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IVF0010434 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010434
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein, putative, unclassified
Genome locationchr11:23588325..23588603
RNA-Seq ExpressionIVF0010434
SyntenyIVF0010434
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033517.1 putative retroelement [Cucumis melo var. makuwa]2.31e-52100Show/hide
Query:  MIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT
        MIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT
Subjt:  MIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT

KAA0035950.1 retrotransposon protein, putative, unclassified [Cucumis melo var. makuwa]3.40e-3372.73Show/hide
Query:  MIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT
        M+V  CK DDQKALQ+VYYILKL SNIISL ++TED NK+QM GD +KV +RS KLLMS K+TQN LYKI LK FKQVC LTSL+DPT
Subjt:  MIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT

XP_031741708.1 uncharacterized protein LOC116403903 [Cucumis sativus]1.91e-3880.43Show/hide
Query:  MEKGMIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT
        MEKGM++ ECK  DQKALQEVYYI KL SNIISLGQMTE+ NKVQM  D MKVSDRS KLLMS K+TQN LYKITLK  KQVCLLTSLEDPT
Subjt:  MEKGMIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT

XP_031741713.1 uncharacterized protein LOC116403908 [Cucumis sativus]2.05e-3579.35Show/hide
Query:  MEKGMIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT
        MEKG ++ ECK  DQKALQEVYYI KL SNIISLGQMTE+ NKVQM  D MKVSDRS KLLMS K TQN LYKITLK  KQVCLLTSLEDPT
Subjt:  MEKGMIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT

XP_042450925.1 uncharacterized protein LOC122035851 [Zingiber officinale]4.22e-3170.65Show/hide
Query:  MEKGMIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT
        M KG +V ECK  DQKA+ EVYYI KL SNIISLGQ+TE  N+V M GD MKV DRS KLL+  K+TQN LYKITLK FKQVCL+ SLEDPT
Subjt:  MEKGMIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT

TrEMBL top hitse value%identityAlignment
A0A251VAV7 Putative zinc finger, CCHC-type1.5e-1452.27Show/hide
Query:  KGMIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLED
        KG ++ +CK  DQ  L+EVY+I  L SNIISLGQMTE+  ++ M GD +K+SD   KL+M  +++ N LYKI L   K VCLLT+L+D
Subjt:  KGMIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLED

A0A5A7SWA2 Putative retroelement1.5e-38100Show/hide
Query:  MIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT
        MIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT
Subjt:  MIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT

A0A5A7SY21 Retrotransposon protein, putative, unclassified5.5e-2572.73Show/hide
Query:  MIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT
        M+V  CK DDQKALQ+VYYILKL SNIISL ++TED NK+QM GD +KV +RS KLLMS K+TQN LYKI LK FKQVC LTSL+DPT
Subjt:  MIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT

A0A6L2JF84 Zinc finger, CCHC-type2.2e-1347.25Show/hide
Query:  MEKGMIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDP
        M KG ++ +CK  DQ+ L EVY+I  L SNIISLG+MTE  ++V++ G  ++V DRS+ LLM  K++ N LYK+ LK     CLL + ++P
Subjt:  MEKGMIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDP

L0P2J7 PH01B015M02.3 protein1.8e-1244.94Show/hide
Query:  KGMIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDP
        KG ++L CK  DQK L ++Y+I  L +NI+SLGQ+ E   +V++ G+ ++V D+++ LLM+ K++ N LYKI+L+  K VC+  SLE P
Subjt:  KGMIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAAGGAATGATTGTGTTAGAGTGCAAAACTGATGATCAGAAGGCTCTCCAAGAGGTGTATTACATTCTAAAGCTACTTAGCAACATCATAAGCCTTGGGCAAAT
GACAGAAGACGAAAACAAGGTACAAATGGCGGGAGATGCCATGAAAGTGTCTGACAGGAGTAGGAAGCTTTTGATGTCGAGGAAGCAAACACAAAATAGTTTGTACAAGA
TAACCTTGAAGATGTTCAAGCAAGTTTGCCTTCTGACAAGCCTAGAAGATCCAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAAGGAATGATTGTGTTAGAGTGCAAAACTGATGATCAGAAGGCTCTCCAAGAGGTGTATTACATTCTAAAGCTACTTAGCAACATCATAAGCCTTGGGCAAAT
GACAGAAGACGAAAACAAGGTACAAATGGCGGGAGATGCCATGAAAGTGTCTGACAGGAGTAGGAAGCTTTTGATGTCGAGGAAGCAAACACAAAATAGTTTGTACAAGA
TAACCTTGAAGATGTTCAAGCAAGTTTGCCTTCTGACAAGCCTAGAAGATCCAACATAG
Protein sequenceShow/hide protein sequence
MEKGMIVLECKTDDQKALQEVYYILKLLSNIISLGQMTEDENKVQMAGDAMKVSDRSRKLLMSRKQTQNSLYKITLKMFKQVCLLTSLEDPT