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IVF0010773 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010773
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLOB domain-containing protein
Genome locationchr11:24905415..24905917
RNA-Seq ExpressionIVF0010773
SyntenyIVF0010773
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570762.1 LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]5.88e-2987.14Show/hide
Query:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC
        F    +IK  QELPESQRADAVSSLVYEASARIRDPVYGSA AIC LQKQVNELQAQLAKAQAEVVNMQC
Subjt:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC

XP_008463908.1 PREDICTED: LOB domain-containing protein 1-like [Cucumis melo]5.88e-2987.14Show/hide
Query:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC
        F    +IK  QELPESQRADAVSSLVYEASARIRDPVYGSA AIC LQKQVNELQAQLAKAQAEVVNMQC
Subjt:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC

XP_022943961.1 LOB domain-containing protein 1-like [Cucurbita moschata]5.58e-2987.14Show/hide
Query:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC
        F    +IK  QELPESQRADAVSSLVYEASARIRDPVYGSA AIC LQKQVNELQAQLAKAQAEVVNMQC
Subjt:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC

XP_023512010.1 LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]5.58e-2987.14Show/hide
Query:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC
        F    +IK  QELPESQRADAVSSLVYEASARIRDPVYGSA AIC LQKQVNELQAQLAKAQAEVVNMQC
Subjt:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC

XP_038902542.1 LOB domain-containing protein 1 [Benincasa hispida]5.44e-2987.14Show/hide
Query:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC
        F    +IK  QELPESQRADAVSSLVYEASARIRDPVYGSA AIC LQKQVNELQAQLAKAQAEVVNMQC
Subjt:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC

TrEMBL top hitse value%identityAlignment
A0A0A0KCM5 LOB domain-containing protein7.9e-2285.71Show/hide
Query:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC
        F    +IK  QELPESQRADAVSSLVYEASAR+RDPVYGSA AIC LQKQVNELQAQLAKAQAEVVNMQC
Subjt:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC

A0A1S3CKA7 LOB domain-containing protein 1-like6.0e-2287.14Show/hide
Query:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC
        F    +IK  QELPESQRADAVSSLVYEASARIRDPVYGSA AIC LQKQVNELQAQLAKAQAEVVNMQC
Subjt:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC

A0A5D3CSE3 LOB domain-containing protein 1-like6.0e-2287.14Show/hide
Query:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC
        F    +IK  QELPESQRADAVSSLVYEASARIRDPVYGSA AIC LQKQVNELQAQLAKAQAEVVNMQC
Subjt:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC

A0A6J1FT49 LOB domain-containing protein 1-like6.0e-2287.14Show/hide
Query:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC
        F    +IK  QELPESQRADAVSSLVYEASARIRDPVYGSA AIC LQKQVNELQAQLAKAQAEVVNMQC
Subjt:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC

A0A6J1J8I0 LOB domain-containing protein 16.0e-2287.14Show/hide
Query:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC
        F    +IK  QELPESQRADAVSSLVYEASARIRDPVYGSA AIC LQKQVNELQAQLAKAQAEVVNMQC
Subjt:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQC

SwissProt top hitse value%identityAlignment
Q8L5T5 LOB domain-containing protein 154.6e-1160Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVV
        E+PESQRADA +SLVYEA+ R+RDPVYG   AI  LQ+QV  LQA+L   ++E++
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVV

Q8LBW3 LOB domain-containing protein 122.6e-1462.12Show/hide
Query:  QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQCPTKPIL
        QELP  QRADAV+SLV+EA+AR+RDPVYG   AI  LQ QV++LQ QLA AQAE++ +Q   +P L
Subjt:  QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQCPTKPIL

Q9LQR0 LOB domain-containing protein 13.0e-1872.46Show/hide
Query:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQ
        F    +IK  QELPESQR DAV+S+VYEA ARIRDPVYG A AI  LQ+QV+ELQAQLAKAQ E+VNMQ
Subjt:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQ

Q9SHE9 LOB domain-containing protein 44.5e-1467.8Show/hide
Query:  QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQ
        QELP  QR DAVSS+VYEA+AR+RDPVYG   AI  LQ+Q++ LQAQLA AQAEVV+++
Subjt:  QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQ

Q9SK08 LOB domain-containing protein 115.6e-1763.16Show/hide
Query:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQCPTKPIL
        F    +IK  QELPESQR DAV+S+VYEA AR+RDPVYG A AI  LQ+QV+ELQAQLAK Q E+V MQ     +L
Subjt:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQCPTKPIL

Arabidopsis top hitse value%identityAlignment
AT1G07900.1 LOB domain-containing protein 12.1e-1972.46Show/hide
Query:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQ
        F    +IK  QELPESQR DAV+S+VYEA ARIRDPVYG A AI  LQ+QV+ELQAQLAKAQ E+VNMQ
Subjt:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQ

AT1G31320.1 LOB domain-containing protein 43.2e-1567.8Show/hide
Query:  QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQ
        QELP  QR DAVSS+VYEA+AR+RDPVYG   AI  LQ+Q++ LQAQLA AQAEVV+++
Subjt:  QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQ

AT2G28500.1 LOB domain-containing protein 114.0e-1863.16Show/hide
Query:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQCPTKPIL
        F    +IK  QELPESQR DAV+S+VYEA AR+RDPVYG A AI  LQ+QV+ELQAQLAK Q E+V MQ     +L
Subjt:  FFVGGVIK--QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQCPTKPIL

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein1.9e-1562.12Show/hide
Query:  QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQCPTKPIL
        QELP  QRADAV+SLV+EA+AR+RDPVYG   AI  LQ QV++LQ QLA AQAE++ +Q   +P L
Subjt:  QELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQCPTKPIL

AT2G40470.1 LOB domain-containing protein 153.3e-1260Show/hide
Query:  ELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVV
        E+PESQRADA +SLVYEA+ R+RDPVYG   AI  LQ+QV  LQA+L   ++E++
Subjt:  ELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACAACCCACTTGTCATGAACTGAAATTCTTTGTTGGGGGAGTGATTAAACAGGAACTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGC
AAGTGCAAGGATTAGAGACCCTGTTTATGGGTCAGCATGGGCCATTTGCCCACTCCAAAAGCAAGTCAATGAGCTTCAAGCCCAACTAGCCAAAGCTCAGGCAGAGGTTG
TCAACATGCAATGCCCAACCAAGCCAATCTTGTGGCCTTTGTTTGCAGGGATTGGCTCAATCTCATCAATCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACAACCCACTTGTCATGAACTGAAATTCTTTGTTGGGGGAGTGATTAAACAGGAACTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGC
AAGTGCAAGGATTAGAGACCCTGTTTATGGGTCAGCATGGGCCATTTGCCCACTCCAAAAGCAAGTCAATGAGCTTCAAGCCCAACTAGCCAAAGCTCAGGCAGAGGTTG
TCAACATGCAATGCCCAACCAAGCCAATCTTGTGGCCTTTGTTTGCAGGGATTGGCTCAATCTCATCAATCTTTTGATGAATTCAATGGCAGCCCACATAATGGATTATT
ACAGAGCATATAACCTCCATTACTTTGATGATAGCAATAATGTAACTCGTTGTGGGACCCCTTTGGACATGAATTTTATTTAGTTTTTTAGGTTGTGGATGTATGGTGTT
TGATAAATGCTCCAACGAAGTTTCTCCAAACTCTCTTGAGAGCCAAATTTGAGGTTGTGGGAA
Protein sequenceShow/hide protein sequence
MGQPTCHELKFFVGGVIKQELPESQRADAVSSLVYEASARIRDPVYGSAWAICPLQKQVNELQAQLAKAQAEVVNMQCPTKPILWPLFAGIGSISSIF