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IVF0010934 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010934
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr05:13705437..13705691
RNA-Seq ExpressionIVF0010934
SyntenyIVF0010934
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038365.1 gag/pol protein [Cucumis melo var. makuwa]7.31e-4286.9Show/hide
Query:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
        MGKGKEVEANFATTEKELVGGSSSKT+VGTLNMKKKR   TP NSEGKKVAKGKC H NE+ HWLRNC KYLAEKKAEK AQGN
Subjt:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
KAA0047525.1 gag/pol protein [Cucumis melo var. makuwa]3.47e-4285.71Show/hide
Query:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
        +GKGKEVEAN ATTEKELVGGSSSKTRVGTLNMKKKRKG TPKNS+GKKVAK KC H NED HWLRNCPKYL +KKAEK A+GN
Subjt:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
KAA0051354.1 gag/pol protein [Cucumis melo var. makuwa]9.38e-5298.81Show/hide
Query:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
        MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDH NEDEHWLRNCPKYLAEKKAEKTAQGN
Subjt:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
TYK04285.1 gag/pol protein [Cucumis melo var. makuwa]6.57e-4286.9Show/hide
Query:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
        MGKGKEVE N  TTEKELVGGSSSKTRVGTLNMKKKRKG TPKNSEGKKVAKGKC H NED HWLRNCPKYL EKKA+K AQ N
Subjt:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
TYK23861.1 gag/pol protein [Cucumis melo var. makuwa]9.75e-54100Show/hide
Query:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
        MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
Subjt:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
TrEMBL top hitse value%identityAlignment
A0A5A7TAG4 Gag/pol protein8.0e-3186.9Show/hide
Query:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
        MGKGKEVEANFATTEKELVGGSSSKT+VGTLNMKKKR   TP NSEGKKVAKGKC H NE+ HWLRNC KYLAEKKAEK AQGN
Subjt:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
A0A5A7U1L7 Gag/pol protein3.6e-3185.71Show/hide
Query:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
        +GKGKEVEAN ATTEKELVGGSSSKTRVGTLNMKKKRKG TPKNS+GKKVAK KC H NED HWLRNCPKYL +KKAEK A+GN
Subjt:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
A0A5A7U7R6 Gag/pol protein3.0e-3898.81Show/hide
Query:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
        MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDH NEDEHWLRNCPKYLAEKKAEKTAQGN
Subjt:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
A0A5D3BYQ2 Gag/pol protein1.6e-3186.9Show/hide
Query:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
        MGKGKEVE N  TTEKELVGGSSSKTRVGTLNMKKKRKG TPKNSEGKKVAKGKC H NED HWLRNCPKYL EKKA+K AQ N
Subjt:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
A0A5D3DJM1 Gag/pol protein9.4e-40100Show/hide
Query:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
        MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
Subjt:  MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAAGGGAAAGGAAGTGGAAGCAAATTTTGCTACCACAGAGAAAGAGTTAGTGGGAGGATCATCCTCTAAGACTAGAGTTGGAACTTTAAATATGAAGAAGAAGAG
AAAGGGGATGACTCCTAAGAATAGTGAGGGAAAGAAAGTTGCTAAAGGTAAATGTGACCATTGGAATGAGGACGAGCATTGGTTGAGAAATTGCCCAAAGTACCTTGCTG
AGAAGAAAGCTGAGAAGACAGCACAAGGAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAAGGGAAAGGAAGTGGAAGCAAATTTTGCTACCACAGAGAAAGAGTTAGTGGGAGGATCATCCTCTAAGACTAGAGTTGGAACTTTAAATATGAAGAAGAAGAG
AAAGGGGATGACTCCTAAGAATAGTGAGGGAAAGAAAGTTGCTAAAGGTAAATGTGACCATTGGAATGAGGACGAGCATTGGTTGAGAAATTGCCCAAAGTACCTTGCTG
AGAAGAAAGCTGAGAAGACAGCACAAGGAAACTAG
Protein sequenceShow/hide protein sequence
MGKGKEVEANFATTEKELVGGSSSKTRVGTLNMKKKRKGMTPKNSEGKKVAKGKCDHWNEDEHWLRNCPKYLAEKKAEKTAQGN