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IVF0010459 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010459
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description40S ribosomal protein S13-like
Genome locationchr12:5214087..5214242
RNA-Seq ExpressionIVF0010459
SyntenyIVF0010459
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000589 - Ribosomal protein S15
IPR009068 - S15/NS1, RNA-binding
IPR023029 - Ribosomal protein S15P


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043612.1 40S ribosomal protein S13 [Cucumis melo var. makuwa]6.01e-1981.13Show/hide
Query:  MCVFLLL--SKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        +C+ ++L  S GL PEIPEDLYHLIKK VSIRKHLERNRKDKDSKFRLILVDS
Subjt:  MCVFLLL--SKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
KAA0049888.1 40S ribosomal protein S13-like [Cucumis melo var. makuwa]7.69e-1987.23Show/hide
Query:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        +L + GL PEIPEDLYHLIKK VSIRKHLERNRKDKDSKFRLILVDS
Subjt:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
KAA0051875.1 40S ribosomal protein S13-like [Cucumis melo var. makuwa]3.27e-2091.49Show/hide
Query:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        +L + GLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
Subjt:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
KAA0059571.1 40S ribosomal protein S13-like [Cucumis melo var. makuwa]1.33e-1989.36Show/hide
Query:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        +L + GLTPEIPEDLYHLIKK VSIRKHLERNRKDKDSKFRLILVDS
Subjt:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
TYK07625.1 40S ribosomal protein S13-like [Cucumis melo var. makuwa]7.69e-1987.23Show/hide
Query:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        +L + GL PEIPEDLYHLIKK VSIRKHLERNRKDKDSKFRLILVDS
Subjt:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
TrEMBL top hitse value%identityAlignment
A0A5A7TK12 40S ribosomal protein S139.2e-1481.13Show/hide
Query:  MCVFLLL--SKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        +C+ ++L  S GL PEIPEDLYHLIKK VSIRKHLERNRKDKDSKFRLILVDS
Subjt:  MCVFLLL--SKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
A0A5A7U9F0 Putative ribosomal protein S131.4e-1489.36Show/hide
Query:  MCVFLLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLI
        MCVFLLLSKGL PEIPEDLYHLIKKVVSIRKHLERNRKDKDSK + +
Subjt:  MCVFLLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLI
A0A5A7UDU2 40S ribosomal protein S13-like1.8e-1491.49Show/hide
Query:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        +L + GLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
Subjt:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
A0A5A7V1J4 40S ribosomal protein S13-like5.4e-1489.36Show/hide
Query:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        +L + GLTPEIPEDLYHLIKK VSIRKHLERNRKDKDSKFRLILVDS
Subjt:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
A8UAD8 40S ribosomal protein S131.2e-1387.23Show/hide
Query:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        +L +KGL PEIPEDLYHLIKK VSIRKHLERNRKDKDSKFRLILV+S
Subjt:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
SwissProt top hitse value%identityAlignment
P59223 40S ribosomal protein S13-13.6e-1582.98Show/hide
Query:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        +L + GL PEIPEDLYHLIKK V+IRKHLERNRKDKDSKFRLILV+S
Subjt:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
P59224 40S ribosomal protein S13-23.6e-1582.98Show/hide
Query:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        +L + GL PEIPEDLYHLIKK V+IRKHLERNRKDKDSKFRLILV+S
Subjt:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
P62299 40S ribosomal protein S132.1e-1579.59Show/hide
Query:  VFLLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        V +L +KG+ PEIPEDLYHLIKK V+IRKHLERNRKDKDSK+RLILV+S
Subjt:  VFLLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
P62300 40S ribosomal protein S132.1e-1579.59Show/hide
Query:  VFLLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        V +L +KG+ PEIPEDLYHLIKK V+IRKHLERNRKDKDSK+RLILV+S
Subjt:  VFLLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
P62302 40S ribosomal protein S131.6e-1585.11Show/hide
Query:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        +L + GL PEIPEDLYHLIKK VSIRKHLERNRKDKDSKFRLILV+S
Subjt:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
Arabidopsis top hitse value%identityAlignment
AT3G60770.1 Ribosomal protein S13/S152.5e-1682.98Show/hide
Query:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        +L + GL PEIPEDLYHLIKK V+IRKHLERNRKDKDSKFRLILV+S
Subjt:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
AT4G00100.1 ribosomal protein S13A2.5e-1682.98Show/hide
Query:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS
        +L + GL PEIPEDLYHLIKK V+IRKHLERNRKDKDSKFRLILV+S
Subjt:  LLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGTTTTTTTATTACTATCAAAAGGGCTTACTCCGGAGATTCCTGAGGATCTTTACCATTTGATTAAGAAGGTTGTCTCGATTAGAAAGCATTTGGAAAGGAATAG
GAAGGACAAAGACTCCAAGTTCAGGTTGATTCTTGTTGATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGTTTTTTTATTACTATCAAAAGGGCTTACTCCGGAGATTCCTGAGGATCTTTACCATTTGATTAAGAAGGTTGTCTCGATTAGAAAGCATTTGGAAAGGAATAG
GAAGGACAAAGACTCCAAGTTCAGGTTGATTCTTGTTGATTCTTGA
Protein sequenceShow/hide protein sequence
MCVFLLLSKGLTPEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVDS