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IVF0010989 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010989
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionarabinogalactan peptide 22-like
Genome locationchr09:22465315..22466592
RNA-Seq ExpressionIVF0010989
SyntenyIVF0010989
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579545.1 Arabinogalactan protein 16, partial [Cucurbita argyrosperma subsp. sororia]4.14e-2576.71Show/hide
Query:  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVS
        MAVVA KIPF G+   V  VL  L PACAQSL+PAQPPA SDGTSIDQGIAY LMLLALVLTYIIHSAD  +S
Subjt:  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVS

KAG7017004.1 Arabinogalactan peptide 16 [Cucurbita argyrosperma subsp. argyrosperma]1.02e-2576.71Show/hide
Query:  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVS
        MAVVA KIPF G+ F V  VL  + PACAQSL+PAQPPA SDGTSIDQGIAY LMLLALVLTYIIHSAD  +S
Subjt:  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVS

XP_004143956.1 arabinogalactan protein 41 [Cucumis sativus]1.04e-3490.54Show/hide
Query:  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL
        MAVVACK+PF GILFVVALVLTRLS A AQSLSPAQPPAT DGTSIDQGIAY LMLLALVLTYIIHSAD YVSL
Subjt:  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL

XP_008437371.1 PREDICTED: arabinogalactan peptide 22-like [Cucumis melo]1.17e-40100Show/hide
Query:  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL
        MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL
Subjt:  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL

XP_022996281.1 arabinogalactan peptide 22-like [Cucurbita maxima]7.62e-1765.71Show/hide
Query:  KIPFSGILFVVALVLTRLSPACAQ--SLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL
        K+P+ G+L  VA VL  L PA A   SLSPAQPP  SDGTS+DQGIAY LMLLAL+LTYIIH A+  +SL
Subjt:  KIPFSGILFVVALVLTRLSPACAQ--SLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL

TrEMBL top hitse value%identityAlignment
A0A0A0KK44 Uncharacterized protein9.8e-2590.54Show/hide
Query:  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL
        MAVVACK+PF GILFVVALVLTRLS A AQSLSPAQPPAT DGTSIDQGIAY LMLLALVLTYIIHSAD YVSL
Subjt:  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL

A0A1S3ATI9 arabinogalactan peptide 22-like2.9e-29100Show/hide
Query:  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL
        MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL
Subjt:  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL

A0A5D3C2F1 Arabinogalactan peptide 22-like2.9e-29100Show/hide
Query:  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL
        MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL
Subjt:  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL

A0A6J1CXM0 arabinogalactan peptide 22-like4.0e-1068.85Show/hide
Query:  ILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVS
        + FV+   L   + A  +S+SPAQP ATSDGTSIDQGIAYALMLLALVLTYIIHSAD  +S
Subjt:  ILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVS

A0A6J1K4A3 arabinogalactan peptide 22-like3.6e-1164.94Show/hide
Query:  MAVVA-CKIPFSGILFVVALVLTRLSPACA--QSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL
        M VVA  K+P+ G+L  VA VL  L PA A   SLSPAQPP  SDGTS+DQGIAY LMLLAL+LTYIIH A+  +SL
Subjt:  MAVVA-CKIPFSGILFVVALVLTRLSPACA--QSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 162.1e-0863.33Show/hide
Query:  FSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSAD
        F+   FV A++   LS A AQSL+PA P  TSDGTSIDQGIAY LM++ALVLTY+IH  D
Subjt:  FSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSAD

Q8L9T8 Arabinogalactan protein 414.7e-0860.34Show/hide
Query:  FSGILFVVALVLTRLSP-ACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIH
        F G+  +V+++   L P A AQS +PA P  TSDGT+IDQGIAY LML+ALVLTY+IH
Subjt:  FSGILFVVALVLTRLSP-ACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIH

Q9FK16 Arabinogalactan protein 221.3e-0550Show/hide
Query:  VVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIH
        + + K P   +   V + +  L  A + S SPA P  TSDGTSIDQGIAY LM++AL LTY IH
Subjt:  VVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIH

Q9M373 Arabinogalactan protein 202.8e-0862.07Show/hide
Query:  ILFVVALVLTRLSP-ACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSAD
        ++ + A V   +SP A AQSL+PA P  TSDGTSIDQGIAY LM++ALVLTY+IH  D
Subjt:  ILFVVALVLTRLSP-ACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSAD

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 161.5e-0963.33Show/hide
Query:  FSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSAD
        F+   FV A++   LS A AQSL+PA P  TSDGTSIDQGIAY LM++ALVLTY+IH  D
Subjt:  FSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSAD

AT3G61640.1 arabinogalactan protein 202.0e-0962.07Show/hide
Query:  ILFVVALVLTRLSP-ACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSAD
        ++ + A V   +SP A AQSL+PA P  TSDGTSIDQGIAY LM++ALVLTY+IH  D
Subjt:  ILFVVALVLTRLSP-ACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSAD

AT5G24105.1 arabinogalactan protein 413.3e-0960.34Show/hide
Query:  FSGILFVVALVLTRLSP-ACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIH
        F G+  +V+++   L P A AQS +PA P  TSDGT+IDQGIAY LML+ALVLTY+IH
Subjt:  FSGILFVVALVLTRLSP-ACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIH

AT5G53250.1 arabinogalactan protein 229.1e-0750Show/hide
Query:  VVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIH
        + + K P   +   V + +  L  A + S SPA P  TSDGTSIDQGIAY LM++AL LTY IH
Subjt:  VVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTCGTTGCTTGTAAGATCCCTTTTAGTGGCATTTTGTTTGTTGTTGCTTTAGTTTTGACGAGGCTTTCCCCTGCCTGTGCTCAATCGTTGTCTCCGGCTCAACC
GCCTGCTACTAGCGATGGAACGAGCATAGATCAGGGGATTGCCTATGCATTGATGTTGTTGGCGTTGGTGCTCACCTACATTATTCATTCAGCGGATCGTTACGTCAGTT
TATAA
mRNA sequenceShow/hide mRNA sequence
ACCGCCATTGCCACGCCCTCAACCGCCGTCGTTCGTCTACACAGGGACTGTCAATTGGAGGGTTCCATCCCCTTTTGACAGTTTCAAATCATTTATCAATTCACGGCCTA
AATTCTAATAATATCTCTCTCTGCTACGCCTCTCCGGACCTTTTCTTCTCAACTTTTTCAATTCTTGAGAGACGTTGCAGAGAGAGAGAGAGAGAGAGAACTCATTCCTT
CCTTTACTAATTTTCCATTACAAGCTTCTCCTTTTTTTTCCTTTATCAATATGGCGGTCGTTGCTTGTAAGATCCCTTTTAGTGGCATTTTGTTTGTTGTTGCTTTAGTT
TTGACGAGGCTTTCCCCTGCCTGTGCTCAATCGTTGTCTCCGGCTCAACCGCCTGCTACTAGCGATGGAACGAGCATAGATCAGGGGATTGCCTATGCATTGATGTTGTT
GGCGTTGGTGCTCACCTACATTATTCATTCAGCGGATCGTTACGTCAGTTTATAAGTTCATTCTCAAAACTAATTCAGATTCAGATTTCACAGACCTGGAATGTAAAATG
GGGTTGAAGAATTTATCGTAGGAAAATACGATGTCATGGACTAAACTTCACATGTAAATGAATGAAAATGATGATTTCTTTGACCTCAATGGTGGCTATTTCTTGTCCAT
TTTCCCTTGCCAATTCTGTTTCTTTTTAAATCAATTATTGTTAACAAAGGAGAATTTTTTTTTATAGTTAGATAACAAATGATTTATGTTTATAGACTTAATTTTTAAAA
ATCAAAAATAAAAAACCAATCATTTGTTGGTTTTGATTTCTAAGAATTAAGTCTATTTTCTCCCCGTCTCTTACAACTACTTGCATTTTTAAGTACAATACTTAAATTTT
TAACAACTTCAAAAAATAAAAACAAGTTTTTTAAAGCTGTTTTTTTTAATTTTTCAACTTTTTGCTTAGTTTTCTAAACCAACAAATAATAATAATAATAATAACAAATG
AAAAAAGTCAGGTAAAATAGTATCTATAAGCTTAATTTAAGAAGCACACGACTTGAATAGTGCAACAAATGTGTTAGACATGCATATTGTTGAGTAGACAAGCGTAAAAA
TACACCACCAAACTAAGTTTTTAAACATATAAATCATCAATTTATTTACATTGAATTTTCTTATACGAAATGATATATATTTT
Protein sequenceShow/hide protein sequence
MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALVLTYIIHSADRYVSL