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IVF0010788 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010788
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr08:25768222..25768476
RNA-Seq ExpressionIVF0010788
SyntenyIVF0010788
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045607.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]9.98e-3877.78Show/hide
Query:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW
        MVDTYA+E V QLIPNED WENVSQWS+HFQ ESGVSW KKLEV L KTCQLGFINN LEELKSLWE+LM EH+ +FT  +
Subjt:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.85e-3781.48Show/hide
Query:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW
        MVDT+A EVVAQLIPNEDSWENVSQWS+HFQ +SG SWPKKLEV L KTCQLGFINN LEELKSLWESLMPE +A+FT  +
Subjt:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW

KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]4.23e-3780.25Show/hide
Query:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW
        MVDT+A EVVAQLIPNEDSW+NVSQWS+HFQ ESG+SWPKKLEV L KTCQL FINN LEELKSLWESLMPE +A+FT  +
Subjt:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW

TYK02649.1 hypothetical protein E5676_scaffold280G00610 [Cucumis melo var. makuwa]1.51e-3877.78Show/hide
Query:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW
        MVDTYA+E V QLIPNED WENVSQWS+HFQ ESGVSW KKLEV L KTCQLGFINN LEELKSLWE+LM EH+ +FT  +
Subjt:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW

TYK28912.1 hypothetical protein E5676_scaffold3695G00150 [Cucumis melo var. makuwa]9.91e-4181.48Show/hide
Query:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW
        MVDTYA EVV QLIPNED WENVSQWS+HFQ ESGVSWPKKLEV L KTCQLGFINN L+ELKSLWESLMPE +A+FT  +
Subjt:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase1.5e-2985.71Show/hide
Query:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKF
        MVDT+A EVVA LIPNEDSWENVSQWS+HFQ ESG+SWPKKLEV L KTCQLGFINN LEELKSLWESLMPE +AKF
Subjt:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKF

A0A5A7T0F3 Glial fibrillary acidic protein-like2.0e-2980.25Show/hide
Query:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW
        MVDTYA EVVAQLIPNED WENVSQWS+HFQ ESGVSWPKKLEV L KTCQLGFINN L+ELK LW+SLMPE +A+FT  +
Subjt:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW

A0A5A7TXA1 Glial fibrillary acidic protein-like6.7e-3081.48Show/hide
Query:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW
        MVDT+A EVVAQLIPNEDSWENVSQWS+HFQ +SG SWPKKLEV L KTCQLGFINN LEELKSLWESLMPE +A+FT  +
Subjt:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW

A0A5A7VHI3 Uncharacterized protein2.6e-2980.25Show/hide
Query:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW
        MVDT+A EVVAQLIPNEDSW+NVSQWS+HFQ ESG+SWPKKLEV L KTCQL FINN LEELKSLWESLMPE +A+FT  +
Subjt:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW

A0A5D3DZ69 Uncharacterized protein4.0e-3081.48Show/hide
Query:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW
        MVDTYA EVV QLIPNED WENVSQWS+HFQ ESGVSWPKKLEV L KTCQLGFINN L+ELKSLWESLMPE +A+FT  +
Subjt:  MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGATACTTACGCATATGAGGTCGTTGCCCAATTGATTCCTAATGAAGACTCGTGGGAGAATGTATCTCAGTGGTCGAAACATTTTCAACCAGAGTCAGGGGTGAG
TTGGCCAAAGAAATTAGAAGTTCTACTTTCAAAGACTTGTCAGTTGGGATTCATCAACAATTACCTGGAAGAGTTAAAAAGTTTATGGGAAAGCTTAATGCCGGAGCATA
AAGCAAAGTTTACAAGCATATGGAAGCATAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGATACTTACGCATATGAGGTCGTTGCCCAATTGATTCCTAATGAAGACTCGTGGGAGAATGTATCTCAGTGGTCGAAACATTTTCAACCAGAGTCAGGGGTGAG
TTGGCCAAAGAAATTAGAAGTTCTACTTTCAAAGACTTGTCAGTTGGGATTCATCAACAATTACCTGGAAGAGTTAAAAAGTTTATGGGAAAGCTTAATGCCGGAGCATA
AAGCAAAGTTTACAAGCATATGGAAGCATAGGTGA
Protein sequenceShow/hide protein sequence
MVDTYAYEVVAQLIPNEDSWENVSQWSKHFQPESGVSWPKKLEVLLSKTCQLGFINNYLEELKSLWESLMPEHKAKFTSIWKHR