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IVF0010920 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010920
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr03:11226854..11227356
RNA-Seq ExpressionIVF0010920
SyntenyIVF0010920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032633.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.04e-2344.44Show/hide
Query:  MESINVIVDDDNYTIKNK------------SQAPRPTVLKDSSLIEEKSSTQTSNDIDNLETS------------SRECSISDYQQIL-----------S
        MESINVI+DD   T K              SQ  R T  K SSLIE   ++ + ++ID + T             + E S S  QQ             S
Subjt:  MESINVIVDDDNYTIKNK------------SQAPRPTVLKDSSLIEEKSSTQTSNDIDNLETS------------SRECSISDYQQIL-----------S

Query:  SMQNLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTNVCYTSSTEPTTVTDVLKD
        S+Q LMP  HIAKNHP ++IIGDV+S +TT KKE RDY+KMV NVCYTS+ EPT VT  L D
Subjt:  SMQNLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTNVCYTSSTEPTTVTDVLKD

KAA0033118.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.25e-3073.12Show/hide
Query:  NKSQAPRPTVLKDSSLIEEKSSTQTSNDIDNLETSSRECSISDYQQILSSMQNLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTN
        +KSQAPRPTVLKDSSLIEEKSSTQTSND                  +   + NLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTN
Subjt:  NKSQAPRPTVLKDSSLIEEKSSTQTSNDIDNLETSSRECSISDYQQILSSMQNLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTN

KAA0049939.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.04e-2952.23Show/hide
Query:  MESINVIVDDDNYTIKN------------KSQAPRPTVLKDSSLIEEKSSTQTSNDIDNLETSSRECSISDYQQIL----------------SSMQNLMP
        MESINVIVDD + T K+            KSQA R T L    +I              LE S  ECSISDYQQ                  SSMQNLM 
Subjt:  MESINVIVDDDNYTIKN------------KSQAPRPTVLKDSSLIEEKSSTQTSNDIDNLETSSRECSISDYQQIL----------------SSMQNLMP

Query:  SSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTNVCYTSSTEPTTVTDVLKDYQ
        S+++AKNHPP+AIIGD RSDITT KKEQ DY+KMV NVC+TS+ EPTTVTD LKD Q
Subjt:  SSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTNVCYTSSTEPTTVTDVLKDYQ

KAA0060524.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.13e-1944.96Show/hide
Query:  MESINVIVDDD-NYTIKNKSQAPRPTVLKDSSLIEEKSSTQTSNDIDNLETSSRECSISDYQQILSSMQ---NLMPSSHIAKNHPPSAIIGDVRSDITTW
        MESINVIVDD  N + ++  +  RP  + DS  I    S  +S   +N ++ S     S+   ++ S++    L+P +HI KNH  S+IIGDV + + T 
Subjt:  MESINVIVDDD-NYTIKNKSQAPRPTVLKDSSLIEEKSSTQTSNDIDNLETSSRECSISDYQQILSSMQ---NLMPSSHIAKNHPPSAIIGDVRSDITTW

Query:  KKEQRDYSKMVTNVCYTSSTEPTTVTDVL
        KKE+RDY+KMV NVCYTS+ EPTTVT  L
Subjt:  KKEQRDYSKMVTNVCYTSSTEPTTVTDVL

KAA0065472.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.79e-3250.3Show/hide
Query:  MESINVIVDDDNYTIK------------NKSQAPRPTVLKDSSLIEEKSSTQTSND----------IDNLETSSRECSISDYQQIL--------------
        ME INV +DD   T K            NKSQA RPT+ ++SSL +E SS + S D          + +LE SS ECSI DYQQ L              
Subjt:  MESINVIVDDDNYTIK------------NKSQAPRPTVLKDSSLIEEKSSTQTSND----------IDNLETSSRECSISDYQQIL--------------

Query:  --SSMQNLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTNVCYTSSTEPTTVTDVLKD
          SSMQ LMPS+H+AKNHP +AIIGDVRS ITT KK+QR Y KMV NVCYTS+ E  T+TD L D
Subjt:  --SSMQNLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTNVCYTSSTEPTTVTDVLKD

TrEMBL top hitse value%identityAlignment
A0A5A7SQH0 Putative mitochondrial protein1.8e-1844.44Show/hide
Query:  MESINVIVDDDNYTIKNK------------SQAPRPTVLKDSSLIEEKSSTQTSNDIDNLET------------SSRECSISDYQQIL-----------S
        MESINVI+DD   T K              SQ  R T  K SSLIE   ++ + ++ID + T             + E S S  QQ             S
Subjt:  MESINVIVDDDNYTIKNK------------SQAPRPTVLKDSSLIEEKSSTQTSNDIDNLET------------SSRECSISDYQQIL-----------S

Query:  SMQNLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTNVCYTSSTEPTTVTDVLKD
        S+Q LMP  HIAKNHP ++IIGDV+S +TT KKE RDY+KMV NVCYTS+ EPT VT  L D
Subjt:  SMQNLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTNVCYTSSTEPTTVTDVLKD

A0A5A7SRE7 Putative mitochondrial protein7.7e-2573.12Show/hide
Query:  NKSQAPRPTVLKDSSLIEEKSSTQTSNDIDNLETSSRECSISDYQQILSSMQNLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTN
        +KSQAPRPTVLKDSSLIEEKSSTQTSND                  +   + NLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTN
Subjt:  NKSQAPRPTVLKDSSLIEEKSSTQTSNDIDNLETSSRECSISDYQQILSSMQNLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTN

A0A5A7SVT6 Gag-pol polyprotein3.8e-1641.36Show/hide
Query:  MESINVIVDDD----NYTIKNK--------SQAPRPTVLKDSSLIEEKSSTQTSND------------IDNLETSSRECSISDYQQIL-----------S
        MES+NVI+DD     N +I  +        SQ  + +  + SSL  +K ++ + ++            +D+L  S+ E S+S+ QQ             S
Subjt:  MESINVIVDDD----NYTIKNK--------SQAPRPTVLKDSSLIEEKSSTQTSND------------IDNLETSSRECSISDYQQIL-----------S

Query:  SMQNLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTNVCYTSSTEPTTVTDVLKD
        SMQ ++  +HIAKNHP S+IIGDV S ITT KKE++ YSKMV NVCYTS+ EPTTVT  L D
Subjt:  SMQNLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTNVCYTSSTEPTTVTDVLKD

A0A5A7VAZ1 Putative mitochondrial protein3.4e-2550.3Show/hide
Query:  MESINVIVDDDNYTIK------------NKSQAPRPTVLKDSSLIEEKSSTQTSND----------IDNLETSSRECSISDYQQIL--------------
        ME INV +DD   T K            NKSQA RPT+ ++SSL +E SS + S D          + +LE SS ECSI DYQQ L              
Subjt:  MESINVIVDDDNYTIK------------NKSQAPRPTVLKDSSLIEEKSSTQTSND----------IDNLETSSRECSISDYQQIL--------------

Query:  --SSMQNLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTNVCYTSSTEPTTVTDVLKD
          SSMQ LMPS+H+AKNHP +AIIGDVRS ITT KK+QR Y KMV NVCYTS+ E  T+TD L D
Subjt:  --SSMQNLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTNVCYTSSTEPTTVTDVLKD

A0A5D3C707 Gag-pol polyprotein2.9e-2453.79Show/hide
Query:  MESINVIVDDDNYTIKNKSQAPRPTVLKDSSLIEEKSSTQTSNDIDNLETSSRECSISDYQQ----------------ILSSMQNLMPSSHIAKNHPPSA
        MESINVIVDD + T K++          D S  +    T+ S  +  LE S  ECSISDYQQ                  SSMQNLM S+++AKNHPP+A
Subjt:  MESINVIVDDDNYTIKNKSQAPRPTVLKDSSLIEEKSSTQTSNDIDNLETSSRECSISDYQQ----------------ILSSMQNLMPSSHIAKNHPPSA

Query:  IIGDVRSDITTWKKEQRDYSKMVTNVCYTSSTEPTTVTDVLKDYQ
        IIGD RSDITT KKEQ DY+KMV NVC+TS+ EPTTVTD LKD Q
Subjt:  IIGDVRSDITTWKKEQRDYSKMVTNVCYTSSTEPTTVTDVLKDYQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCCATCAATGTTATTGTTGATGATGACAACTATACAATCAAGAACAAGTCCCAAGCACCCAGACCTACTGTATTAAAAGATTCCTCCTTAATAGAAGAGAAGTC
GTCTACTCAGACTAGTAATGACATCGATAATCTTGAGACCAGTTCAAGAGAATGTTCTATATCTGACTATCAACAGATCCTATCTTCCATGCAGAACTTAATGCCCTCAT
CTCACATAGCTAAGAATCATCCTCCCAGTGCTATCATTGGGGATGTTAGAAGTGACATTACCACTTGGAAGAAGGAACAAAGAGACTATTCGAAAATGGTTACAAATGTA
TGTTATACATCCTCCACTGAACCTACTACAGTCACTGATGTGCTTAAAGATTATCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCCATCAATGTTATTGTTGATGATGACAACTATACAATCAAGAACAAGTCCCAAGCACCCAGACCTACTGTATTAAAAGATTCCTCCTTAATAGAAGAGAAGTC
GTCTACTCAGACTAGTAATGACATCGATAATCTTGAGACCAGTTCAAGAGAATGTTCTATATCTGACTATCAACAGATCCTATCTTCCATGCAGAACTTAATGCCCTCAT
CTCACATAGCTAAGAATCATCCTCCCAGTGCTATCATTGGGGATGTTAGAAGTGACATTACCACTTGGAAGAAGGAACAAAGAGACTATTCGAAAATGGTTACAAATGTA
TGTTATACATCCTCCACTGAACCTACTACAGTCACTGATGTGCTTAAAGATTATCAATGA
Protein sequenceShow/hide protein sequence
MESINVIVDDDNYTIKNKSQAPRPTVLKDSSLIEEKSSTQTSNDIDNLETSSRECSISDYQQILSSMQNLMPSSHIAKNHPPSAIIGDVRSDITTWKKEQRDYSKMVTNV
CYTSSTEPTTVTDVLKDYQ