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IVF0010718 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010718
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibulose bisphosphate carboxylase large chain
Genome locationchr01:1567820..1568146
RNA-Seq ExpressionIVF0010718
SyntenyIVF0010718
Gene Ontology termsGO:0009853 - photorespiration (biological process)
GO:0019253 - reductive pentose-phosphate cycle (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0004497 - monooxygenase activity (molecular function)
GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domainsIPR000685 - Ribulose bisphosphate carboxylase, large subunit, C-terminal
IPR036376 - Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFG24212.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Vitis yeshanensis]2.19e-3684.29Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM
        +DF KDDENVNSQPFM WRD FLFCA+AIFKSQAETGEIKGHYLNAT  TCE+M+KRA+FARELGVPI M
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM

ANN24273.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Lactuca serriola]1.90e-3687.14Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM
        +DF KDDENVNSQPFM WRD FLFCA+AIFKSQAETGEIKGHYLNAT  TCE+MMKRAIFARELGVPI M
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM

ANN24274.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Sonchus oleraceus]2.82e-3687.14Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM
        +DF KDDENVNSQPFM WRD FLFCA+AIFKSQAETGEIKGHYLNAT  TCE+MMKRAIFARELGVPI M
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM

VDD26135.1 unnamed protein product [Brassica rapa]2.57e-3685.71Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM
        +DF KDDENVNSQPFM WRD FLFCA+AI+KSQAETGEIKGHYLNAT  TCE+MMKRAIFARELGVPI M
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM

VDD65810.1 unnamed protein product [Brassica oleracea]2.62e-3674.12Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICMTTKHVDSSRIIGTWI
        +DF KDDENVNSQPFM WRD FLFCA+AI+KSQAETGEIKGHYLNAT  TCE+MMKRAIFARELGVPI M       S  I  W+
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICMTTKHVDSSRIIGTWI

TrEMBL top hitse value%identityAlignment
A0A0Q3IYU1 Ribulose bisphosphate carboxylase large chain9.6e-2971.26Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICMTTKHVDSSRIIGTWISH
        +DF KDDENVNSQPFM WRDHF+FCA+AI+KSQAETGEIKGHYLNATV TCE+MMKRA+FARELGVPI +T  ++       T ++H
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICMTTKHVDSSRIIGTWISH

A0A3P6GJN7 Ribulose-bisphosphate carboxylase2.1e-2874.12Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICMTTKHVDSSRIIGTWI
        +DF KDDENVNSQPFM WRD FLFCA+AI+KSQAETGEIKGHYLNAT  TCE+MMKRAIFARELGVPI M       S  I  W+
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICMTTKHVDSSRIIGTWI

A0A3P6HAT8 Ribulose bisphosphate carboxylase large chain2.1e-2874.12Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICMTTKHVDSSRIIGTWI
        +DF KDDENVNSQPFM WRD FLFCA+AI+KSQAETGEIKGHYLNAT  TCE+MMKRAIFARELGVPI M       S  I  W+
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICMTTKHVDSSRIIGTWI

A7BG78 Ribulose bisphosphate carboxylase large chain (Fragment)1.6e-2884.29Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM
        +DF KDDENVNSQPFMHWRD FLFCA+AI+K+QAETGEIKGHYLNAT  TCE+MMKRA+FARELGVPI M
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM

A7BGB7 Ribulose bisphosphate carboxylase large chain (Fragment)1.6e-2884.29Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM
        +DF KDDENVNSQPFMHWRD FLFCA+A+FK+QAETGEIKGHYLNAT  TCE+MMKRA+FARELGVPI M
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM

SwissProt top hitse value%identityAlignment
P28460 Ribulose bisphosphate carboxylase large chain (Fragment)7.6e-3187.14Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM
        +DF KDDENVNSQPFM WRD FLFCA+AIFKSQAETGEIKGHYLNAT  TCE+MMKRAIFARELGVPI M
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM

P48693 Ribulose bisphosphate carboxylase large chain7.6e-3187.14Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM
        +DF KDDENVNSQPFM WRD FLFCA+AIFKSQAETGEIKGHYLNAT  TCE+MMKRAIFARELGVPI M
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM

P48706 Ribulose bisphosphate carboxylase large chain7.6e-3187.14Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM
        +DF KDDENVNSQPFM WRD FLFCA+AIFKSQAETGEIKGHYLNAT  TCE+MMKRAIFARELGVPI M
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM

Q31669 Ribulose bisphosphate carboxylase large chain (Fragment)7.6e-3187.14Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM
        +DF KDDENVNSQPFM WRD FLFCA+AIFKSQAETGEIKGHYLNAT  TCE+MMKRAIFARELGVPI M
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM

Q32042 Ribulose bisphosphate carboxylase large chain (Fragment)9.9e-3185.71Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM
        +DF KDDENVNSQPFM WRD FLFCA+AIFKSQAETGEIKGHYLNAT  TCE+MMKRA+FARELGVPI M
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM

Arabidopsis top hitse value%identityAlignment
AT2G07732.1 Ribulose bisphosphate carboxylase large chain, catalytic domain1.2e-2879.41Show/hide
Query:  FAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM
        F KDDENVNSQPFM WRD FLFCA+A++K+QAETG IKGHYLNAT  TCE+M+KRA+FARELGVPI M
Subjt:  FAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM

ATCG00490.1 ribulose-bisphosphate carboxylases4.5e-3182.86Show/hide
Query:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM
        +DF KDDENVNSQPFM WRD FLFCA+AI+KSQAETGEIKGHYLNAT  TCE+M+KRA+FARELGVPI M
Subjt:  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM

ATMG00280.1 Ribulose bisphosphate carboxylase large chain, catalytic domain7.3e-2979.41Show/hide
Query:  FAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM
        F KDDENVNSQPFM WRD FLFCA+A++K+QAETG IKGHYLNAT  TCE+M+KRA+FARELGVPI M
Subjt:  FAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTTTATTTGAAACTGGCACACACACCGATAATTGATTTTGCCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCATTGGAGAGACCATTTCCTATTTTG
TGCGAAAGCTATTTTTAAATCACAGGCTGAAACAGGTGAAATCAAAGGACATTACTTGAATGCTACTGTAGATACATGCGAAAAAATGATGAAAAGAGCTATATTTGCCC
GAGAATTGGGAGTTCCTATATGCATGACTACTAAACATGTAGATTCTTCACGAATAATTGGAACTTGGATATCTCACCTCCATGCTACAAAGAGTCTTGCTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACTTTATTTGAAACTGGCACACACACCGATAATTGATTTTGCCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCATTGGAGAGACCATTTCCTATTTTG
TGCGAAAGCTATTTTTAAATCACAGGCTGAAACAGGTGAAATCAAAGGACATTACTTGAATGCTACTGTAGATACATGCGAAAAAATGATGAAAAGAGCTATATTTGCCC
GAGAATTGGGAGTTCCTATATGCATGACTACTAAACATGTAGATTCTTCACGAATAATTGGAACTTGGATATCTCACCTCCATGCTACAAAGAGTCTTGCTAATTAA
Protein sequenceShow/hide protein sequence
MKLYLKLAHTPIIDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICMTTKHVDSSRIIGTWISHLHATKSLAN