; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0010584 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010584
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description50S ribosomal protein L24
Genome locationchr05:4058128..4064287
RNA-Seq ExpressionIVF0010584
SyntenyIVF0010584
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR003256 - Ribosomal protein L24
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449336.1 PREDICTED: 50S ribosomal protein L24 [Cucumis melo]1.27e-111100Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

XP_011649176.1 uncharacterized protein LOC101215964 [Cucumis sativus]6.03e-11097.48Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAA+KLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRV+RGLEASGS+IPRPEILKIR+SPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

XP_022146016.1 uncharacterized protein LOC111015327 [Momordica charantia]4.58e-10593.71Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG+IKRVIR+QNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DP TGKPCKVG RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRVSRG+ ASGSIIPRPEILKIRT+PRPTVAGPKDTPMDVVLEKTYD KTGKGMP+L
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

XP_022931187.1 uncharacterized protein LOC111437445 [Cucurbita moschata]1.60e-10594.34Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DP TGKPCKVG RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRVSRG+ ASGSIIPRPEILKIRT+PRPTVAGPKDTPMDVVLEK+YD KTGKGMP+L
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

XP_038889029.1 50S ribosomal protein L24 [Benincasa hispida]5.57e-10695.6Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DPVTGKPCKVG RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRVSRG+ ASGSIIPR EILKIRT+PRPTVAGPKDTPMDVVLEKTYD KTGKGMPEL
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

TrEMBL top hitse value%identityAlignment
A0A0A0LIP5 KOW domain-containing protein2.4e-8497.48Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAA+KLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRV+RGLEASGS+IPRPEILKIR+SPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

A0A1S3BL65 50S ribosomal protein L241.3e-85100Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

A0A6J1EXQ8 uncharacterized protein LOC1114374455.5e-8194.34Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DP TGKPCKVG RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRVSRG+ ASGSIIPRPEILKIRT+PRPTVAGPKDTPMDVVLEK+YD KTGKGMP+L
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

A0A6J1K0T3 uncharacterized protein LOC1114913635.5e-8194.34Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DP TGKPCKVG RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRVSRG+ ASGSIIPRPEILKIRT+PRPTVAGPKDTPMDVVLEK+YD KTGKGMP+L
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

B5AJV4 Ribosomal protein L241.3e-85100Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

SwissProt top hitse value%identityAlignment
A8F2D6 50S ribosomal protein L242.9e-2353.4Show/hide
Query:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVSRGLEASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G NLVKKH K  Q  EGGI T E P+H+SN+  IDP TG P KV +++LEDGSKVRV++    SG
Subjt:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVSRGLEASG

Query:  SII
         II
Subjt:  SII

C3PP96 50S ribosomal protein L242.9e-2352.43Show/hide
Query:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVSRGLEASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G N+VKKH K  Q  EGGI T E P+H+SN+  IDP TG P KV +++LEDGSKVRV++    SG
Subjt:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVSRGLEASG

Query:  SII
         II
Subjt:  SII

Q4UMR8 50S ribosomal protein L241.7e-2353.4Show/hide
Query:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVSRGLEASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G NLVKKH K  Q  EGGI T E P+H+SN+  IDP TG P KV +++LEDGSKVRV++    SG
Subjt:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVSRGLEASG

Query:  SII
         II
Subjt:  SII

Q92GX7 50S ribosomal protein L242.9e-2352.43Show/hide
Query:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVSRGLEASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G N+VKKH K  Q  EGGI T E P+H+SN+  IDP TG P KV +++LEDGSKVRV++    SG
Subjt:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVSRGLEASG

Query:  SII
         II
Subjt:  SII

Q9ZCR6 50S ribosomal protein L242.2e-2352.43Show/hide
Query:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVSRGLEASG
        K+ +GD V+II GK KG+ G + +V   +N V+V G NLVKKH K  +  EGGI T E+P+H+SN+  IDP TG P KV +++LEDGSKVRV++    SG
Subjt:  KILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVSRGLEASG

Query:  SII
         II
Subjt:  SII

Arabidopsis top hitse value%identityAlignment
AT5G23535.1 KOW domain-containing protein2.3e-7684.28Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG IKRVIR+QNRVIVEGKNL+KKHIK G  HEGGIFTVEAPLH SNVQV+DPVTG+PCKVG +YLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL
        +KVRV+RG   SGSIIPRPEILKIR +PRPT AGPKDTPM+ V E+TYD KTGKGMP+L
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL

AT5G54600.1 Translation protein SH3-like family protein1.4e-1237.5Show/hide
Query:  GDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIK-QGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVR
        GD V +I G+DKG+ G + ++    + ++++  NL  KH+K + +G  G I  +EAP+H SNV +         +VG++ LEDG KVR
Subjt:  GDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIK-QGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVR

AT5G54600.2 Translation protein SH3-like family protein6.7e-0734.48Show/hide
Query:  GDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVR
        GD V +I G+DKG+ G + ++  T N  I                  G I  +EAP+H SNV +         +VG++ LEDG KVR
Subjt:  GDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGAAGGCTGCTGAAAAGCTTATTAGGCACTGGAAAATTCTTAGAGGAGATAATGTGATGATCATTAGAGGCAAGGATAAAGGAGAAACTGGTGTAATTAAGCG
TGTTATTCGCACTCAAAATCGTGTTATTGTTGAGGGAAAAAATCTGGTGAAAAAACACATTAAACAAGGACAAGGTCATGAAGGTGGAATCTTTACAGTTGAAGCTCCCC
TCCATGTGTCGAATGTCCAAGTTATTGATCCAGTAACAGGGAAGCCTTGTAAGGTTGGTTATAGATATCTTGAAGATGGTTCTAAGGTACGAGTTTCAAGAGGATTGGAA
GCCTCTGGATCTATAATTCCTCGTCCGGAGATCTTAAAGATAAGGACTAGCCCGAGACCTACAGTTGCTGGCCCCAAGGATACTCCAATGGATGTGGTGCTGGAGAAAAC
TTATGATCCTAAAACAGGGAAGGGCATGCCTGAACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGAAGGCTGCTGAAAAGCTTATTAGGCACTGGAAAATTCTTAGAGGAGATAATGTGATGATCATTAGAGGCAAGGATAAAGGAGAAACTGGTGTAATTAAGCG
TGTTATTCGCACTCAAAATCGTGTTATTGTTGAGGGAAAAAATCTGGTGAAAAAACACATTAAACAAGGACAAGGTCATGAAGGTGGAATCTTTACAGTTGAAGCTCCCC
TCCATGTGTCGAATGTCCAAGTTATTGATCCAGTAACAGGGAAGCCTTGTAAGGTTGGTTATAGATATCTTGAAGATGGTTCTAAGGTACGAGTTTCAAGAGGATTGGAA
GCCTCTGGATCTATAATTCCTCGTCCGGAGATCTTAAAGATAAGGACTAGCCCGAGACCTACAGTTGCTGGCCCCAAGGATACTCCAATGGATGTGGTGCTGGAGAAAAC
TTATGATCCTAAAACAGGGAAGGGCATGCCTGAACTTTAA
Protein sequenceShow/hide protein sequence
MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVSRGLE
ASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL