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IVF0010941 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010941
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr11:22987933..22988202
RNA-Seq ExpressionIVF0010941
SyntenyIVF0010941
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036099.1 retrotransposon protein [Cucumis melo var. makuwa]2.20e-5391.01Show/hide
Query:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII
        MGGWKSDNGTFRPGYLAQLVR+MAEKL  CQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGF WNDEEKCI+AEK+LFDNWVRV  II
Subjt:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII

KAA0046637.1 retrotransposon protein [Cucumis melo var. makuwa]6.56e-5591.01Show/hide
Query:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII
        MGGWKSDNGTFRPGYLAQLVR+MAEKL  CQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGF WNDEEKCI+A+K+LFDNWVRVW II
Subjt:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII

KAA0053616.1 retrotransposon protein [Cucumis melo var. makuwa]1.61e-5592.13Show/hide
Query:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII
        MGGWKSDNGTFRPGYLAQLVR+MAEKL  CQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGF WNDEEKCI+AEK+LFDNWVRVW II
Subjt:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII

KAA0054705.1 retrotransposon protein [Cucumis melo var. makuwa]6.04e-54100Show/hide
Query:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVR
        MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVR
Subjt:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVR

KAA0059075.1 retrotransposon protein [Cucumis melo var. makuwa]1.61e-5592.13Show/hide
Query:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII
        MGGWKSDNGTFRPGYLAQLVR+MAEKL  CQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGF WNDEEKCI+AEK+LFDNWVRVW II
Subjt:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII

TrEMBL top hitse value%identityAlignment
A0A5A7SYW1 Retrotransposon protein2.6e-4092.13Show/hide
Query:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII
        MGGWKSDNGTFR GYLAQLVR+MAEKL RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGF WNDEEKCI+AEK+LFDNWVRVW II
Subjt:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII

A0A5A7TXH6 Retrotransposon protein3.1e-4191.01Show/hide
Query:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII
        MGGWKSDNGTFRPGYLAQLVR+MAEKL  CQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGF WNDEEKCI+A+K+LFDNWVRVW II
Subjt:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII

A0A5A7UHB1 Retrotransposon protein1.1e-4192.13Show/hide
Query:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII
        MGGWKSDNGTFRPGYLAQLVR+MAEKL  CQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGF WNDEEKCI+AEK+LFDNWVRVW II
Subjt:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII

A0A5A7UZR1 Retrotransposon protein1.1e-4192.13Show/hide
Query:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII
        MGGWKSDNGTFRPGYLAQLVR+MAEKL  CQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGF WNDEEKCI+AEK+LFDNWVRVW II
Subjt:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII

A0A5D3B6Y0 Retrotransposon protein2.8e-42100Show/hide
Query:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVR
        MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVR
Subjt:  MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGATGGAAATCAGATAATGGTACGTTCCGCCCAGGATACCTTGCGCAGTTGGTACGCGTGATGGCAGAGAAACTATCTAGATGTCAGGTACGAGCAACAACTGT
AATTGATTGTAGGATCAAGACACTGAAGCGAACATTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGATTTGAGTGGAACGATGAAGAGAAATGTATCATTG
CGGAGAAGAAATTATTTGATAATTGGGTTAGGGTATGGAAAATAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGGATGGAAATCAGATAATGGTACGTTCCGCCCAGGATACCTTGCGCAGTTGGTACGCGTGATGGCAGAGAAACTATCTAGATGTCAGGTACGAGCAACAACTGT
AATTGATTGTAGGATCAAGACACTGAAGCGAACATTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGATTTGAGTGGAACGATGAAGAGAAATGTATCATTG
CGGAGAAGAAATTATTTGATAATTGGGTTAGGGTATGGAAAATAATTTAA
Protein sequenceShow/hide protein sequence
MGGWKSDNGTFRPGYLAQLVRVMAEKLSRCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFEWNDEEKCIIAEKKLFDNWVRVWKII