRYSLLEAASTI

XP_004148791.1 yrdC domain-containing protein, mitochondrial isoform X1 [Cucumis sativus]3.54e-19095.73Show/hide
Query:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MNTLPAKMADSLSLIRTF TFPSS LGSSNYGIVSFLQRNRGSRVSFLKT+WSLEKCCM VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAASTI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTE+GTFKIIRAGSAE+QTIATL+RYSLLEAA+TI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAASTI

XP_008465284.1 PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis melo]8.55e-19899.64Show/hide
Query:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAASTI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAA+TI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAASTI

XP_038893581.1 yrdC domain-containing protein, mitochondrial isoform X1 [Benincasa hispida]2.42e-18190.04Show/hide
Query:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MN LPAKM +SLSLIRTF TFPSSHLGS NYG+VSFLQ+NRGSRVSF KT WSLEKCCM VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACS+EAVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGE+S+L+KSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAASTI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTERGT+KI+RAGSA++QT+A L+RYSLLE A++I
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAASTI

TrEMBL top hitse value%identityAlignment
A0A0A0LUP4 YrdC-like domain-containing protein2.9e-14895.73Show/hide
Query:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MNTLPAKMADSLSLIRTF TFPSS LGSSNYGIVSFLQRNRGSRVSFLKT+WSLEKCCM VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAASTI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTE+GTFKIIRAGSAE+QTIATL+RYSLLEAA+TI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAASTI

A0A1S3CNI2 yrdC domain-containing protein, mitochondrial4.7e-15499.64Show/hide
Query:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAASTI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAA+TI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAASTI

A0A5A7T5W1 YrdC domain-containing protein4.7e-15499.64Show/hide
Query:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAASTI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAA+TI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAASTI

A0A5D3DCB7 YrdC domain-containing protein4.4e-14486.94Show/hide
Query:  MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC---
        MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC   
Subjt:  MADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC---

Query:  -------------------------------------SAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSV
                                             SAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSV
Subjt:  -------------------------------------SAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSV

Query:  LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIA
        LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIA
Subjt:  LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIA

Query:  TLQRYSLLEAASTI
        TLQRYSLLEAA+TI
Subjt:  TLQRYSLLEAASTI

A0A6J1KDV4 yrdC domain-containing protein, mitochondrial1.4e-13485.61Show/hide
Query:  LLPTTMNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDT
        +LPTTMNT PAKM + LSLIRTFATFPSS LG+ NYG VSFL  NRGSR++F KT WSLEKC M VEN LQALRPASEAFAQEAT+ALKAGKVIAVPTDT
Subjt:  LLPTTMNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSFLKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDT

Query:  LYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRR
        LYGLACDACS+EAV+RIYEIKGRKLTSPLAICVG VSDITR+A+ DHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPGL+SIGVRVPDADFIRLISRR
Subjt:  LYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRR

Query:  SETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAST
        S TALALTSANLSG+PSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLT+RG FKIIRAGSA++QT+ATL+RYSLLE A +
Subjt:  SETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLEAAST

SwissProt top hitse value%identityAlignment
Q0VC80 YrdC domain-containing protein, mitochondrial5.3e-4649.5Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS
        A   L+AG V+AVPTDTLYGLAC A  +EA+  +Y +KGR  T PLA+C+G V+D+ RY     +P GLL  LLPGPVT+V++R E   L+K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYS
        +G+R+PD  F++ +++     LALTSANLS Q SS+ V +F++LW H + + DGG +     P  R GST+VDL+  G F IIR G A + T A LQ Y 
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYS

Query:  LL
        LL
Subjt:  LL

Q3U5F4 YrdC domain-containing protein, mitochondrial9.4e-4344.25Show/hide
Query:  MPVENCLQALRPASEAFAQ---EATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGP
        +P    ++A  P    + +    A   L+AG V+AVPTDTLYGLAC A S+ A+  +Y +KGR    PLA+C+G V+D+ RY     +P  LL+ L PGP
Subjt:  MPVENCLQALRPASEAFAQ---EATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGP

Query:  VTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTER
        VT+V++R E   L+K LNP    +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST+VDL+  
Subjt:  VTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTER

Query:  GTFKIIRAGSAEKQTIATL-QRYSLL
        G F IIR G A + T + L Q+Y LL
Subjt:  GTFKIIRAGSAEKQTIATL-QRYSLL

Q499R4 YrdC domain-containing protein, mitochondrial3.2e-4344.25Show/hide
Query:  MPVENCLQALRPASEAFAQ---EATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGP
        +P    ++A  P    + +    A   L+AG V+AVPTDTLYGLAC A  + A+  +Y +KGR    PLA+C+G V+D+ RY     +P  LL+ L PGP
Subjt:  MPVENCLQALRPASEAFAQ---EATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGP

Query:  VTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTER
        VT+V++R E   L+K LNP    +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST+VDL+  
Subjt:  VTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTER

Query:  GTFKIIRAGSAEKQTIATLQ-RYSLL
        G F IIR+G A + T A LQ +Y LL
Subjt:  GTFKIIRAGSAEKQTIATLQ-RYSLL

Q60369 Putative threonylcarbamoyl-AMP synthase7.8e-2135.33Show/hide
Query:  GKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKR--GESSVLDKSLNPGLDSIGVRV
        GK++   TDTLYG++ +A + +AV ++Y IK R+   PL+ICV   ++I +YA  + L   ++D  LPGP+T++LK+  G   ++ K      D IG+R+
Subjt:  GKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKR--GESSVLDKSLNPGLDSIGVRV

Query:  PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFE-NLWQHCAYVYDGGVLPAGRAGSTIVDLTE
        PD   IR +   S   L  TSAN+SG+ S   V++ +  + +   YV D G     +  STI+ + +
Subjt:  PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFE-NLWQHCAYVYDGGVLPAGRAGSTIVDLTE

Q86U90 YrdC domain-containing protein, mitochondrial2.2e-4445.58Show/hide
Query:  MPVENCLQALRPASEAFAQ---EATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGP
        +P    +QA  P    + +    A   L+AG V+AVPTDTLYGLAC A  + A+  +Y +KGR    PLA+C+G V+D+ RY     +P GLL  LLPGP
Subjt:  MPVENCLQALRPASEAFAQ---EATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGP

Query:  VTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTER
        VT+V++R E   L+K LNP    +G+R+PD  F++ +++  E  LALTSANLS Q SS+ V +F++LW   + V DGG +     P  R GST+VDL+  
Subjt:  VTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTER

Query:  GTFKIIRAGSAEKQTIATL-QRYSLL
        G F IIR G A + T A L Q+Y LL
Subjt:  GTFKIIRAGSAEKQTIATL-QRYSLL

Arabidopsis top hitse value%identityAlignment
AT3G01920.1 DHBP synthase RibB-like alpha/beta domain3.7e-1030Show/hide
Query:  QEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSG----------LLDSLLPGPVTVVLKR----
        Q   D LK G V  +PTDT+Y +ACD  +  AV R+  IK  + + PL+I    + DI  +  T   P G           +   LPGP T +L      
Subjt:  QEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSG----------LLDSLLPGPVTVVLKR----

Query:  -------GESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLW-----QHCAYVYDGGVLPAGRAGSTIVDLTER
               G +SV   S      ++GVR+ D    + I ++ +  L  TS  + G   +  + D   +      +   +V DGG+  A    STIVD+T  
Subjt:  -------GESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLW-----QHCAYVYDGGVLPAGRAGSTIVDLTER

Query:  GTF-KIIRAG
        G + K+IR G
Subjt:  GTF-KIIRAG

AT5G60590.1 DHBP synthase RibB-like alpha/beta domain1.3e-3956.79Show/hide
Query:  LPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSF-LKTDWSLEKC--CMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        L  ++A+ L  I    + P    G S     S   ++R  R     K  WSLE+   C+  ++CL  + PA+EA+AQEA +A+K+ KVIAVPTDTLYG A
Subjt:  LPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSF-LKTDWSLEKC--CMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKR
        CDACS EAV RIYEIKGRKLTSPLAICVG V DI R A T HLP GLLDSLLPGPVT+VL+R
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKR

AT5G60590.2 DHBP synthase RibB-like alpha/beta domain1.4e-8963.04Show/hide
Query:  LPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSF-LKTDWSLEKC--CMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        L  ++A+ L  I    + P    G S     S   ++R  R     K  WSLE+   C+  ++CL  + PA+EA+AQEA +A+K+ KVIAVPTDTLYG A
Subjt:  LPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSF-LKTDWSLEKC--CMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACS EAV RIYEIKGRKLTSPLAICVG V DI R A T HLP GLLDSLLPGPVT+VL+RGESS+L+KSLNPG+ +IGVRVPD +FIR +SR S + L
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLE
        ALTSANLSG  SSVCV DFENLWQHCAYVYDGG+LP+GRAGSTIVDLT+ G +KIIR GSA++ T+A L++Y L E
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIATLQRYSLLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATACCCGTACTCAGCCGTCCTTCTTCTCCATCTCTCTTCTTCTAAGGCAAACTCGGCGCCGGCCGTATCTCACATTTGCCCACTGCAATTTTTTTGATTTCGAATC
CTTCACAATCCCAAACCTAAGTTTCCAAACACCTCCTACTCTCTCTTCGAAACCCCGCTTTGGATTGCTACCGACCACCATGAACACACTTCCGGCGAAAATGGCTGACA
GTCTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCACCTGGGTTCTTCCAATTATGGGATAGTTTCGTTCTTGCAACGAAATAGAGGATCAAGGGTTAGTTTT
CTTAAAACGGATTGGAGTTTAGAGAAGTGTTGTATGCCTGTGGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCCCTTAA
AGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTCTATGGACTCGCTTGTGATGCTTGTTCTGCCGAAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTA
CAAGCCCTCTCGCCATTTGTGTTGGTGGTGTCTCTGATATAACTCGCTATGCTATAACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGCCTGTGACT
GTTGTTCTGAAAAGAGGTGAATCAAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTCCGTGTACCTGATGCTGACTTTATTCGGCTGATTTCTCG
TAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAATCTATGGCAACACTGTGCTTATGTATACG
ATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCGACGATCGTTGACCTCACTGAGCGAGGCACATTTAAGATTATAAGAGCTGGAAGCGCAGAGAAGCAGACTATTGCA
ACACTTCAAAGGTATTCACTATTAGAAGCAGCATCTACTATTTGA
mRNA sequenceShow/hide mRNA sequence
CAAACCGGTCGGACCCCACTTATGTATACCCGTACTCAGCCGTCCTTCTTCTCCATCTCTCTTCTTCTAAGGCAAACTCGGCGCCGGCCGTATCTCACATTTGCCCACTG
CAATTTTTTTGATTTCGAATCCTTCACAATCCCAAACCTAAGTTTCCAAACACCTCCTACTCTCTCTTCGAAACCCCGCTTTGGATTGCTACCGACCACCATGAACACAC
TTCCGGCGAAAATGGCTGACAGTCTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCACCTGGGTTCTTCCAATTATGGGATAGTTTCGTTCTTGCAACGAAAT
AGAGGATCAAGGGTTAGTTTTCTTAAAACGGATTGGAGTTTAGAGAAGTGTTGTATGCCTGTGGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCA
AGAGGCTACAGATGCCCTTAAAGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTCTATGGACTCGCTTGTGATGCTTGTTCTGCCGAAGCAGTCCATAGGATTTATG
AAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGGTGTCTCTGATATAACTCGCTATGCTATAACAGACCATTTGCCTTCTGGTTTGCTTGATTCT
CTCCTTCCTGGGCCTGTGACTGTTGTTCTGAAAAGAGGTGAATCAAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTCCGTGTACCTGATGCTGA
CTTTATTCGGCTGATTTCTCGTAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAATCTATGGC
AACACTGTGCTTATGTATACGATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCGACGATCGTTGACCTCACTGAGCGAGGCACATTTAAGATTATAAGAGCTGGAAGC
GCAGAGAAGCAGACTATTGCAACACTTCAAAGGTATTCACTATTAGAAGCAGCATCTACTATTTGAACATCTGAATCTAGTCATGTTCCTAAGCATCTGTTCATTACCAT
AGAGGTTCTAAAGATTCTTTTGGTAGGGTGAGTTAGAAGGGCTCGTTTCAATTGATTAGAAGAAAAAAATGTTTTCAAAAAAGGTTCTTTTTTTTTTAACTATTTTGATG
AAAATGAGTTTAAAATAGATTTTAAAAGTGTTTCATTAGTTATTTTTAGTGGTTGTCAAACACGTCAACTTTTTTTTTTTTTCCCTAAAATGACTTATTTTCAAAATACC
AAAACTCAATACCAAAACTCAAACTAGATAATGTCTAGATTAAGCTTATGGCTTTACCATTTCCTTTTAACCACTATATTTCCCTTTTTTACTGAAGTTCTTGATTTTGT
ACGATTATGTAACATTTGGAAATGTATTATGATGAGGAATTCACTAATACTTGGAATGAGAAGAACCTTC
Protein sequenceShow/hide protein sequence
MYTRTQPSFFSISLLLRQTRRRPYLTFAHCNFFDFESFTIPNLSFQTPPTLSSKPRFGLLPTTMNTLPAKMADSLSLIRTFATFPSSHLGSSNYGIVSFLQRNRGSRVSF
LKTDWSLEKCCMPVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGGVSDITRYAITDHLPSGLLDSLLPGPVT
VVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAEKQTIA
TLQRYSLLEAASTI