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IVF0010453 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010453
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr02:8507297..8507461
RNA-Seq ExpressionIVF0010453
SyntenyIVF0010453
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045021.1 hypothetical protein E6C27_scaffold30G00060 [Cucumis melo var. makuwa]4.05e-1463.46Show/hide
Query:  FYYGLNDNTQQTTDAVFVGG-ILRSFYSQIKTTMDFMANNSQEWNDDGFGSK
        FY+GL+++TQQT  A+FVGG +LRS Y++I+ T+D M NNSQEW DDGFGS+
Subjt:  FYYGLNDNTQQTTDAVFVGG-ILRSFYSQIKTTMDFMANNSQEWNDDGFGSK

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]2.06e-1257.41Show/hide
Query:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGSK
        M+ FY+GL+ NT Q+ + VF GG+LRS Y+QIK  +D MA+NSQEW D+ FGS+
Subjt:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGSK

KAA0060174.1 hypothetical protein E6C27_scaffold542G00490 [Cucumis melo var. makuwa]3.40e-3098.15Show/hide
Query:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGSK
        MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGS+
Subjt:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGSK

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]2.44e-1561.11Show/hide
Query:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGSK
        M+VFY+GL+ +T Q  + +FVGG+LRS Y+QIK T+D M+NNSQEW+D GFGS+
Subjt:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGSK

KGN53801.1 hypothetical protein Csa_014772 [Cucumis sativus]4.78e-1256.6Show/hide
Query:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGS
        ++ FY+GL+ +TQQ  DAVF+GG+LR   + IKTT+D M +NSQEW D+ FGS
Subjt:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGS

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein5.9e-1161.11Show/hide
Query:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGSK
        M+VFY+GL+ +T Q  + +FVGG+LRS Y+QIK T+D M+NNSQEW+D GFGS+
Subjt:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGSK

A0A5A7UYP0 Retrotrans_gag domain-containing protein2.0e-2298.15Show/hide
Query:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGSK
        MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGS+
Subjt:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGSK

A0A5D3CC26 Uncharacterized protein1.9e-0957.41Show/hide
Query:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGSK
        M+ FY+GL+ NT Q+ + VF GG+LRS Y+QIK  +D MA+NSQEW D+ FGS+
Subjt:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGSK

A0A5D3CV99 Uncharacterized protein6.5e-1063.46Show/hide
Query:  FYYGLNDNTQQTTDAVFVGG-ILRSFYSQIKTTMDFMANNSQEWNDDGFGSK
        FY+GL+++TQQT  A+FVGG +LRS Y++I+ T+D M NNSQEW DDGFGS+
Subjt:  FYYGLNDNTQQTTDAVFVGG-ILRSFYSQIKTTMDFMANNSQEWNDDGFGSK

A0A5D3DR17 Retrotransposon gag protein9.4e-0955.56Show/hide
Query:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGSK
        M+VFY+ L+ +TQ T  AVF GG+L+SFY+QIK+ ++ MA NSQEW+D  F S+
Subjt:  MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTATTCTATTATGGACTAAATGACAATACACAACAAACTACTGATGCTGTGTTTGTAGGAGGAATTTTGAGAAGTTTCTACAGCCAGATAAAAACAACGATGGA
CTTTATGGCCAACAATAGCCAAGAATGGAATGATGATGGCTTTGGTTCAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTATTCTATTATGGACTAAATGACAATACACAACAAACTACTGATGCTGTGTTTGTAGGAGGAATTTTGAGAAGTTTCTACAGCCAGATAAAAACAACGATGGA
CTTTATGGCCAACAATAGCCAAGAATGGAATGATGATGGCTTTGGTTCAAAGTAA
Protein sequenceShow/hide protein sequence
MKVFYYGLNDNTQQTTDAVFVGGILRSFYSQIKTTMDFMANNSQEWNDDGFGSK