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IVF0010669 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010669
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr03:13652208..13652446
RNA-Seq ExpressionIVF0010669
SyntenyIVF0010669
Gene Ontology termsGO:0001510 - RNA methylation (biological process)
GO:0006412 - translation (biological process)
GO:0034470 - ncRNA processing (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045358.1 retrotransposon protein [Cucumis melo var. makuwa]2.38e-1886.67Show/hide
Query:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILTKKT
        MG QTARDT+EDDMDINLEDFDIPNP+GLEPPSGEDMPS LT  T
Subjt:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILTKKT

KAA0049608.1 uncharacterized protein E6C27_scaffold163G00610 [Cucumis melo var. makuwa]1.91e-2195.56Show/hide
Query:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILTKKT
        MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILT  T
Subjt:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILTKKT

KAA0056667.1 retrotransposon protein [Cucumis melo var. makuwa]7.38e-3375.95Show/hide
Query:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILT-------------KKTVIFRGPHGHILRKYARNFQGN
        MG QTARDT+EDDMDINLEDFDIPNP+GLEPPSGEDMPS  T             KKTVIFRGPHGHI RKYARNFQGN
Subjt:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILT-------------KKTVIFRGPHGHILRKYARNFQGN

TYK17861.1 tRNA (guanine(10)-N2)-methyltransferase-like protein [Cucumis melo var. makuwa]3.36e-1680Show/hide
Query:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILTKKT
        MG+QTA+DT+EDDMDINLEDF+IPNP+GLEPP GEDMPS LT  T
Subjt:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILTKKT

XP_008462939.1 PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]3.31e-3275.95Show/hide
Query:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILT-------------KKTVIFRGPHGHILRKYARNFQGN
        MG QTARDT+EDDMDINLEDFDIPNP+GLEPPSGEDMPS  T             KKTVIFRGPHGHI RKYARNFQGN
Subjt:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILT-------------KKTVIFRGPHGHILRKYARNFQGN

TrEMBL top hitse value%identityAlignment
A0A0A0LY11 Uncharacterized protein4.4e-1660.76Show/hide
Query:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILT-------------KKTVIFRGPHGHILRKYARNFQGN
        MG  + +  +EDDMDINLEDFDIPN +GLEPPS EDM S  T             KKT+IFRGPH HI  KYARNFQGN
Subjt:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILT-------------KKTVIFRGPHGHILRKYARNFQGN

A0A1S3CI24 uncharacterized protein At2g29880-like2.5e-2475.95Show/hide
Query:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILT-------------KKTVIFRGPHGHILRKYARNFQGN
        MG QTARDT+EDDMDINLEDFDIPNP+GLEPPSGEDMPS  T             KKTVIFRGPHGHI RKYARNFQGN
Subjt:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILT-------------KKTVIFRGPHGHILRKYARNFQGN

A0A5A7TR69 Retrotransposon protein1.5e-1386.67Show/hide
Query:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILTKKT
        MG QTARDT+EDDMDINLEDFDIPNP+GLEPPSGEDMPS LT  T
Subjt:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILTKKT

A0A5A7U2Z3 Uncharacterized protein7.4e-1695.56Show/hide
Query:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILTKKT
        MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILT  T
Subjt:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILTKKT

A0A5D3C2H8 Retrotransposon protein2.5e-2475.95Show/hide
Query:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILT-------------KKTVIFRGPHGHILRKYARNFQGN
        MG QTARDT+EDDMDINLEDFDIPNP+GLEPPSGEDMPS  T             KKTVIFRGPHGHI RKYARNFQGN
Subjt:  MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILT-------------KKTVIFRGPHGHILRKYARNFQGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTACAGACTGCAAGAGATACTGATGAAGATGACATGGACATTAATCTTGAAGACTTTGATATTCCAAATCCATATGGACTCGAGCCACCTTCGGGGGAGGACAT
GCCATCCATTCTAACAAAAAAGACGGTCATATTCAGGGGACCTCATGGACACATTTTGCGCAAGTATGCGAGAAACTTCCAAGGAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTACAGACTGCAAGAGATACTGATGAAGATGACATGGACATTAATCTTGAAGACTTTGATATTCCAAATCCATATGGACTCGAGCCACCTTCGGGGGAGGACAT
GCCATCCATTCTAACAAAAAAGACGGTCATATTCAGGGGACCTCATGGACACATTTTGCGCAAGTATGCGAGAAACTTCCAAGGAAATTAG
Protein sequenceShow/hide protein sequence
MGLQTARDTDEDDMDINLEDFDIPNPYGLEPPSGEDMPSILTKKTVIFRGPHGHILRKYARNFQGN