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IVF0010354 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010354
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLIM and calponin domains-containing protein 1, putative
Genome locationchr06:22108853..22109716
RNA-Seq ExpressionIVF0010354
SyntenyIVF0010354
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY65911.1 hypothetical protein CUMW_244680 [Citrus unshiu]4.45e-5254.69Show/hide
Query:  FKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS
        FKKS+IL+L  L  LL+ITPLLSSSLRPTYLYF+FN+LIIALG +AGLL+     PP DH++     +        +S   S +KK +A+EK+ S+KI S
Subjt:  FKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGI------EDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        G VK+  LKKCPS  S+F+IG G++E  +   +      E+ EEE VGG    +GQELF +AE FIGNFYKQLKMQ+E+SWK I GFYQK F
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGI------EDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

KAA0055857.1 putative LIM and calponin domains-containing protein 1 [Cucumis melo var. makuwa]4.37e-123100Show/hide
Query:  MMNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS
        MMNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS
Subjt:  MMNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGIEDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        GNVKMESLKKCPSASSIFYIGEGDSEAEETTGIEDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGIEDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

KAG6577458.1 hypothetical protein SDJN03_25032, partial [Cucurbita argyrosperma subsp. sororia]6.46e-5757.84Show/hide
Query:  MNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISSG
        M++ K+SE++++L LT+LL+ITPLLSSSLRPTYLYF+FNLLI+      GLL+   P++    N  +  SP T A++        HRALEKAHSD I   
Subjt:  MNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISSG

Query:  NVKMESLKKCPSASSIFYIGEGDSEAEETTGIEDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        N K+ESL KCPSAS+IF+IG+GDSE        + EEE  GG    NGQ+LFAQAETFIGNFYKQL+MQK+ESWKN+HGFY+K F
Subjt:  NVKMESLKKCPSASSIFYIGEGDSEAEETTGIEDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

KAG7015529.1 hypothetical protein SDJN02_23165, partial [Cucurbita argyrosperma subsp. argyrosperma]1.91e-5256.74Show/hide
Query:  MNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISSG
        M++ K+SE++++L LT+LL+ITPLLSSSLRPTYLYF+FNLLI+      GLL+   P++    N  +  SP T A++        HRALEKAHSD I   
Subjt:  MNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISSG

Query:  NVKMESLKKCPSASSIFYIGEGDSEAEETTGIEDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIH
        N K+ESL KCPS S+IF+IG+GDSE        + EEE  GG    NGQ+LFAQAETFIGNFYKQL+MQK+ESWKN+H
Subjt:  NVKMESLKKCPSASSIFYIGEGDSEAEETTGIEDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIH

KGN56109.1 hypothetical protein Csa_011766 [Cucumis sativus]1.39e-11596.81Show/hide
Query:  MMNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS
        MMNKFKKSEI+VLL LTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETS LKKHRALEKAHSDKISS
Subjt:  MMNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTG-IEDMEEEVV-GGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        GNVKMESLKKCPSASSIFYIGEGDSEAEETTG IED EEEVV GGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTG-IEDMEEEVV-GGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

TrEMBL top hitse value%identityAlignment
A0A067F414 Uncharacterized protein5.5e-4054.69Show/hide
Query:  FKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS
        FKKS+IL+L  L  LL+ITPLLSSSLRPTYLYF+FN+LIIALG +AGLL+     PP DH++     +        +S   S +KK +A+EK+ S+KI S
Subjt:  FKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGI------EDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        G VK+  LKKCPS  S+F+IG G++E  +   +      E+ EEE VGG    +GQELF +AE FIGNFYKQLKMQ+E+SWK I GFYQK F
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGI------EDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

A0A0A0L509 Uncharacterized protein1.4e-8896.81Show/hide
Query:  MMNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS
        MMNKFKKSEI+VLL LTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETS LKKHRALEKAHSDKISS
Subjt:  MMNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTG-IEDMEEE-VVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        GNVKMESLKKCPSASSIFYIGEGDSEAEETTG IED EEE VVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTG-IEDMEEE-VVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

A0A2H5QMS9 Uncharacterized protein4.2e-4054.69Show/hide
Query:  FKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS
        FKKS+IL+L  L  LL+ITPLLSSSLRPTYLYF+FN+LIIALG +AGLL+     PP DH++     +        +S   S +KK +A+EK+ S+KI S
Subjt:  FKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGI------EDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        G VK+  LKKCPS  S+F+IG G++E  +   +      E+ EEE VGG    +GQELF +AE FIGNFYKQLKMQ+E+SWK I GFYQK F
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGI------EDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

A0A5D3DK86 Putative LIM and calponin domains-containing protein 13.0e-94100Show/hide
Query:  MMNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS
        MMNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS
Subjt:  MMNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGIEDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        GNVKMESLKKCPSASSIFYIGEGDSEAEETTGIEDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGIEDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

V4UT10 Uncharacterized protein5.5e-4054.69Show/hide
Query:  FKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS
        FKKS+IL+L  L  LL+ITPLLSSSLRPTYLYF+FN+LIIALG +AGLL+     PP DH++     +        +S   S +KK +A+EK+ S+KI S
Subjt:  FKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLND----PPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISS

Query:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGI------EDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF
        G VK+  LKKCPS  S+F+IG G++E  +   +      E+ EEE VGG    +GQELF +AE FIGNFYKQLKMQ+E+SWK I GFYQK F
Subjt:  GNVKMESLKKCPSASSIFYIGEGDSEAEETTGI------EDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAACAAGTTCAAGAAATCAGAAATTCTAGTGCTTTTAGGCCTCACAATTCTTCTAGTAATAACTCCTCTTCTTTCCTCATCCCTAAGACCAACATATCTCTACTT
CATCTTCAACCTCCTCATCATTGCCCTTGGAGTACAAGCTGGCCTTCTTAATGACCCTCCTCCTGATCATCAAGACAAGACCAACAAGCTTTCTCTAACTTCACCTGAAA
CCGTTGCTTCCTCCACGGAAACCTCGCCCCTCAAGAAGCATCGGGCTTTGGAGAAGGCTCACTCCGACAAGATTTCATCTGGCAATGTCAAAATGGAATCTCTTAAGAAG
TGTCCCTCCGCTTCGAGTATTTTCTACATCGGAGAGGGCGATAGCGAGGCCGAGGAGACGACAGGGATCGAGGACATGGAAGAGGAGGTTGTCGGGGGCGGCGGAAATAA
TAATGGTCAAGAATTGTTTGCTCAAGCTGAGACGTTTATTGGGAACTTTTACAAGCAGTTGAAGATGCAGAAAGAAGAGTCTTGGAAAAACATTCATGGTTTCTATCAAA
AACGCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATAAATATGGCCAAGAAACTTTTCCTCTATTTTCCACTACAAGAACAACTCCTATACACTTTTGGGAGAATATTTAGTAGCTAGCTAGATCAAAGGTTGAGAGAAATGAT
GAACAAGTTCAAGAAATCAGAAATTCTAGTGCTTTTAGGCCTCACAATTCTTCTAGTAATAACTCCTCTTCTTTCCTCATCCCTAAGACCAACATATCTCTACTTCATCT
TCAACCTCCTCATCATTGCCCTTGGAGTACAAGCTGGCCTTCTTAATGACCCTCCTCCTGATCATCAAGACAAGACCAACAAGCTTTCTCTAACTTCACCTGAAACCGTT
GCTTCCTCCACGGAAACCTCGCCCCTCAAGAAGCATCGGGCTTTGGAGAAGGCTCACTCCGACAAGATTTCATCTGGCAATGTCAAAATGGAATCTCTTAAGAAGTGTCC
CTCCGCTTCGAGTATTTTCTACATCGGAGAGGGCGATAGCGAGGCCGAGGAGACGACAGGGATCGAGGACATGGAAGAGGAGGTTGTCGGGGGCGGCGGAAATAATAATG
GTCAAGAATTGTTTGCTCAAGCTGAGACGTTTATTGGGAACTTTTACAAGCAGTTGAAGATGCAGAAAGAAGAGTCTTGGAAAAACATTCATGGTTTCTATCAAAAACGC
TTTTGAGGGGTGTTTTAATTTTTTTCTTTCCTCCATGAAGTTATTTGGGATGAATGAAAATTATGGAAAATTAATATATGAAACAAAGACACAAAAGAGAAAGCTGTTGT
TGGTTTGTACAGTTTAATCCCAGTTTTATTGTATTGTGTTTCTAATTTTACTTTTCTTTCTTAAATTAACTATAGAAACTCTATGTAACAAAAG
Protein sequenceShow/hide protein sequence
MMNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLLNDPPPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISSGNVKMESLKK
CPSASSIFYIGEGDSEAEETTGIEDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRF