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IVF0010996 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0010996
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationchr04:19838096..19838523
RNA-Seq ExpressionIVF0010996
SyntenyIVF0010996
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037812.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]5.74e-4986.52Show/hide
Query:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG
        MST+RSIP EI HKARTN G+NISYQKAWRAKE+MVK+LHGDTVESYALIP FFDKLVESN GTCTALEMDD G+FKFCFM FGASIEG
Subjt:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG

KAA0041797.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]4.35e-4885.39Show/hide
Query:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG
        MS DRSI KEI HK RTN GVNISYQKAWRAKE+MVK+LHGDTVESYALIP FFDKLVESN GTCTALE+DD G+FKFCFM FGASIEG
Subjt:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG

KAA0052073.1 uncharacterized protein E6C27_scaffold578G00430 [Cucumis melo var. makuwa]2.04e-4984.27Show/hide
Query:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG
        +STDRSIP+EI HKARTN GVNISYQKAWRAKE+MVK+LHGDTVE+YALIP FFDKLVESN GTCT LEMD+ G+FKFCFM FGASIEG
Subjt:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG

KAA0068086.1 uncharacterized protein E6C27_scaffold238G00380 [Cucumis melo var. makuwa]7.00e-60100Show/hide
Query:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG
        MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG
Subjt:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG

TYK02872.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]6.29e-5086.52Show/hide
Query:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG
        MST+RSIP EI HKARTN G+NISYQKAWRAKE+MVK+LHGDTVESYALIP FFDKLVESN GTCTALEMDD G+FKFCFM FGASIEG
Subjt:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG

TrEMBL top hitse value%identityAlignment
A0A5A7T2W2 Protein FAR1-RELATED SEQUENCE 42.7e-3786.52Show/hide
Query:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG
        MST+RSIP EI HKARTN G+NISYQKAWRAKE+MVK+LHGDTVESYALIP FFDKLVESN GTCTALEMDD G+FKFCFM FGASIEG
Subjt:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG

A0A5A7V7F3 Protein FAR1-RELATED SEQUENCE 46.0e-3786.52Show/hide
Query:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG
        MSTD SIPKEI HKARTN GVNISYQKAWRAKE+MVK+LHGD  ESYALIP FFDKLVESN GTCTALEMDD G+FKFCFM FGASIEG
Subjt:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG

A0A5A7VNC8 Uncharacterized protein3.9e-44100Show/hide
Query:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG
        MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG
Subjt:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG

A0A5D3BN82 Uncharacterized protein2.3e-3684.27Show/hide
Query:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG
        +STDRSIP+EI HKARTN GVNISYQKAWRAKE+MVK+LHGDTVE+YALIP FFDKLVESN GTCT LEMD+ G+FKFCFM FGASIEG
Subjt:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG

A0A5D3BVN2 Protein FAR1-RELATED SEQUENCE 42.7e-3786.52Show/hide
Query:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG
        MST+RSIP EI HKARTN G+NISYQKAWRAKE+MVK+LHGDTVESYALIP FFDKLVESN GTCTALEMDD G+FKFCFM FGASIEG
Subjt:  MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTGATCGTTCCATTCCTAAAGAAATTGCGCATAAGGCTCGTACAAATTTTGGAGTTAATATAAGTTACCAGAAAGCTTGGAGGGCAAAAGAATATATGGTAAA
GCTATTACATGGTGACACAGTTGAATCGTATGCATTGATTCCAATATTCTTTGATAAATTGGTTGAATCTAACCTAGGTACATGCACTGCTTTAGAAATGGATGATATGG
GTAATTTCAAGTTTTGCTTTATGACTTTTGGTGCATCAATTGAGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTGATCGTTCCATTCCTAAAGAAATTGCGCATAAGGCTCGTACAAATTTTGGAGTTAATATAAGTTACCAGAAAGCTTGGAGGGCAAAAGAATATATGGTAAA
GCTATTACATGGTGACACAGTTGAATCGTATGCATTGATTCCAATATTCTTTGATAAATTGGTTGAATCTAACCTAGGTACATGCACTGCTTTAGAAATGGATGATATGG
GTAATTTCAAGTTTTGCTTTATGACTTTTGGTGCATCAATTGAGGGGTGA
Protein sequenceShow/hide protein sequence
MSTDRSIPKEIAHKARTNFGVNISYQKAWRAKEYMVKLLHGDTVESYALIPIFFDKLVESNLGTCTALEMDDMGNFKFCFMTFGASIEG