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IVF0010911 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010911
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionBeta-galactosidase
Genome locationchr08:22943222..22943681
RNA-Seq ExpressionIVF0010911
SyntenyIVF0010911
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039144.1 Beta-galactosidase [Cucumis melo var. makuwa]8.87e-6185.04Show/hide
Query:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFS-----------ARQF
        MDLCRETVWDT NDSTQYAKLEE DRVYDFLAGLN KFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFS             QF
Subjt:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFS-----------ARQF

Query:  LCVSTARNNGTPRISVGNSTVVPQEVR
        LCVSTARNNGTPRISVGN TVVPQE++
Subjt:  LCVSTARNNGTPRISVGNSTVVPQEVR

KAA0041425.1 Beta-galactosidase [Cucumis melo var. makuwa]1.43e-6978.38Show/hide
Query:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLT----TPT--------IDSAAFSARQ
        MDLCRE+VWDTPND TQYAKLEE DRVYDFLA LNPKFD VCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVL     TP         +        Q
Subjt:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLT----TPT--------IDSAAFSARQ

Query:  FLCVSTARNNGTPRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHL
        FL VSTARNNGTPRISVGNSTVVPQEV NGPPTRNRTQDV TLVRL L
Subjt:  FLCVSTARNNGTPRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHL

KAA0042083.1 reverse transcriptase [Cucumis melo var. makuwa]1.13e-6580.71Show/hide
Query:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARQFLCVSTARNNGT
        MDLCRETVWDTPND TQY KLEE DRVYDFLAGLN KFD VCGRILGQRPLPSLMEVCFEV LEEDRTNAM V              QFLCVSTARNNGT
Subjt:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARQFLCVSTARNNGT

Query:  PRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHLLILL
        PRISVGNSTVV QEVRNGPP RN TQDVPTLVRL L  LL
Subjt:  PRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHLLILL

KAA0058176.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.69e-6482.14Show/hide
Query:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARQFLCVSTARNNGT
        MDLCRETVWDTPND TQYAKLEEAD VYDFLAGLNPKFD VCG ILGQRPLPSLMEVCFEVRLEEDRTNAMGVLT PTIDSAAFSA    C        T
Subjt:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARQFLCVSTARNNGT

Query:  PRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHLLILL
        PRISVG+STVVPQEVRN P TRN+TQDVPTLV+L L  LL
Subjt:  PRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHLLILL

KAA0065739.1 Beta-galactosidase [Cucumis melo var. makuwa]1.49e-7080.92Show/hide
Query:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFS------------ARQ
        MDLCRETVW TPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQR LPSLMEVCFEVRLEEDRTNAMGVLTT  +     +              Q
Subjt:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFS------------ARQ

Query:  FLCVSTARNNGTPRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHLLILL
        FLCVSTARNNGTPRISVGNSTVVPQEVRN PP RNRTQD+PTLVRLHLL LL
Subjt:  FLCVSTARNNGTPRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHLLILL

TrEMBL top hitse value%identityAlignment
A0A5A7T6N2 Beta-galactosidase1.2e-5285.04Show/hide
Query:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFS-----------ARQF
        MDLCRETVWDT NDSTQYAKLEE DRVYDFLAGLN KFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFS             QF
Subjt:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFS-----------ARQF

Query:  LCVSTARNNGTPRISVGNSTVVPQEVR
        LCVSTARNNGTPRISVGN TVVPQE++
Subjt:  LCVSTARNNGTPRISVGNSTVVPQEVR

A0A5A7TFU4 Reverse transcriptase5.5e-5380.71Show/hide
Query:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARQFLCVSTARNNGT
        MDLCRETVWDTPND TQY KLEE DRVYDFLAGLN KFD VCGRILGQRPLPSLMEVCFEV LEEDRTNAM V              QFLCVSTARNNGT
Subjt:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARQFLCVSTARNNGT

Query:  PRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHLLILL
        PRISVGNSTVV QEVRNGPP RN TQDVPTLVRL L  LL
Subjt:  PRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHLLILL

A0A5A7TJ19 Beta-galactosidase3.8e-5478.38Show/hide
Query:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVL----TTP--------TIDSAAFSARQ
        MDLCRE+VWDTPND TQYAKLEE DRVYDFLA LNPKFD VCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVL     TP         +        Q
Subjt:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVL----TTP--------TIDSAAFSARQ

Query:  FLCVSTARNNGTPRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHL
        FL VSTARNNGTPRISVGNSTVVPQEV NGPPTRNRTQDV TLVRL L
Subjt:  FLCVSTARNNGTPRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHL

A0A5A7UVH3 Retrovirus-related Pol polyprotein from transposon TNT 1-942.9e-5482.14Show/hide
Query:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARQFLCVSTARNNGT
        MDLCRETVWDTPND TQYAKLEEAD VYDFLAGLNPKFD VCG ILGQRPLPSLMEVCFEVRLEEDRTNAMGVLT PTIDSAAFSA    C        T
Subjt:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARQFLCVSTARNNGT

Query:  PRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHLLILL
        PRISVG+STVVPQEVRN P TRN+TQDVPTLV+L L  LL
Subjt:  PRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHLLILL

A0A5A7VJZ8 Beta-galactosidase2.7e-6080.92Show/hide
Query:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFS------------ARQ
        MDLCRETVW TPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQR LPSLMEVCFEVRLEEDRTNAMGVLTT  +     +              Q
Subjt:  MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFS------------ARQ

Query:  FLCVSTARNNGTPRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHLLILL
        FLCVSTARNNGTPRISVGNSTVVPQEVRN PP RNRTQD+PTLVRLHLL LL
Subjt:  FLCVSTARNNGTPRISVGNSTVVPQEVRNGPPTRNRTQDVPTLVRLHLLILL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGTGCAGAGAGACAGTTTGGGACACACCAAATGACAGTACACAATATGCTAAACTTGAAGAGGCTGACCGTGTTTATGACTTCCTTGCAGGACTTAATCCCAA
ATTTGATAATGTTTGTGGTCGTATACTCGGACAAAGACCTCTTCCCTCCCTAATGGAAGTTTGTTTTGAAGTCCGCCTGGAAGAGGATCGCACTAATGCCATGGGTGTAT
TGACTACCCCTACCATCGACTCCGCAGCCTTTAGCGCTCGTCAATTCCTGTGTGTGAGCACTGCAAGAAACAATGGCACACCAAGGATCAGTGTTGGAAACTCCACGGTC
GTCCCCCAGGAGGTAAGAAACGGTCCTCCAACGAGAAACAGAACTCAGGACGTGCCTACATTAGTGAGACTACACCTGCTGATCCTACTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGTGCAGAGAGACAGTTTGGGACACACCAAATGACAGTACACAATATGCTAAACTTGAAGAGGCTGACCGTGTTTATGACTTCCTTGCAGGACTTAATCCCAA
ATTTGATAATGTTTGTGGTCGTATACTCGGACAAAGACCTCTTCCCTCCCTAATGGAAGTTTGTTTTGAAGTCCGCCTGGAAGAGGATCGCACTAATGCCATGGGTGTAT
TGACTACCCCTACCATCGACTCCGCAGCCTTTAGCGCTCGTCAATTCCTGTGTGTGAGCACTGCAAGAAACAATGGCACACCAAGGATCAGTGTTGGAAACTCCACGGTC
GTCCCCCAGGAGGTAAGAAACGGTCCTCCAACGAGAAACAGAACTCAGGACGTGCCTACATTAGTGAGACTACACCTGCTGATCCTACTGTGA
Protein sequenceShow/hide protein sequence
MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARQFLCVSTARNNGTPRISVGNSTV
VPQEVRNGPPTRNRTQDVPTLVRLHLLILL