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IVF0010498 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010498
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr03:9808885..9809133
RNA-Seq ExpressionIVF0010498
SyntenyIVF0010498
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040570.1 uncharacterized protein E6C27_scaffold262G001400 [Cucumis melo var. makuwa]2.30e-2363.1Show/hide
Query:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELEL----NHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANI
        +SG+ KFES +LQ  GE  T+ SIEEPP+LEL    NHLKYAYLR+NDTLPV+I  H+DV EEKALLN+LK HKK    TL  +
Subjt:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELEL----NHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANI

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]6.38e-3272.94Show/hide
Query:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELEL----NHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQ
        +S EKKFES +LQI GEK TKPSIEEPPELEL    NHLKY YLR+NDTLPV+ISTH+DVA+EK LLN+LK HKK   WTL +IQ
Subjt:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELEL----NHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQ

KAA0059789.1 uncharacterized protein E6C27_scaffold108G00540 [Cucumis melo var. makuwa]9.65e-3068.24Show/hide
Query:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELEL----NHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQ
        MSGEKKFE  +LQ   EK TKPSIEEPPELEL    NHLKYAYL +NDTLPVTI  ++D  +EKALL +LK  KK TRWTL +IQ
Subjt:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELEL----NHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQ

TYJ96947.1 integrase [Cucumis melo var. makuwa]6.68e-2970.59Show/hide
Query:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELEL----NHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQ
        +SGEKKFES +LQ  GEK TK SIEEPPELEL    NHLKYAYL  NDTL + ISTH+D  EEK LLN+LK HKKA  WTLA+IQ
Subjt:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELEL----NHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQ

TYK21992.1 hypothetical protein E5676_scaffold482G00250 [Cucumis melo var. makuwa]2.19e-53100Show/hide
Query:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELELNHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQP
        MSGEKKFESFNLQIGGEKNTKPSIEEPPELELNHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQP
Subjt:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELELNHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQP

TrEMBL top hitse value%identityAlignment
A0A5A7UF79 Uncharacterized protein3.7e-2572.94Show/hide
Query:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELEL----NHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQ
        +S EKKFES +LQI GEK TKPSIEEPPELEL    NHLKY YLR+NDTLPV+ISTH+DVA+EK LLN+LK HKK   WTL +IQ
Subjt:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELEL----NHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQ

A0A5D3BCU9 Integrase2.1e-2370.59Show/hide
Query:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELE----LNHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQ
        +SGEKKFES +LQ  GEK TK SIEEPPELE    LNHLKYAYL  NDTL + ISTH+D  EEK LLN+LK HKKA  WTLA+IQ
Subjt:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELE----LNHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQ

A0A5D3BM57 Uncharacterized protein1.5e-2168.24Show/hide
Query:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELEL----NHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQ
        MSGEKKFE  +LQ   EK TKPSIEEPPELEL    NHLKYAYL +NDTLPVTI  ++D  +EKALL +LK  KK TRWTL +IQ
Subjt:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELEL----NHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQ

A0A5D3C0Z2 Integrase_H2C2 domain-containing protein6.8e-1963.1Show/hide
Query:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELEL----NHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANI
        +SG+ KFES +LQ  GE  T+ SIEEPP+LEL    NHLKYAYLR+NDTLPV+I  H+DV EEKALLN+LK HKK    TL  +
Subjt:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELEL----NHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANI

A0A5D3DEG6 Uncharacterized protein3.5e-39100Show/hide
Query:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELELNHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQP
        MSGEKKFESFNLQIGGEKNTKPSIEEPPELELNHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQP
Subjt:  MSGEKKFESFNLQIGGEKNTKPSIEEPPELELNHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGCGAAAAGAAGTTCGAGTCTTTCAATCTGCAAATAGGAGGCGAAAAGAACACAAAGCCATCAATTGAAGAACCACCAGAATTAGAGCTCAACCATCTGAAGTA
TGCGTATTTGAGGAAGAATGACACTCTGCCTGTCACCATCTCCACCCACATGGATGTTGCAGAAGAAAAGGCGTTATTAAATGTGTTAAAATGCCATAAGAAGGCAACAA
GATGGACCCTGGCGAACATCCAACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGCGAAAAGAAGTTCGAGTCTTTCAATCTGCAAATAGGAGGCGAAAAGAACACAAAGCCATCAATTGAAGAACCACCAGAATTAGAGCTCAACCATCTGAAGTA
TGCGTATTTGAGGAAGAATGACACTCTGCCTGTCACCATCTCCACCCACATGGATGTTGCAGAAGAAAAGGCGTTATTAAATGTGTTAAAATGCCATAAGAAGGCAACAA
GATGGACCCTGGCGAACATCCAACCATAA
Protein sequenceShow/hide protein sequence
MSGEKKFESFNLQIGGEKNTKPSIEEPPELELNHLKYAYLRKNDTLPVTISTHMDVAEEKALLNVLKCHKKATRWTLANIQP