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IVF0010721 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010721
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionFerredoxin-thioredoxin reductase catalytic chain, chloroplastic
Genome locationchr09:2935349..2937246
RNA-Seq ExpressionIVF0010721
SyntenyIVF0010721
Gene Ontology termsGO:0016730 - oxidoreductase activity, acting on iron-sulfur proteins as donors (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
GO:0103012 - ferredoxin-thioredoxin reductase activity (molecular function)
InterPro domainsIPR004209 - Ferredoxin thioredoxin reductase catalytic beta subunit
IPR036644 - Ferredoxin thioredoxin reductase catalytic beta subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142346.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucumis sativus]1.17e-10299.31Show/hide
Query:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASSFNIAVPL GSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

XP_008458720.1 PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucumis melo]1.42e-103100Show/hide
Query:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

XP_022939771.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita moschata]5.34e-9997.22Show/hide
Query:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MI QASSFNIAVPLSGS LG SRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAG DQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

XP_022989856.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita maxima]2.97e-9693.75Show/hide
Query:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASSFNIAVPLSGSS G SRH HVVRAQ EPS+KSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ I+LEDI+ATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

XP_038891226.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Benincasa hispida]1.36e-10198.61Show/hide
Query:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASSFNIAVPLSGS L CSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

TrEMBL top hitse value%identityAlignment
A0A0A0KTZ8 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic2.3e-7899.31Show/hide
Query:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASSFNIAVPL GSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

A0A1S3C819 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic4.6e-79100Show/hide
Query:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

A0A5A7T273 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic4.6e-79100Show/hide
Query:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

A0A6J1FGU2 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic1.4e-7597.22Show/hide
Query:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MI QASSFNIAVPLSGS LG SRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAG DQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

A0A6J1JZ73 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic1.4e-7597.22Show/hide
Query:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MI QASSFNIAVPLSGS LG SRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAG DQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

SwissProt top hitse value%identityAlignment
O49856 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic1.4e-6479.86Show/hide
Query:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        M  QAS+F +AVP   +     R+  VVRAQAEPS+KSVEIMRKFSEQYARKSGTYFCVDKGVT+VVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTP+NDFAGN+Q I+L++I+ +TANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

P41347 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic3.2e-5374.63Show/hide
Query:  PLSGSSLGCSRHRHVVRAQA----EPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMR
        PLS ++ G  R R  VRAQA      ++KSVE+MRKFSEQYAR+S T+FC DK VTAVVIKGLADH+DTLGAPLCPCRHYDDK AEVAQGFWNCPCVPMR
Subjt:  PLSGSSLGCSRHRHVVRAQA----EPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMR

Query:  ERKECHCMLFLTPENDFAGNDQAISLEDIRATTA
        ERKECHCMLFLTP+NDFAG DQ IS E+I+  T+
Subjt:  ERKECHCMLFLTPENDFAGNDQAISLEDIRATTA

P41348 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic3.7e-5771.22Show/hide
Query:  SSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCV
        +S   + P+S  +    R   V+RAQA+PS+KS+E+MRKFSEQ+ RKS TYFCVDK VTAVVIKGLADH+DTLGAPLCPCRHYDDK AE  QGFWNCPCV
Subjt:  SSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCV

Query:  PMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        PMRERKECHCMLFLTP+NDFAG +Q I+L++IR  T+NM
Subjt:  PMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

P41349 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic3.7e-5773.79Show/hide
Query:  LQAS-SFNIAVPLSGSSLGCSRHRH--VVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGF
        LQAS S++     S ++L    HR   V+ ++ EPS+KSVEIMRKFSEQYARKSGTYFCVDKGVT+VVIKGLA+HKD+LGAPLCPCR+YDDK AE  QGF
Subjt:  LQAS-SFNIAVPLSGSSLGCSRHRH--VVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGF

Query:  WNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        WNCPCVPMRERKECHCMLFLTPENDFAG DQ I L++IR  TANM
Subjt:  WNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

Q9SJ89 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic4.3e-5873.97Show/hide
Query:  MILQA--SSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQG
        M LQA   SF       G +   S  R V+RA+ EPSEKSVEIMRKFSEQYAR+SGTYFCVDKGVT+VVIKGLA+HKD+ GAPLCPCRHYDDK AEV QG
Subjt:  MILQA--SSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQG

Query:  FWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        FWNCPCVPMRERKECHCMLFLTP+NDFAG DQ I+ ++I+ TTANM
Subjt:  FWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

Arabidopsis top hitse value%identityAlignment
AT2G04700.1 ferredoxin thioredoxin reductase catalytic beta chain family protein3.1e-5973.97Show/hide
Query:  MILQA--SSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQG
        M LQA   SF       G +   S  R V+RA+ EPSEKSVEIMRKFSEQYAR+SGTYFCVDKGVT+VVIKGLA+HKD+ GAPLCPCRHYDDK AEV QG
Subjt:  MILQA--SSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQG

Query:  FWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        FWNCPCVPMRERKECHCMLFLTP+NDFAG DQ I+ ++I+ TTANM
Subjt:  FWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTACAAGCTTCATCCTTCAATATCGCCGTTCCACTCTCCGGTTCCTCCCTCGGATGTTCTCGTCACCGCCATGTTGTACGAGCTCAAGCGGAACCGTCCGAGAA
GTCGGTCGAAATAATGAGGAAATTCTCGGAGCAGTATGCTCGTAAGTCAGGAACGTATTTCTGTGTAGACAAGGGGGTTACTGCTGTTGTAATCAAGGGACTGGCAGATC
ACAAAGATACATTGGGAGCACCACTTTGTCCTTGTCGGCATTATGATGACAAACCTGCTGAGGTTGCACAAGGTTTTTGGAACTGTCCATGTGTGCCAATGAGAGAGAGG
AAAGAGTGTCACTGCATGCTTTTCCTGACTCCGGAAAATGACTTTGCCGGCAATGATCAGGCAATCTCCTTGGAAGATATCAGGGCAACAACAGCAAACATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTCTACAAGCTTCATCCTTCAATATCGCCGTTCCACTCTCCGGTTCCTCCCTCGGATGTTCTCGTCACCGCCATGTTGTACGAGCTCAAGCGGAACCGTCCGAGAA
GTCGGTCGAAATAATGAGGAAATTCTCGGAGCAGTATGCTCGTAAGTCAGGAACGTATTTCTGTGTAGACAAGGGGGTTACTGCTGTTGTAATCAAGGGACTGGCAGATC
ACAAAGATACATTGGGAGCACCACTTTGTCCTTGTCGGCATTATGATGACAAACCTGCTGAGGTTGCACAAGGTTTTTGGAACTGTCCATGTGTGCCAATGAGAGAGAGG
AAAGAGTGTCACTGCATGCTTTTCCTGACTCCGGAAAATGACTTTGCCGGCAATGATCAGGCAATCTCCTTGGAAGATATCAGGGCAACAACAGCAAACATGTAA
Protein sequenceShow/hide protein sequence
MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRER
KECHCMLFLTPENDFAGNDQAISLEDIRATTANM