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IVF0010415 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010415
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionIntegrase, catalytic core
Genome locationtig00002870:62473..62778
RNA-Seq ExpressionIVF0010415
SyntenyIVF0010415
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033603.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.01e-4896.55Show/hide
Query:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETA
        M VPR NSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINK QKNETA
Subjt:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETA

KAA0037350.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.86e-3781.61Show/hide
Query:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETA
        M VP  NSNQVELDNVFYV  MKKNLVSVSQLTSA NF+VFG ++VKVYHNLKVSG+PLMEGRRMDSIYVMSA+T Y+NK +KNETA
Subjt:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETA

KAA0037684.1 Integrase, catalytic core [Cucumis melo var. makuwa]4.09e-3879.07Show/hide
Query:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNET
        M VPR N NQVELDNVFYV  MKKNLV++SQLTS  NF+VFG N+VKVYHN KVSGTPL+EGRRMD IYVMSAET Y+NKT+KNET
Subjt:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNET

KAA0046986.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.79e-3985.06Show/hide
Query:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETA
        M VPR NSNQVELDNVFYV  MKKNLVSVSQLTSA NF+VFG ++VKVYHNLKVSGTPLMEGRRMDSIYVMSAET Y+NKT+KN+TA
Subjt:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETA

TYK22269.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.27e-50100Show/hide
Query:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETAY
        MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETAY
Subjt:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETAY

TrEMBL top hitse value%identityAlignment
A0A5A7ST06 Integrase, catalytic core4.0e-3796.55Show/hide
Query:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETA
        M VPR NSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINK QKNETA
Subjt:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETA

A0A5A7T1U9 Integrase, catalytic core1.3e-3081.61Show/hide
Query:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETA
        M VP  NSNQVELDNVFYV  MKKNLVSVSQLTSA NF+VFG ++VKVYHNLKVSG+PLMEGRRMDSIYVMSA+T Y+NK +KNETA
Subjt:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETA

A0A5A7T2J1 Integrase, catalytic core1.4e-2979.07Show/hide
Query:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNET
        M VPR N NQVELDNVFYV  MKKNLV++SQLTS  NF+VFG N+VKVYHN KVSGTPL+EGRRMD IYVMSAET Y+NKT+KNET
Subjt:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNET

A0A5A7TYD2 Integrase, catalytic core1.7e-3285.06Show/hide
Query:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETA
        M VPR NSNQVELDNVFYV  MKKNLVSVSQLTSA NF+VFG ++VKVYHNLKVSGTPLMEGRRMDSIYVMSAET Y+NKT+KN+TA
Subjt:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETA

A0A5D3DG87 Integrase, catalytic core3.0e-40100Show/hide
Query:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETAY
        MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETAY
Subjt:  MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETAY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTGCCTCGTTTTAATTCCAATCAAGTGGAATTAGATAATGTATTTTATGTGCTTGAAATGAAGAAGAATTTGGTGTCAGTATCTCAATTAACTTCAGCTAGCAA
CTTCATCGTGTTTGGATCTAACAATGTTAAGGTGTATCATAATCTTAAAGTAAGTGGTACACCGCTGATGGAAGGACGAAGGATGGACTCCATCTACGTTATGTCAGCGG
AGACTACCTACATAAACAAGACGCAGAAGAATGAAACAGCATATTGTGGCATGCAAGACTTGGTCATGTTAGCTACAGCAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGTGCCTCGTTTTAATTCCAATCAAGTGGAATTAGATAATGTATTTTATGTGCTTGAAATGAAGAAGAATTTGGTGTCAGTATCTCAATTAACTTCAGCTAGCAA
CTTCATCGTGTTTGGATCTAACAATGTTAAGGTGTATCATAATCTTAAAGTAAGTGGTACACCGCTGATGGAAGGACGAAGGATGGACTCCATCTACGTTATGTCAGCGG
AGACTACCTACATAAACAAGACGCAGAAGAATGAAACAGCATATTGTGGCATGCAAGACTTGGTCATGTTAGCTACAGCAAATTAA
Protein sequenceShow/hide protein sequence
MTVPRFNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKTQKNETAYCGMQDLVMLATAN