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IVF0010545 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010545
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr12:23833757..23834326
RNA-Seq ExpressionIVF0010545
SyntenyIVF0010545
Gene Ontology termsGO:0098869 - cellular oxidant detoxification (biological process)
GO:0004601 - peroxidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036566.1 retrotransposon protein [Cucumis melo var. makuwa]3.60e-1833.17Show/hide
Query:  GIGEKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQDG
        G  +KS YK LEM VFN  N E  I + +++F IN+    EK+KV+V+ F  +  + F  SNNRK I + EDLK+++ E FK +G G    RL  I QDG
Subjt:  GIGEKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQDG

Query:  R-------------------------------EPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLN----REPIGRVRGKPNPPKSIIIGISQRE
                                        E  L A+++SR+    E+ M + ++V DR +A+KL LN    R P G V  +    K + + +  +E
Subjt:  R-------------------------------EPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLN----REPIGRVRGKPNPPKSIIIGISQRE

KAA0043867.1 retrotransposon protein [Cucumis melo var. makuwa]1.64e-1832.52Show/hide
Query:  EKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTG---IGFRRVRLNW-----
        ++SKYK LEM +F   N E  +CR E+FF+IN+ + +EK+KV V+ F Q+E   +  S+N K + + EDLK ++ E F+ TG   +G R +R+       
Subjt:  EKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTG---IGFRRVRLNW-----

Query:  -------------------ITQD----GREPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLNREPIGRVRGKPNPPKSIIIGISQRETEEKGEKP
                           + QD    G EP L A+++SR+  T E  M   +LV DR  ALKL+     I   +G   P  + I G +++   +K E  
Subjt:  -------------------ITQD----GREPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLNREPIGRVRGKPNPPKSIIIGISQRETEEKGEKP

Query:  RRGISL
         + I++
Subjt:  RRGISL

TYJ99115.1 peroxidase 64 [Cucumis melo var. makuwa]6.95e-89100Show/hide
Query:  MLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQDGREPELHAKL
        MLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQDGREPELHAKL
Subjt:  MLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQDGREPELHAKL

Query:  MSRYLGTFENGMGKIKLVKDRKFALKLTLNREPIGRVR
        MSRYLGTFENGMGKIKLVKDRKFALKLTLNREPIGRVR
Subjt:  MSRYLGTFENGMGKIKLVKDRKFALKLTLNREPIGRVR

TYK22652.1 retrotransposon protein [Cucumis melo var. makuwa]7.51e-1934.67Show/hide
Query:  GIGEKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQDG
        G  +KS YK LEM VFN  N E  I R E++F IN+    EK+KV V+ F  +  + F  SNNRK I + EDLK+++ E FK  G G    RL  I QDG
Subjt:  GIGEKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQDG

Query:  R-------------------------------EPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLN----REPIGRVRGKPNPPKSIIIGISQRE
                                        E  L A+++SR+  T E+ M + ++V DR +A+KL LN    R P G V  +    K + + +  +E
Subjt:  R-------------------------------EPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLN----REPIGRVRGKPNPPKSIIIGISQRE

TYK27437.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]9.13e-1835.67Show/hide
Query:  LGIGEKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQD
        +G  ++SKYK LE+ VFN  N E  I R E++F IN+    EK+KV V+ F  +E + F  SNNRK ++T EDLK+++ E FK+ G G    RL  I QD
Subjt:  LGIGEKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQD

Query:  G-------------------------------REPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLN
        G                                E  L A++ SR+  T E  M + ++V DR  A+ L L+
Subjt:  G-------------------------------REPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLN

TrEMBL top hitse value%identityAlignment
A0A5A7T3B8 Retrotransposon protein5.6e-1632.85Show/hide
Query:  GIGEKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQD-
        G  +KS YK LEM VFN  N E  I + +++F IN+    EK+KV+V+ F  +  + F  SNNRK I + EDLK+++ E FK +G G    RL  I QD 
Subjt:  GIGEKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQD-

Query:  ------------------------------GREPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLN----REPIGRVRGKPNPPKSIIIGISQRET
                                      G E  L A+++SR+    E+ M + ++V DR +A+KL LN    R P G V  +    K + + +  +E 
Subjt:  ------------------------------GREPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLN----REPIGRVRGKPNPPKSIIIGISQRET

Query:  EEKGEKP
           G++P
Subjt:  EEKGEKP

A0A5D3BL87 Peroxidase 641.9e-72100Show/hide
Query:  MLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQDGREPELHAKL
        MLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQDGREPELHAKL
Subjt:  MLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQDGREPELHAKL

Query:  MSRYLGTFENGMGKIKLVKDRKFALKLTLNREPIGRVR
        MSRYLGTFENGMGKIKLVKDRKFALKLTLNREPIGRVR
Subjt:  MSRYLGTFENGMGKIKLVKDRKFALKLTLNREPIGRVR

A0A5D3DGC7 Retrotransposon protein1.5e-1634.3Show/hide
Query:  GIGEKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQD-
        G  +KS YK LEM VFN  N E  I R E++F IN+    EK+KV V+ F  +  + F  SNNRK I + EDLK+++ E FK  G G    RL  I QD 
Subjt:  GIGEKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQD-

Query:  ------------------------------GREPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLN----REPIGRVRGKPNPPKSIIIGISQRET
                                      G E  L A+++SR+  T E+ M + ++V DR +A+KL LN    R P G V  +    K + + +  +E 
Subjt:  ------------------------------GREPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLN----REPIGRVRGKPNPPKSIIIGISQRET

Query:  EEKGEKP
           G++P
Subjt:  EEKGEKP

A0A5D3DPM2 Retrotransposon protein7.3e-1632.52Show/hide
Query:  EKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTG---IGFRRVRLNW-----
        ++SKYK LEM +F   N E  +CR E+FF+IN+ + +EK+KV V+ F Q+E   +  S+N K + + EDLK ++ E F+ TG   +G R +R+       
Subjt:  EKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTG---IGFRRVRLNW-----

Query:  -------------------ITQD----GREPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLNREPIGRVRGKPNPPKSIIIGISQRETEEKGEKP
                           + QD    G EP L A+++SR+  T E  M   +LV DR  ALKL+     I   +G   P  + I G +++   +K E  
Subjt:  -------------------ITQD----GREPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLNREPIGRVRGKPNPPKSIIIGISQRETEEKGEKP

Query:  RRGISL
         + I++
Subjt:  RRGISL

A0A5D3DUJ0 Ty3/gypsy retrotransposon protein7.3e-1635.67Show/hide
Query:  LGIGEKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQD
        +G  ++SKYK LE+ VFN  N E  I R E++F IN+    EK+KV V+ F  +E + F  SNNRK ++T EDLK+++ E FK+ G G    RL  I QD
Subjt:  LGIGEKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQD

Query:  -------------------------------GREPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLN
                                       G E  L A++ SR+  T E  M + ++V DR  A+ L L+
Subjt:  -------------------------------GREPELHAKLMSRYLGTFENGMGKIKLVKDRKFALKLTLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTACTTGGAATAGGGGAGAAGAGCAAATATAAGATGTTGGAAATGTTCGTATTCAATGAAACGAATCGGGAATTTGGGATATGCAGAGATGAGTACTTTTTCAA
GATCAATGACTCAACGGTGATGGAGAAAATCAAGGTTATCGTGATAGACTTCGCTCAAAATGAAGAAAGTTGTTTCGGTCAGAGTAACAATCGTAAGATGATAAGGACAA
AGGAAGACTTGAAACAGAAGCTATGCGAGCAATTCAAAACAACCGGCATAGGATTTCGGCGAGTTCGACTAAATTGGATCACACAAGACGGGCGGGAACCGGAGTTGCAT
GCAAAATTGATGAGCCGTTATCTGGGAACTTTCGAAAATGGTATGGGGAAGATCAAGTTAGTGAAGGACCGAAAGTTTGCCCTAAAATTGACCTTGAATAGGGAGCCCAT
TGGCCGGGTAAGAGGGAAACCCAATCCTCCAAAATCCATCATAATTGGAATTTCACAGAGAGAAACGGAAGAAAAAGGGGAGAAGCCCAGACGCGGCATATCCTTATACC
CACGCAAGGAAATTACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTACTTGGAATAGGGGAGAAGAGCAAATATAAGATGTTGGAAATGTTCGTATTCAATGAAACGAATCGGGAATTTGGGATATGCAGAGATGAGTACTTTTTCAA
GATCAATGACTCAACGGTGATGGAGAAAATCAAGGTTATCGTGATAGACTTCGCTCAAAATGAAGAAAGTTGTTTCGGTCAGAGTAACAATCGTAAGATGATAAGGACAA
AGGAAGACTTGAAACAGAAGCTATGCGAGCAATTCAAAACAACCGGCATAGGATTTCGGCGAGTTCGACTAAATTGGATCACACAAGACGGGCGGGAACCGGAGTTGCAT
GCAAAATTGATGAGCCGTTATCTGGGAACTTTCGAAAATGGTATGGGGAAGATCAAGTTAGTGAAGGACCGAAAGTTTGCCCTAAAATTGACCTTGAATAGGGAGCCCAT
TGGCCGGGTAAGAGGGAAACCCAATCCTCCAAAATCCATCATAATTGGAATTTCACAGAGAGAAACGGAAGAAAAAGGGGAGAAGCCCAGACGCGGCATATCCTTATACC
CACGCAAGGAAATTACATGA
Protein sequenceShow/hide protein sequence
MDVLGIGEKSKYKMLEMFVFNETNREFGICRDEYFFKINDSTVMEKIKVIVIDFAQNEESCFGQSNNRKMIRTKEDLKQKLCEQFKTTGIGFRRVRLNWITQDGREPELH
AKLMSRYLGTFENGMGKIKLVKDRKFALKLTLNREPIGRVRGKPNPPKSIIIGISQRETEEKGEKPRRGISLYPRKEIT