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IVF0010446 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010446
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr06:14267648..14267815
RNA-Seq ExpressionIVF0010446
SyntenyIVF0010446
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038851.1 retrotransposon protein [Cucumis melo var. makuwa]1.07e-3096.36Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRD+LA SMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
KAA0041029.1 retrotransposon protein [Cucumis melo var. makuwa]1.86e-2996.36Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQW D+LAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
KAA0043059.1 retrotransposon protein [Cucumis melo var. makuwa]1.30e-3198.18Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
        MTYCDDV+DEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
KAA0051443.1 retrotransposon protein [Cucumis melo var. makuwa]6.08e-29100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
KAA0065284.1 retrotransposon protein [Cucumis melo var. makuwa]7.52e-3098.18Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQF NA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
TrEMBL top hitse value%identityAlignment
A0A5A7STY2 Retrotransposon protein3.1e-23100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
A0A5A7TTQ6 Retrotransposon protein3.1e-23100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
A0A5A7UMZ4 Retrotransposon protein3.1e-23100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
A0A5D3BM56 Retrotransposon protein3.1e-23100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
A0A5D3D7X8 Retrotransposon protein3.1e-23100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCAACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACAACCTAGCCGCATCGATGTTCACCGATTGGCAGTTCCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCAACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACAACCTAGCCGCATCGATGTTCACCGATTGGCAGTTCCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA