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IVF0010442 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010442
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr12:19647739..19656808
RNA-Seq ExpressionIVF0010442
SyntenyIVF0010442
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034095.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.02e-7979.64Show/hide
Query:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE
        MTS+ NTSKALSDI KRPNTR+RSRE QS E+MPPFEVAKNIW+Q SKPPKG I+IKEN  ID++NS  E  +EE+P PNI  VMVTDVDTSEDRM ELE
Subjt:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE

Query:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL
        KK+NMLMKAV+ER++EIA LKNHIESRDAAESSHTHT KNA+KGKA+MQESQPQNSTSIASLS+QQL
Subjt:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL

KAA0037432.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.02e-7879.64Show/hide
Query:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE
        MTS+ NTSKALSDI KRPNTR+RSRE QS E+MPPFEVAKNIW+Q SKPPKG I+IKEN  ID+H SS +  SEE+PHPNI  VMVT+VDTSE+RM ELE
Subjt:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE

Query:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL
        KK+NMLMK V+ER+YEIA LKNHIESRDAAESSH HT KN DKGKAVMQESQPQNSTSIASLS+QQL
Subjt:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL

KAA0050518.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.40e-8079.04Show/hide
Query:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE
        MTS+ NTSKALSDI KRPNTR+RSRE QS E+MPPFEV KNIW+Q SKPPKG I+IKEN  ID+HNS  E  +EE+P PNI  VMVTDVDTSEDRM ELE
Subjt:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE

Query:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL
        KK+NMLMKAV+E+++EIA LKNHIESRDAAESSHTHT KNA+KGKA+MQESQPQNSTSIASLS+QQL
Subjt:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL

KAA0054002.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.40e-106100Show/hide
Query:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE
        MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE
Subjt:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE

Query:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL
        KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL
Subjt:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL

KAA0063235.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.18e-7979.27Show/hide
Query:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE
        MTS+SNTSKALSDISKRP T +RSRETQSY++MPPFEVA NIW+QFSK PKG I+IKEN VI+KHNSSFE  +EE PHPNI  VM TD+DTS DRMTELE
Subjt:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE

Query:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSI
        KKINMLMKAV+ER+YEIA LKNH+ES DA ESSHT+T  NADKGKA+MQE+QPQNSTSIA LSI
Subjt:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSI

TrEMBL top hitse value%identityAlignment
A0A5A7SY17 Ty3-gypsy retrotransposon protein6.0e-6379.64Show/hide
Query:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE
        MTS+ NTSKALSDI KRPNTR+RSRE QS E+MPPFEVAKNIW+Q SKPPKG I+IKEN  ID++NS  E  +EE+P PNI  VMVTDVDTSEDRM ELE
Subjt:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE

Query:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL
        KK+NMLMKAV+ER++EIA LKNHIESRDAAESSHTHT KNA+KGKA+MQESQPQNSTSIASLS+QQL
Subjt:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL

A0A5A7TZU9 Ribonuclease H2.7e-6379.04Show/hide
Query:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE
        MTS+ NTSKALSDI KRPNTR+RSRE QS E+MPPF+VAKNIW+Q SKPPKG I+IKEN  +D+HNS  E  +EE+P PNI  VMVTDVDTSEDRM ELE
Subjt:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE

Query:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL
        KK+NMLMKAV+ER++EIA LKNHIESRDAAESSHTHT KNA+KGKA+MQESQPQNSTSIASLS+QQL
Subjt:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL

A0A5A7U5H1 Ty3-gypsy retrotransposon protein3.5e-6379.04Show/hide
Query:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE
        MTS+ NTSKALSDI KRPNTR+RSRE QS E+MPPFEV KNIW+Q SKPPKG I+IKEN  ID+HNS  E  +EE+P PNI  VMVTDVDTSEDRM ELE
Subjt:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE

Query:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL
        KK+NMLMKAV+E+++EIA LKNHIESRDAAESSHTHT KNA+KGKA+MQESQPQNSTSIASLS+QQL
Subjt:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL

A0A5A7UJR2 Reverse transcriptase6.0e-6378.44Show/hide
Query:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE
        MTS+ NTSKALSDI KRPNTR+RSRE QS E+MPPFEVAKNIW+Q SKPPKG I+IKEN  ID+HNS  E L+EE+P PNI  VMVTDVDTSEDRM +LE
Subjt:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE

Query:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL
        KK+NM MK V+ER++EIA LKNHIESRDAAESSHTHT KNA+KGKA+MQESQPQNSTSIASLS+Q+L
Subjt:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL

A0A5D3DAS0 Ty3-gypsy retrotransposon protein2.0e-82100Show/hide
Query:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE
        MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE
Subjt:  MTSESNTSKALSDISKRPNTRNRSRETQSYENMPPFEVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELE

Query:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL
        KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL
Subjt:  KKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKAVMQESQPQNSTSIASLSIQQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACAAAAGCTTGTTTTATAATTTTGTCGGATTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGGAGAAGAAGAA
GAAGAAGAAGAATGAGGAGGATAAAAGAATAATTCGGCATTTGATAGAGGATGATAAAGATGGTGACAATGATGAGGATGATATCCCTCACAGGAAAACATCTAAAGAAA
TCATGACATCTGAAAGCAACACTTCCAAAGCTCTGAGCGACATCAGCAAGCGGCCAAATACTCGCAACCGCTCAAGGGAGACTCAATCATATGAGAATATGCCACCTTTT
GAGGTTGCAAAAAATATTTGGAAACAGTTTTCAAAGCCACCAAAAGGTGAAATTTTAATCAAAGAAAATTCTGTGATTGACAAACACAACTCGTCCTTTGAACACTTAAG
TGAGGAGATACCTCACCCAAATATAACGTTCGTTATGGTGACTGACGTGGATACAAGTGAAGATAGAATGACAGAGCTTGAAAAGAAGATCAACATGCTCATGAAGGCCG
TTCAAGAAAGGAACTATGAGATTGCATCTCTCAAGAATCACATCGAGAGTCGTGATGCTGCTGAATCAAGTCACACACATACTGCCAAGAATGCTGACAAAGGAAAGGCA
GTTATGCAAGAAAGTCAACCACAAAATTCGACTTCAATTGCATCGTTGTCTATTCAGCAGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGACAAAAGCTTGTTTTATAATTTTGTCGGATTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGGAGAAGAAGAA
GAAGAAGAAGAATGAGGAGGATAAAAGAATAATTCGGCATTTGATAGAGGATGATAAAGATGGTGACAATGATGAGGATGATATCCCTCACAGGAAAACATCTAAAGAAA
TCATGACATCTGAAAGCAACACTTCCAAAGCTCTGAGCGACATCAGCAAGCGGCCAAATACTCGCAACCGCTCAAGGGAGACTCAATCATATGAGAATATGCCACCTTTT
GAGGTTGCAAAAAATATTTGGAAACAGTTTTCAAAGCCACCAAAAGGTGAAATTTTAATCAAAGAAAATTCTGTGATTGACAAACACAACTCGTCCTTTGAACACTTAAG
TGAGGAGATACCTCACCCAAATATAACGTTCGTTATGGTGACTGACGTGGATACAAGTGAAGATAGAATGACAGAGCTTGAAAAGAAGATCAACATGCTCATGAAGGCCG
TTCAAGAAAGGAACTATGAGATTGCATCTCTCAAGAATCACATCGAGAGTCGTGATGCTGCTGAATCAAGTCACACACATACTGCCAAGAATGCTGACAAAGGAAAGGCA
GTTATGCAAGAAAGTCAACCACAAAATTCGACTTCAATTGCATCGTTGTCTATTCAGCAGTTGTAG
Protein sequenceShow/hide protein sequence
METKACFIILSDLKKKKKKKKKVKKKKKEKKKKEKKKKKKNEEDKRIIRHLIEDDKDGDNDEDDIPHRKTSKEIMTSESNTSKALSDISKRPNTRNRSRETQSYENMPPF
EVAKNIWKQFSKPPKGEILIKENSVIDKHNSSFEHLSEEIPHPNITFVMVTDVDTSEDRMTELEKKINMLMKAVQERNYEIASLKNHIESRDAAESSHTHTAKNADKGKA
VMQESQPQNSTSIASLSIQQL