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IVF0010602 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010602
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGypsy/ty3 element polyprotein
Genome locationchr11:16961143..16961394
RNA-Seq ExpressionIVF0010602
SyntenyIVF0010602
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038377.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]4.60e-0541.07Show/hide
Query:  GLKDMMDMVQLTEDRIETTQSTINPYWNDWKPIQKPMIKRPKGIINRIVSLAEKVP
        GL+DMMD  +L E+++E  +++  PY  D+K  QKP  K  +    +IV+LAE++P
Subjt:  GLKDMMDMVQLTEDRIETTQSTINPYWNDWKPIQKPMIKRPKGIINRIVSLAEKVP
KAA0057860.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]1.99e-0541.07Show/hide
Query:  GLKDMMDMVQLTEDRIETTQSTINPYWNDWKPIQKPMIKRPKGIINRIVSLAEKVP
        GL+DM+D  +L E+++E  +++  PY  D KP QK + K  K    +IV+LAE++P
Subjt:  GLKDMMDMVQLTEDRIETTQSTINPYWNDWKPIQKPMIKRPKGIINRIVSLAEKVP
TYK04915.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]6.32e-54100Show/hide
Query:  MGLKDMMDMVQLTEDRIETTQSTINPYWNDWKPIQKPMIKRPKGIINRIVSLAEKVPYRYELYTKSAKSLFLQLDRLRATGEM
        MGLKDMMDMVQLTEDRIETTQSTINPYWNDWKPIQKPMIKRPKGIINRIVSLAEKVPYRYELYTKSAKSLFLQLDRLRATGEM
Subjt:  MGLKDMMDMVQLTEDRIETTQSTINPYWNDWKPIQKPMIKRPKGIINRIVSLAEKVPYRYELYTKSAKSLFLQLDRLRATGEM
TYK27245.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]1.69e-0544.64Show/hide
Query:  GLKDMMDMVQLTEDRIETTQSTINPYWNDWKPIQKPMIKRPKGIINRIVSLAEKVP
        GLKDMMD  +L E+++ET  +    Y  D KP  KP IK        +V+L EKVP
Subjt:  GLKDMMDMVQLTEDRIETTQSTINPYWNDWKPIQKPMIKRPKGIINRIVSLAEKVP
TYK28460.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]4.41e-0541.07Show/hide
Query:  GLKDMMDMVQLTEDRIETTQSTINPYWNDWKPIQKPMIKRPKGIINRIVSLAEKVP
        GL+DMMD  +L E+++E  +++  PY  D+K  QKP  K  +    +IV+LAE++P
Subjt:  GLKDMMDMVQLTEDRIETTQSTINPYWNDWKPIQKPMIKRPKGIINRIVSLAEKVP
TrEMBL top hitse value%identityAlignment
A0A5D3C0P1 Gypsy/ty3 element polyprotein2.1e-39100Show/hide
Query:  MGLKDMMDMVQLTEDRIETTQSTINPYWNDWKPIQKPMIKRPKGIINRIVSLAEKVPYRYELYTKSAKSLFLQLDRLRATGEM
        MGLKDMMDMVQLTEDRIETTQSTINPYWNDWKPIQKPMIKRPKGIINRIVSLAEKVPYRYELYTKSAKSLFLQLDRLRATGEM
Subjt:  MGLKDMMDMVQLTEDRIETTQSTINPYWNDWKPIQKPMIKRPKGIINRIVSLAEKVPYRYELYTKSAKSLFLQLDRLRATGEM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTCAAGGATATGATGGATATGGTCCAACTTACTGAAGATAGGATTGAGACGACTCAGTCAACAATCAATCCATATTGGAATGACTGGAAACCAATCCAGAAGCC
CATGATCAAACGACCTAAAGGGATCATTAATCGCATTGTTAGTCTAGCTGAAAAGGTACCTTATCGATACGAACTCTACACCAAATCAGCTAAATCCCTCTTTTTGCAGC
TGGATCGACTTAGAGCTACAGGCGAGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCTCAAGGATATGATGGATATGGTCCAACTTACTGAAGATAGGATTGAGACGACTCAGTCAACAATCAATCCATATTGGAATGACTGGAAACCAATCCAGAAGCC
CATGATCAAACGACCTAAAGGGATCATTAATCGCATTGTTAGTCTAGCTGAAAAGGTACCTTATCGATACGAACTCTACACCAAATCAGCTAAATCCCTCTTTTTGCAGC
TGGATCGACTTAGAGCTACAGGCGAGATGTGA
Protein sequenceShow/hide protein sequence
MGLKDMMDMVQLTEDRIETTQSTINPYWNDWKPIQKPMIKRPKGIINRIVSLAEKVPYRYELYTKSAKSLFLQLDRLRATGEM