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IVF0010500 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010500
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUbiquitin
Genome locationchr05:22120849..22124483
RNA-Seq ExpressionIVF0010500
SyntenyIVF0010500
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056118.1 Ubiquitin [Cucumis melo var. makuwa]8.32e-65100Show/hide
Query:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGN
        MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGN
Subjt:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGN

Query:  W
        W
Subjt:  W

KAG7020821.1 hypothetical protein SDJN02_17509 [Cucurbita argyrosperma subsp. argyrosperma]2.86e-6193.2Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEINIV  NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

XP_008452565.1 PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo]2.64e-66100Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

XP_016901017.1 PREDICTED: uncharacterized protein LOC103493547 isoform X2 [Cucumis melo]7.07e-6499.03Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRK DNDFEEINIVHPNDFYQSRDADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

XP_038889494.1 uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida]1.21e-6294.17Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DNDFEEI+I+ PNDFYQSRDAD+
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

TrEMBL top hitse value%identityAlignment
A0A1S3BTJ1 uncharacterized protein LOC103493547 isoform X19.4e-50100Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

A0A1S4DYF9 uncharacterized protein LOC103493547 isoform X28.8e-4899.03Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRK DNDFEEINIVHPNDFYQSRDADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

A0A5A7UM04 Ubiquitin1.4e-48100Show/hide
Query:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGN
        MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGN
Subjt:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGN

Query:  W
        W
Subjt:  W

A0A6J1FIC7 uncharacterized protein LOC1114442042.4e-4592.23Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEI+IV  NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

A0A6J1HY58 uncharacterized protein LOC1114685512.4e-4592.23Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEI+IV  NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

SwissProt top hitse value%identityAlignment
P16709 viral Ubiquitin9.8e-0436Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLR
        M ++I+    K T   + +P ET  ++KQK+      PV  QRLI   +G+ LEDSKT+AD  ++ ++ + + LR
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLR

Arabidopsis top hitse value%identityAlignment
AT5G37640.1 ubiquitin 92.6e-0435.53Show/hide
Query:  MAMYIRIKR-HKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLR
        M+M I  K   + T  I     +T  N+K K++ +   P+  QRLI   SG++L+D +TLAD  ++ D+++ L LR
Subjt:  MAMYIRIKR-HKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLR

AT5G57860.1 Ubiquitin-like superfamily protein1.2e-3373.91Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDF
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QPV +QRL+LM + EVLEDSK+LADQKVENDAVVALTL+K+DN+FE++NI  P DF
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDF

AT5G57860.2 Ubiquitin-like superfamily protein1.2e-3373.91Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDF
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QPV +QRL+LM + EVLEDSK+LADQKVENDAVVALTL+K+DN+FE++NI  P DF
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDF

AT5G57860.3 Ubiquitin-like superfamily protein1.2e-3373.91Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDF
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QPV +QRL+LM + EVLEDSK+LADQKVENDAVVALTL+K+DN+FE++NI  P DF
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDF

AT5G57860.4 Ubiquitin-like superfamily protein6.9e-2172.73Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVEN
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QPV +QRL+LM + EVLEDSK+LADQKV +
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGTGATCCAATTGAGACAACTTTAAATATCAAGCAAAAATTAGAGTCCCTTATTGACCA
ACCAGTAGTTGACCAGCGCTTGATCCTGATGGGGAGTGGGGAAGTATTGGAGGATTCAAAGACACTGGCTGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTAACGT
TGCGAAAAGAAGATAACGACTTCGAGGAAATCAACATTGTCCATCCAAACGATTTCTACCAATCTCGTGATGCCGATTCTGGCAATTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATTTTGTTATATTTGGTCCGGGAAGATTTGTTCTTAGTATGGATGGGTTTTGATATTTTGTTATATTTGGTGGGAGAAAATGAATTAATCAGTCCAATCGAGCTTAAGTA
CTTGCGCTCATTCTTTTTAATTTTCTTCGCGATGAACTGAACGAAACGAACTTTCCCAAAGCACAAGCAAGAAACTTCTCGCCGATTCCCAGACAGCGGCAGTGGAGGCA
GTGTTTTATTGAAGTGTTGATCCACTAGTTCTTGTTTCAAGTCAACCATGGCAATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGTGATCCAATT
GAGACAACTTTAAATATCAAGCAAAAATTAGAGTCCCTTATTGACCAACCAGTAGTTGACCAGCGCTTGATCCTGATGGGGAGTGGGGAAGTATTGGAGGATTCAAAGAC
ACTGGCTGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTAACGTTGCGAAAAGAAGATAACGACTTCGAGGAAATCAACATTGTCCATCCAAACGATTTCTACCAAT
CTCGTGATGCCGATTCTGGCAATTGGTAAGGACTGAAAAATTTGCTTCAACTGTGGGTAGTATATGATGTTTACTCATCAATTTACTGTTTAAACCACTTTTCCATCTGT
TGAGTGGAAATGAAAATGATGAAAAAGAAAGTATACTCTATGCATGATTGGATATAGATTACTCCATGCTTTCTATTTGTTACCCTTTTAAGTGATATCCTCCAAGAGTT
GCACTAATGATTGAACTCATCCATGTATTGTTGTTACAACTACTAAATATGAGTTGAGGATTTTGAAAATGACTTTTTAAATTGACCTCAA
Protein sequenceShow/hide protein sequence
MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGNW