| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_008461807.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11 [Cucumis melo] | 1.50e-78 | 100 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEAEFAKLSRDY
LKNAFEAEFAKLSRDY
Subjt: LKNAFEAEFAKLSRDY
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| XP_011651771.1 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1 [Cucumis sativus] | 6.10e-78 | 99.14 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEAEFAKLSRDY
LKNAFEAEFAK SRDY
Subjt: LKNAFEAEFAKLSRDY
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| XP_021645507.1 DNA-directed RNA polymerases II, IV and V subunit 11 [Hevea brasiliensis] | 8.34e-76 | 95.69 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFT+ERE+HTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEAEFAKLSRDY
LKNAFEAE AK S+DY
Subjt: LKNAFEAEFAKLSRDY
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| XP_022152550.1 DNA-directed RNA polymerases II, IV and V subunit 11 [Momordica charantia] | 2.91e-76 | 96.55 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPL+YKII+RIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEAEFAKLSRDY
LKNAFEAE AK SRDY
Subjt: LKNAFEAEFAKLSRDY
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| XP_022949378.1 DNA-directed RNA polymerases II, IV and V subunit 11 [Cucurbita moschata] | 2.91e-76 | 96.55 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEAEFAKLSRDY
L+N FEAEFAK SRDY
Subjt: LKNAFEAEFAKLSRDY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LCD5 RNA_pol_L_2 domain-containing protein | 2.1e-58 | 99.14 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEAEFAKLSRDY
LKNAFEAEFAK SRDY
Subjt: LKNAFEAEFAKLSRDY
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| A0A1S3CG10 DNA-directed RNA polymerases II, IV and V subunit 11 | 7.3e-59 | 100 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEAEFAKLSRDY
LKNAFEAEFAKLSRDY
Subjt: LKNAFEAEFAKLSRDY
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| A0A1S5R4J3 DNA-directed RNA polymerase | 8.9e-57 | 95.69 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFT+ERE+HTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEAEFAKLSRDY
LKNAFEAE AK S+DY
Subjt: LKNAFEAEFAKLSRDY
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| A0A6J1DE90 DNA-directed RNA polymerases II, IV and V subunit 11 | 4.0e-57 | 96.55 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPL+YKII+RIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEAEFAKLSRDY
LKNAFEAE AK SRDY
Subjt: LKNAFEAEFAKLSRDY
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| A0A6J1GBY1 DNA-directed RNA polymerases II, IV and V subunit 11 | 4.0e-57 | 96.55 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEAEFAKLSRDY
L+N FEAEFAK SRDY
Subjt: LKNAFEAEFAKLSRDY
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P52435 DNA-directed RNA polymerase II subunit RPB11-a | 1.6e-26 | 52.38 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP +E F++ EG KK++ +DTK+ NA FTI +E+HT+GNI++ QL +D VLFAGYK+PHPL++KII+R+ TT SP +A+ AI DL EL
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAF
L+ F
Subjt: LKNAF
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| Q32P79 DNA-directed RNA polymerase II subunit RPB11 | 1.6e-26 | 52.38 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP +E F++ EG KK++ +DTK+ NA FTI +E+HT+GNI++ QL +D VLFAGYK+PHPL++KII+R+ TT SP +A+ AI DL EL
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAF
L+ F
Subjt: LKNAF
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| Q38859 DNA-directed RNA polymerases II, IV and V subunit 11 | 1.4e-54 | 87.93 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP+RYERFVVPEGTKKVSY+RDTKIINAASFT+ERE+HTIGNI+RMQLHRDENVLFAGY+LPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELD+
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEAEFAKLSRDY
LKN FEAE AK S +
Subjt: LKNAFEAEFAKLSRDY
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| Q86JJ5 DNA-directed RNA polymerase II subunit rpb11 | 2.4e-27 | 47.75 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDR+E FV+P+G KKV+ RDTKI NA+ FTI +E+HTIGN++RMQL D++++FAGY++PHPL++ + +RI T + ++P++ +++ L +E
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEAEFAK
L+N+F + K
Subjt: LKNAFEAEFAK
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| Q9VJE4 DNA-directed RNA polymerase II subunit RPB11 | 1.6e-26 | 52.83 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP +E F++ EG KK+ E DTK+ NAA FTI +E+HT+GN++R QL +D NVLFAGYK+PHPL++K ++RI TT+ SP +A+ AI DL EL
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFE
+ F+
Subjt: LKNAFE
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G29540.1 RNApolymerase 14 kDa subunit | 4.4e-08 | 29.76 | Show/hide |
Query: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAEFAK
++ ASFT+ E+HT+ N +R L++D V A Y +PHP ++ +R+ TT + + + A +L + H+++ F+ A+
Subjt: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAEFAK
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| AT2G29540.2 RNApolymerase 14 kDa subunit | 4.4e-08 | 29.76 | Show/hide |
Query: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAEFAK
++ ASFT+ E+HT+ N +R L++D V A Y +PHP ++ +R+ TT + + + A +L + H+++ F+ A+
Subjt: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAEFAK
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| AT3G52090.1 DNA-directed RNA polymerase, RBP11-like | 9.8e-56 | 87.93 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP+RYERFVVPEGTKKVSY+RDTKIINAASFT+ERE+HTIGNI+RMQLHRDENVLFAGY+LPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELD+
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEAEFAKLSRDY
LKN FEAE AK S +
Subjt: LKNAFEAEFAKLSRDY
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| AT3G52090.2 DNA-directed RNA polymerase, RBP11-like | 5.5e-51 | 69.86 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVR--------------------------
MNAP+RYERFVVPEGTKKVSY+RDTKIINAASFT+ERE+HTIGNI+RMQLHRDENVLFAGY+LPHPL+YKIIVR
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVR--------------------------
Query: ----IHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAEFAKLSRDY
IHTTSQSSPMQAYNQAINDLDKELD+LKN FEAE AK S +
Subjt: ----IHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAEFAKLSRDY
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