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IVF0010907 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010907
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description50S ribosomal protein L15
Genome locationchr02:18535729..18536043
RNA-Seq ExpressionIVF0010907
SyntenyIVF0010907
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006412 - translation (biological process)
GO:1901135 - carbohydrate derivative metabolic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0016853 - isomerase activity (molecular function)
GO:0097367 - carbohydrate derivative binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025306.1 hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa]2.06e-2562.89Show/hide
Query:  GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASCGRRRRAEEGVLENGKAEEERKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG
        GWR+KK                  LEA+EG+VGG             GRRRRAEEGVLENGKAEE RKSWRIYWRGRKSRRRMEEEKFAPG FLKQG
Subjt:  GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASCGRRRRAEEGVLENGKAEEERKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG

KAA0034559.1 50S ribosomal protein L15 [Cucumis melo var. makuwa]6.30e-6498.08Show/hide
Query:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASCGRRRRAEEGVLENGKAEEERKSWRIYWRGRKSRRRMEEEKFAPGLF
        MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRR KASCGRRRRAEEGVLENGKAEE RKSWRIYWRGRKSRRRMEEEKFAPGLF
Subjt:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASCGRRRRAEEGVLENGKAEEERKSWRIYWRGRKSRRRMEEEKFAPGLF

Query:  LKQG
        LKQG
Subjt:  LKQG

KAA0038031.1 putative arabinose 5-phosphate isomerase [Cucumis melo var. makuwa]2.08e-3698.51Show/hide
Query:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASCGRRRRAEEGVLEN
        MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRR KASCGRRRRAEEGVLEN
Subjt:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASCGRRRRAEEGVLEN

KAA0063229.1 lon protease 2-like [Cucumis melo var. makuwa]1.56e-2362.04Show/hide
Query:  GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASC---------GRRRRAEEGVL--ENGKAEEERKSWRIYWRGRKSRRRMEEEKFA
        GWRRKK                  LEAEEGVVGG  RRRWRRKK            GRRRRA+EGVL  ENGK EE RKSWRIYWRGRKSRR MEEEKFA
Subjt:  GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASC---------GRRRRAEEGVL--ENGKAEEERKSWRIYWRGRKSRRRMEEEKFA

Query:  PGLFLKQG
           FLKQG
Subjt:  PGLFLKQG

TYK08201.1 40S ribosomal protein S15-4 [Cucumis melo var. makuwa]4.56e-1465.22Show/hide
Query:  MKDYIPDG----WRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASCGRRRRAEEGVL
        +KD  P G    WRRKKLWLETEDDD        WLEAEEGVVGGERRRRW+RKKAS      AEEGV+
Subjt:  MKDYIPDG----WRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASCGRRRRAEEGVL

TrEMBL top hitse value%identityAlignment
A0A5A7SHI4 Uncharacterized protein1.5e-1870.45Show/hide
Query:  AEEGVVGGER--------RRRWRRKKASC---------GRRRRAEEGVLENGKAEEERKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG
        AEE VVGG R           WR+KKAS          GRRRRAEEGVLENGKAEE RKSWRIYWRGRKSRRRMEEEKFAPG FLKQG
Subjt:  AEEGVVGGER--------RRRWRRKKASC---------GRRRRAEEGVLENGKAEEERKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG

A0A5A7T8R2 Putative arabinose 5-phosphate isomerase8.3e-3098.51Show/hide
Query:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASCGRRRRAEEGVLEN
        MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRR KASCGRRRRAEEGVLEN
Subjt:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASCGRRRRAEEGVLEN

A0A5D3C8N2 40S ribosomal protein S15-41.3e-1165.22Show/hide
Query:  MKDYIPD----GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASCGRRRRAEEGVL
        +KD  P     GWRRKKL        WLETEDDDWLEAEEGVVGGERRRRW+RKKAS      AEEGV+
Subjt:  MKDYIPD----GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASCGRRRRAEEGVL

A0A5D3CCS9 50S ribosomal protein L156.6e-5198.08Show/hide
Query:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASCGRRRRAEEGVLENGKAEEERKSWRIYWRGRKSRRRMEEEKFAPGLF
        MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRR KASCGRRRRAEEGVLENGKAEE RKSWRIYWRGRKSRRRMEEEKFAPGLF
Subjt:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASCGRRRRAEEGVLENGKAEEERKSWRIYWRGRKSRRRMEEEKFAPGLF

Query:  LKQG
        LKQG
Subjt:  LKQG

A0A5D3CTI7 Lon protease 2-like5.1e-1962.04Show/hide
Query:  GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKK---------ASCGRRRRAEEGVL--ENGKAEEERKSWRIYWRGRKSRRRMEEEKFA
        GWRRKK                  LEAEEGVVGG  RRRWRRKK            GRRRRA+EGVL  ENGK EE RKSWRIYWRGRKSRR MEEEKFA
Subjt:  GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKK---------ASCGRRRRAEEGVL--ENGKAEEERKSWRIYWRGRKSRRRMEEEKFA

Query:  PGLFLKQG
           FLKQG
Subjt:  PGLFLKQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGACTACATACCAGATGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACTGAAGATGACGACTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGG
CGTCGTTGGAGGCGAACGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGAGA
GAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCACGCAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTGTTTTTAAAACAAGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGACTACATACCAGATGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACTGAAGATGACGACTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGG
CGTCGTTGGAGGCGAACGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGAGA
GAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCACGCAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTGTTTTTAAAACAAGGGTAA
Protein sequenceShow/hide protein sequence
MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRKKASCGRRRRAEEGVLENGKAEEERKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG