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IVF0010921 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010921
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGamma-tubulin complex component
Genome locationchr10:21668153..21668533
RNA-Seq ExpressionIVF0010921
SyntenyIVF0010921
Gene Ontology termsGO:0000278 - mitotic cell cycle (biological process)
GO:0007020 - microtubule nucleation (biological process)
GO:0031122 - cytoplasmic microtubule organization (biological process)
GO:0051225 - spindle assembly (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0000922 - spindle pole (cellular component)
GO:0000923 - equatorial microtubule organizing center (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0008275 - gamma-tubulin small complex (cellular component)
GO:0043015 - gamma-tubulin binding (molecular function)
GO:0051011 - microtubule minus-end binding (molecular function)
InterPro domainsIPR007259 - Gamma-tubulin complex component protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141369.1 gamma-tubulin complex component 5 isoform X4 [Cucumis sativus]7.24e-1779.25Show/hide
Query:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
        MNEWR MDELAVL AIYLLGSG +    LT+ FNKLDKGETW+DDFELNTILQ
Subjt:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
XP_008452497.1 PREDICTED: gamma-tubulin complex component 5-like isoform X2 [Cucumis melo]7.24e-1779.25Show/hide
Query:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
        MNEWR MDELAVL AIYLLGSG +    LT+ FNKLDKGETW+DDFELNTILQ
Subjt:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
XP_008452498.1 PREDICTED: gamma-tubulin complex component 5-like isoform X3 [Cucumis melo]7.19e-1779.25Show/hide
Query:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
        MNEWR MDELAVL AIYLLGSG +    LT+ FNKLDKGETW+DDFELNTILQ
Subjt:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
XP_011654089.1 gamma-tubulin complex component 5 isoform X6 [Cucumis sativus]7.19e-1779.25Show/hide
Query:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
        MNEWR MDELAVL AIYLLGSG +    LT+ FNKLDKGETW+DDFELNTILQ
Subjt:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
XP_031740264.1 gamma-tubulin complex component 5 isoform X5 [Cucumis sativus]7.19e-1779.25Show/hide
Query:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
        MNEWR MDELAVL AIYLLGSG +    LT+ FNKLDKGETW+DDFELNTILQ
Subjt:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
TrEMBL top hitse value%identityAlignment
A0A0A0L296 Gamma-tubulin complex component1.3e-1379.25Show/hide
Query:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
        MNEWR MDELAVL AIYLLGSG +    LT+ FNKLDKGETW+DDFELNTILQ
Subjt:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
A0A1S3BTD0 Gamma-tubulin complex component1.3e-1379.25Show/hide
Query:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
        MNEWR MDELAVL AIYLLGSG +    LT+ FNKLDKGETW+DDFELNTILQ
Subjt:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
A0A5A7VD97 Gamma-tubulin complex component1.3e-1379.25Show/hide
Query:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
        MNEWR MDELAVL AIYLLGSG +    LT+ FNKLDKGETW+DDFELNTILQ
Subjt:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
A0A5C7H5U8 Gamma-tubulin complex component1.0e-1375.93Show/hide
Query:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQV
        MN+WR MDELAVL AIYLLGSG +    LT+ FNKLDKGETW+DDFELNTILQ+
Subjt:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQV
A0A5D3D9J5 Gamma-tubulin complex component1.3e-1379.25Show/hide
Query:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
        MNEWR MDELAVL AIYLLGSG +    LT+ FNKLDKGETW+DDFELNTILQ
Subjt:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20570.1 Spc97 / Spc98 family of spindle pole body (SBP) component3.6e-1162.26Show/hide
Query:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
        MNEW+ M ELAVL AIYLLGSG +    LT+ F++L KGE+  DDFELN I+Q
Subjt:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
AT1G80260.1 Spc97 / Spc98 family of spindle pole body (SBP) component4.7e-1162.26Show/hide
Query:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ
        MN+W+ M ELAVL AIYLLGSG +    LT+ F++L KGE+  DDFELN ILQ
Subjt:  MNEWRSMDELAVLCAIYLLGSG-IYGSTLTIFFNKLDKGETWEDDFELNTILQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAATGGAGATCGATGGATGAGCTTGCAGTCTTATGTGCTATTTATTTGCTAGGATCAGGGATCTACGGTAGCACTTTGACTATATTTTTCAATAAACTGGACAA
GGGAGAAACGTGGGAGGATGATTTTGAGTTGAATACTATATTACAAGTGCACTCTTGTCTTTATTTTTGCAAATATCATTATTTATACTTTAAAAAATTTTCACCCTCCA
GTTATGGGCCATCTTGTTTGCATAATCTAAAACTACCAAATAGCATTATCATGGTTATGATAAGTAATAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGAATGGAGATCGATGGATGAGCTTGCAGTCTTATGTGCTATTTATTTGCTAGGATCAGGGATCTACGGTAGCACTTTGACTATATTTTTCAATAAACTGGACAA
GGGAGAAACGTGGGAGGATGATTTTGAGTTGAATACTATATTACAAGTGCACTCTTGTCTTTATTTTTGCAAATATCATTATTTATACTTTAAAAAATTTTCACCCTCCA
GTTATGGGCCATCTTGTTTGCATAATCTAAAACTACCAAATAGCATTATCATGGTTATGATAAGTAATAGTTAA
Protein sequenceShow/hide protein sequence
MNEWRSMDELAVLCAIYLLGSGIYGSTLTIFFNKLDKGETWEDDFELNTILQVHSCLYFCKYHYLYFKKFSPSSYGPSCLHNLKLPNSIIMVMISNS