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IVF0010528 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010528
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr03:9283958..9284221
RNA-Seq ExpressionIVF0010528
SyntenyIVF0010528
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049584.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.47e-3274.68Show/hide
Query:  MEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK
        ME A YGAIVLNLSD+V+RE I EE AY MWKKL+ELY+SKDL N AY RERFFTFKMDDN  L  +LGEFK+LSS+FK
Subjt:  MEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK

KAA0059755.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.96e-56100Show/hide
Query:  MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK
        MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK
Subjt:  MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK

KAA0063883.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]6.51e-4381.61Show/hide
Query:  MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK
        MT E+KETME A YGAIVLNLSDNV+REVI E+  YGMWKKL+ELYQSKDL N AYVRERFFTFKMD N SL ENLGEFKKLSSDF+
Subjt:  MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK

TYJ96960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.55e-4380.46Show/hide
Query:  MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK
        MTQE+KETME  AYGAIVLNLSDNV++EVI EE  YGMWKKL+ELYQSKDL N AY+RERF T+KMDDN SLIENLGEFKKLS DF+
Subjt:  MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK

TYK28110.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]9.17e-3779.75Show/hide
Query:  MEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK
        ME A YGAIVLNLSDNV+REVI EE  YGMWKKL+ELYQ KDL N A+VRERFFTFKMDDN  +IENL EFKKLSS+FK
Subjt:  MEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK

TrEMBL top hitse value%identityAlignment
A0A5A7V1L8 Retrovirus-related Pol polyprotein from transposon TNT 1-943.9e-41100Show/hide
Query:  MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK
        MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK
Subjt:  MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK

A0A5A7V6Z9 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-3181.61Show/hide
Query:  MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK
        MT E+KETME A YGAIVLNLSDNV+REVI E+  YGMWKKL+ELYQSKDL N AYVRERFFTFKMD N SL ENLGEFKKLSSDF+
Subjt:  MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK

A0A5D3BAU2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.7e-3180.46Show/hide
Query:  MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK
        MTQE+KETME  AYGAIVLNLSDNV++EVI EE  YGMWKKL+ELYQSKDL N AY+RERF T+KMDDN SLIENLGEFKKLS DF+
Subjt:  MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK

A0A5D3CYB2 Retrovirus-related Pol polyprotein from transposon TNT 1-942.8e-2374.68Show/hide
Query:  MEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK
        ME A YGAIVLNLSD+V+RE I EE AY MWKKL+ELY+SKDL N AY RERFFTFKMDDN  L  +LGEFK+LSS+FK
Subjt:  MEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK

A0A5D3DXZ1 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-2679.75Show/hide
Query:  MEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK
        ME A YGAIVLNLSDNV+REVI EE  YGMWKKL+ELYQ KDL N A+VRERFFTFKMDDN  +IENL EFKKLSS+FK
Subjt:  MEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.5e-1036.59Show/hide
Query:  MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKL
        M  ED   +++ A  AI L+LSD+V+  +IDE+ A G+W +L+ LY SK LTN  Y++++ +   M +  + + +L  F  L
Subjt:  MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCAAGAAGACAAAGAAACTATGGAAAAAGCAGCCTATGGGGCTATAGTTCTAAATCTAAGTGACAATGTCATTAGGGAGGTCATTGATGAAGAAATAGCTTATGG
AATGTGGAAAAAATTGGATGAACTTTATCAGTCCAAAGACTTAACTAACTGTGCATACGTGAGAGAAAGGTTCTTTACCTTCAAGATGGATGACAACAATTCATTGATAG
AGAATCTTGGAGAATTCAAGAAGCTGTCTTCAGATTTCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCAAGAAGACAAAGAAACTATGGAAAAAGCAGCCTATGGGGCTATAGTTCTAAATCTAAGTGACAATGTCATTAGGGAGGTCATTGATGAAGAAATAGCTTATGG
AATGTGGAAAAAATTGGATGAACTTTATCAGTCCAAAGACTTAACTAACTGTGCATACGTGAGAGAAAGGTTCTTTACCTTCAAGATGGATGACAACAATTCATTGATAG
AGAATCTTGGAGAATTCAAGAAGCTGTCTTCAGATTTCAAATAA
Protein sequenceShow/hide protein sequence
MTQEDKETMEKAAYGAIVLNLSDNVIREVIDEEIAYGMWKKLDELYQSKDLTNCAYVRERFFTFKMDDNNSLIENLGEFKKLSSDFK