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IVF0010705 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010705
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr11:10031706..10032614
RNA-Seq ExpressionIVF0010705
SyntenyIVF0010705
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]9.98e-17286.42Show/hide
Query:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL
        MVDT+ASEVV  LIPNED WENVSQWSEHFQLESG+SWPKKLEV LPKTCQLGFINNNL+ELKSLWESLMPEQRA+F KAYGSIGDLLYTTINTSTLQAL
Subjt:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL

Query:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIA
        SHFWDP+LKCF FNTFDLTPTIEEYQALISLP                  SLSKFMGDIH SELKKQMKTKEGRNCIPINYLINL  GCLLGKKGLSLIA
Subjt:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIA

Query:  LCIYGTIIFHRIKGYVEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSNPWNNTRNAIREFNS
        LCIYGT+IF RIKGYVEEEVVKIFVGIERGVNPVIPIM ETFRSLNHC+IQGK KFFSCAPMLFIWISSHLRYPNNFGYPQIKF++PWN TRN IREFNS
Subjt:  LCIYGTIIFHRIKGYVEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSNPWNNTRNAIREFNS

Query:  AH
        AH
Subjt:  AH

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.21e-16286.03Show/hide
Query:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL
        MVDT+ASEVV QLIPNED WENVSQWSEHFQL+SG SWPKKLEV LPKTCQLGFINNNL+ELKSLWESLMPEQRAEFTKAYGSI DLLYTTINTSTLQAL
Subjt:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL

Query:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIA
        SHFWDP+LKCF FNTFDLTPTIEEYQALISLP                  SLSKFMGDIH SELKKQMKTKEGRNCIPINYLINL  GCLL K GLSLIA
Subjt:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIA

Query:  LCIYGTIIFHRIKGYVEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLR
        LCIYGT+IF RIKGYVEEEVVKIFVGIERGVNPVIPIM ETFRSLNHC+IQGK KFFSCAPMLFIWISSHLR
Subjt:  LCIYGTIIFHRIKGYVEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLR

KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]1.74e-18886.75Show/hide
Query:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL
        MVDT+ASEVV QLIPNED W+NVSQWSEHFQLESG+SWPKKLEV LPKTCQL FINNNL+ELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL
Subjt:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL

Query:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIA
        SHFWDP+LK F FNTFDLTPTIEEYQALISLP                  SLSKFMGDIH SELKK MKTKEGRNCIPINYLINL  GCLLGKKGLSLIA
Subjt:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIA

Query:  LCIYGTIIFHRIKGYVEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSNPWNNTRNAIREFNS
        LCIYGT+IF RIKGYVEEEVVKIFVGIERGVNPVIPIM ETFRSLNHCQIQGK KFFSCAPMLFIWISSHLRYPNNFGYPQIKFS+PWN TRN IREFNS
Subjt:  LCIYGTIIFHRIKGYVEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSNPWNNTRNAIREFNS

Query:  AH
        AH
Subjt:  AH

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.22e-9682.35Show/hide
Query:  FDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIALCIYGTIIFHRIKGY
        FDLTPTIEEY+ALISLP                  SLSKFMGDIH SELKKQ+K KEGRNCIPINYLINL  GCL  KKGLSLIALCIYGTIIF RIKGY
Subjt:  FDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIALCIYGTIIFHRIKGY

Query:  VEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSNPWNNTRNAIREFNSAH
        VEEEVVKIFVGIERGVNPVIPIM ETFRSLNHC+IQGK KFFSCAPMLFIWISSHLRYPNNFGY QIKFS+PWNNTRN IREFNSAH
Subjt:  VEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSNPWNNTRNAIREFNSAH

TYK28912.1 hypothetical protein E5676_scaffold3695G00150 [Cucumis melo var. makuwa]4.23e-91100Show/hide
Query:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL
        MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL
Subjt:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL

Query:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP
        SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP
Subjt:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase1.4e-14886.42Show/hide
Query:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL
        MVDT+ASEVV  LIPNED WENVSQWSEHFQLESG+SWPKKLEV LPKTCQLGFINNNL+ELKSLWESLMPEQRA+F KAYGSIGDLLYTTINTSTLQAL
Subjt:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL

Query:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIA
        SHFWDP+LKCF FNTFDLTPTIEEYQALISLP                  SLSKFMGDIH SELKKQMKTKEGRNCIPINYLINL  GCLLGKKGLSLIA
Subjt:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIA

Query:  LCIYGTIIFHRIKGYVEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSNPWNNTRNAIREFNS
        LCIYGT+IF RIKGYVEEEVVKIFVGIERGVNPVIPIM ETFRSLNHC+IQGK KFFSCAPMLFIWISSHLRYPNNFGYPQIKF++PWN TRN IREFNS
Subjt:  LCIYGTIIFHRIKGYVEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSNPWNNTRNAIREFNS

Query:  AH
        AH
Subjt:  AH

A0A5A7TXA1 Glial fibrillary acidic protein-like2.5e-12986.03Show/hide
Query:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL
        MVDT+ASEVV QLIPNED WENVSQWSEHFQL+SG SWPKKLEV LPKTCQLGFINNNL+ELKSLWESLMPEQRAEFTKAYGSI DLLYTTINTSTLQAL
Subjt:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL

Query:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIA
        SHFWDP+LKCF FNTFDLTPTIEEYQALISLP                  SLSKFMGDIH SELKKQMKTKEGRNCIPINYLINL  GCLL K GLSLIA
Subjt:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIA

Query:  LCIYGTIIFHRIKGYVEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLR
        LCIYGT+IF RIKGYVEEEVVKIFVGIERGVNPVIPIM ETFRSLNHC+IQGK KFFSCAPMLFIWISSHLR
Subjt:  LCIYGTIIFHRIKGYVEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLR

A0A5A7VHI3 Uncharacterized protein4.2e-14886.75Show/hide
Query:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL
        MVDT+ASEVV QLIPNED W+NVSQWSEHFQLESG+SWPKKLEV LPKTCQL FINNNL+ELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL
Subjt:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL

Query:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIA
        SHFWDP+LK F FNTFDLTPTIEEYQALISLP                  SLSKFMGDIH SELKK MKTKEGRNCIPINYLINL  GCLLGKKGLSLIA
Subjt:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIA

Query:  LCIYGTIIFHRIKGYVEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSNPWNNTRNAIREFNS
        LCIYGT+IF RIKGYVEEEVVKIFVGIERGVNPVIPIM ETFRSLNHCQIQGK KFFSCAPMLFIWISSHLRYPNNFGYPQIKFS+PWN TRN IREFNS
Subjt:  LCIYGTIIFHRIKGYVEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSNPWNNTRNAIREFNS

Query:  AH
        AH
Subjt:  AH

A0A5D3D0S2 Glial fibrillary acidic protein-like4.8e-8082.35Show/hide
Query:  FDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIALCIYGTIIFHRIKGY
        FDLTPTIEEY+ALISLP                  SLSKFMGDIH SELKKQ+K KEGRNCIPINYLINL  GCL  KKGLSLIALCIYGTIIF RIKGY
Subjt:  FDLTPTIEEYQALISLP------------------SLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIALCIYGTIIFHRIKGY

Query:  VEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSNPWNNTRNAIREFNSAH
        VEEEVVKIFVGIERGVNPVIPIM ETFRSLNHC+IQGK KFFSCAPMLFIWISSHLRYPNNFGY QIKFS+PWNNTRN IREFNSAH
Subjt:  VEEEVVKIFVGIERGVNPVIPIMVETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSNPWNNTRNAIREFNSAH

A0A5D3DZ69 Uncharacterized protein1.2e-70100Show/hide
Query:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL
        MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL
Subjt:  MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQAL

Query:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP
        SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP
Subjt:  SHFWDPMLKCFMFNTFDLTPTIEEYQALISLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGATACTTACGCGTCTGAGGTCGTTGTCCAATTGATTCCTAATGAAGACTTGTGGGAGAATGTATCTCAGTGGTCGGAACATTTTCAACTAGAGTCAGGGGTGAG
TTGGCCAAAGAAATTAGAAGTTCAACTTCCAAAGACTTGTCAGTTGGGATTCATCAACAATAACCTGAAAGAGTTAAAAAGTTTATGGGAAAGCTTAATGCCGGAGCAAA
GAGCAGAGTTTACAAAAGCATATGGAAGCATAGGTGACCTTTTATACACTACCATTAATACATCAACATTGCAAGCTTTGTCACATTTCTGGGACCCTATGTTGAAGTGT
TTCATGTTCAACACGTTCGACTTAACTCCTACTATAGAAGAATATCAAGCACTTATTAGCCTACCATCACTATCAAAGTTTATGGGTGACATTCATGTATCTGAGCTAAA
GAAACAAATGAAGACAAAAGAAGGTAGGAATTGTATTCCCATCAATTATCTCATCAATCTTGTGAGTGGTTGTTTATTAGGGAAGAAGGGTTTGTCTCTCATCGCATTAT
GTATCTATGGAACAATTATTTTTCATAGAATTAAAGGATATGTTGAAGAAGAGGTTGTTAAGATTTTTGTTGGGATAGAACGAGGGGTAAACCCTGTTATCCCAATCATG
GTAGAGACTTTCAGATCGTTAAATCATTGTCAAATCCAAGGTAAAAGAAAATTCTTCAGTTGTGCTCCTATGCTCTTCATTTGGATTTCCAGTCATCTAAGATATCCTAA
TAATTTTGGATATCCTCAAATAAAATTCAGCAACCCGTGGAATAATACAAGAAACGCTATTAGAGAATTCAATAGTGCACACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGATACTTACGCGTCTGAGGTCGTTGTCCAATTGATTCCTAATGAAGACTTGTGGGAGAATGTATCTCAGTGGTCGGAACATTTTCAACTAGAGTCAGGGGTGAG
TTGGCCAAAGAAATTAGAAGTTCAACTTCCAAAGACTTGTCAGTTGGGATTCATCAACAATAACCTGAAAGAGTTAAAAAGTTTATGGGAAAGCTTAATGCCGGAGCAAA
GAGCAGAGTTTACAAAAGCATATGGAAGCATAGGTGACCTTTTATACACTACCATTAATACATCAACATTGCAAGCTTTGTCACATTTCTGGGACCCTATGTTGAAGTGT
TTCATGTTCAACACGTTCGACTTAACTCCTACTATAGAAGAATATCAAGCACTTATTAGCCTACCATCACTATCAAAGTTTATGGGTGACATTCATGTATCTGAGCTAAA
GAAACAAATGAAGACAAAAGAAGGTAGGAATTGTATTCCCATCAATTATCTCATCAATCTTGTGAGTGGTTGTTTATTAGGGAAGAAGGGTTTGTCTCTCATCGCATTAT
GTATCTATGGAACAATTATTTTTCATAGAATTAAAGGATATGTTGAAGAAGAGGTTGTTAAGATTTTTGTTGGGATAGAACGAGGGGTAAACCCTGTTATCCCAATCATG
GTAGAGACTTTCAGATCGTTAAATCATTGTCAAATCCAAGGTAAAAGAAAATTCTTCAGTTGTGCTCCTATGCTCTTCATTTGGATTTCCAGTCATCTAAGATATCCTAA
TAATTTTGGATATCCTCAAATAAAATTCAGCAACCCGTGGAATAATACAAGAAACGCTATTAGAGAATTCAATAGTGCACACTAG
Protein sequenceShow/hide protein sequence
MVDTYASEVVVQLIPNEDLWENVSQWSEHFQLESGVSWPKKLEVQLPKTCQLGFINNNLKELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKC
FMFNTFDLTPTIEEYQALISLPSLSKFMGDIHVSELKKQMKTKEGRNCIPINYLINLVSGCLLGKKGLSLIALCIYGTIIFHRIKGYVEEEVVKIFVGIERGVNPVIPIM
VETFRSLNHCQIQGKRKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSNPWNNTRNAIREFNSAH