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IVF0011000 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011000
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr10:15886249..15886512
RNA-Seq ExpressionIVF0011000
SyntenyIVF0011000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062151.1 retrotransposon protein [Cucumis melo var. makuwa]2.20e-2769.51Show/hide
Query:  AVSDEHVTEGSGPTWLDRTRSTSTTKRPWRYRDDGATTKAKMETYRCLTDARTTRDLTRKGRNADKVERGWLPGLSGSTEAG
        AVSD HVTEGSGPT LD T    T KRPWRYRDDG+TTKAK ET+R L DART +DLTRKGR+ D+VE  WLPGL    E G
Subjt:  AVSDEHVTEGSGPTWLDRTRSTSTTKRPWRYRDDGATTKAKMETYRCLTDARTTRDLTRKGRNADKVERGWLPGLSGSTEAG
TrEMBL top hitse value%identityAlignment
A0A5A7V8Y5 Retrotransposon protein9.1e-2269.51Show/hide
Query:  AVSDEHVTEGSGPTWLDRTRSTSTTKRPWRYRDDGATTKAKMETYRCLTDARTTRDLTRKGRNADKVERGWLPGLSGSTEAG
        AVSD HVTEGSGPT LD T    T KRPWRYRDDG+TTKAK ET+R L DART +DLTRKGR+ D+VE  WLPGL    E G
Subjt:  AVSDEHVTEGSGPTWLDRTRSTSTTKRPWRYRDDGATTKAKMETYRCLTDARTTRDLTRKGRNADKVERGWLPGLSGSTEAG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTAAGCGACGAACACGTGACGGAGGGTAGCGGACCTACATGGCTCGACAGAACACGCTCGACTTCAACGACGAAACGACCATGGAGATACCGAGACGACGGAGC
AACGACGAAGGCGAAGATGGAGACCTACCGATGCTTGACGGACGCACGAACGACCAGAGACTTGACGAGAAAGGGAAGAAATGCGGATAAGGTTGAGCGCGGCTGGCTGC
CAGGGTTGAGCGGTTCGACGGAGGCAGGCGGCTACGGATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTAAGCGACGAACACGTGACGGAGGGTAGCGGACCTACATGGCTCGACAGAACACGCTCGACTTCAACGACGAAACGACCATGGAGATACCGAGACGACGGAGC
AACGACGAAGGCGAAGATGGAGACCTACCGATGCTTGACGGACGCACGAACGACCAGAGACTTGACGAGAAAGGGAAGAAATGCGGATAAGGTTGAGCGCGGCTGGCTGC
CAGGGTTGAGCGGTTCGACGGAGGCAGGCGGCTACGGATTGTGA
Protein sequenceShow/hide protein sequence
MAVSDEHVTEGSGPTWLDRTRSTSTTKRPWRYRDDGATTKAKMETYRCLTDARTTRDLTRKGRNADKVERGWLPGLSGSTEAGGYGL