; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0011033 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011033
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr06:19331941..19332851
RNA-Seq ExpressionIVF0011033
SyntenyIVF0011033
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033896.1 retrotransposon protein [Cucumis melo var. makuwa]3.06e-8854.33Show/hide
Query:  IGELSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQTILGFTSKGTMKLKG
        + E  VKCLSD+EFRARLDKGLCF CNDKYS  H CK   NRELM FI N +E+ E  + K E + + VE ETL++K +T+I+L+TILGFTSKGTMKL+G
Subjt:  IGELSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQTILGFTSKGTMKLKG

Query:  TVQDREVIILIDIGATHNFIHQRVA-----------KFRVTIGDGNTSEGKGIYKRLE---------------------------WLNMTGFMDVYWSSM
        T++ R+VIILID GATHNFIHQ +            KF VTIGDG T EGKGI K++E                           WL+ T FM ++W SM
Subjt:  TVQDREVIILIDIGATHNFIHQRVA-----------KFRVTIGDGNTSEGKGIYKRLE---------------------------WLNMTGFMDVYWSSM

Query:  TMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDMLKELP
         M FM     V+LKGD SLTKAECSL T+ KTWEEE  GFLLEF  V+I     DES++EE+GEE  LPMIRNLL R++ +F+  K LP
Subjt:  TMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDMLKELP

KAA0046910.1 retrotransposon protein [Cucumis melo var. makuwa]1.59e-14984.53Show/hide
Query:  MKQITIPIKGNYAIGELSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQTI
        MKQITIPIKGNYAIGELSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQTI
Subjt:  MKQITIPIKGNYAIGELSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQTI

Query:  LGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRVAKFRVTIGDGNTSEGKGIYKRLEWLNMTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECS
        LGFTSKGTMKLKGTVQDR                                         EWLNMTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECS
Subjt:  LGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRVAKFRVTIGDGNTSEGKGIYKRLEWLNMTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECS

Query:  LKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDMLKELPL
        LKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDMLKELPL
Subjt:  LKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDMLKELPL

KAA0062448.1 disease resistance protein [Cucumis melo var. makuwa]9.75e-8954.61Show/hide
Query:  MKQITIPIKGNYAIGE--LSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQ
        MKQ+T+PIKGN+   E    VK LSD+EFRARLDKGLCF+CNDKYS  H CK   NRELM FI NE E+    E K +   +  EL +L +K  ++I+L+
Subjt:  MKQITIPIKGNYAIGE--LSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQ

Query:  TILGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRVA-----------KFRVTIGDGNTSEGKGIYKRLE---------------------------
        TILGFTSKGTMK++GT+ DREVIILID GATHNFIH+ V            KF VTIGDG   EG GI K +E                           
Subjt:  TILGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRVA-----------KFRVTIGDGNTSEGKGIYKRLE---------------------------

Query:  WLNMTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDML
        WL+ TGFM+++W SMTM FMV   QVILKGD SLTKAECSLKT+SKTWEEE QGFL+EF  ++I   +  ES++EE+GEE NLPMIRNLL + + +F++ 
Subjt:  WLNMTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDML

Query:  KELP
        K LP
Subjt:  KELP

TYK01280.1 retrotransposon protein [Cucumis melo var. makuwa]2.02e-8854.33Show/hide
Query:  IGELSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQTILGFTSKGTMKLKG
        + E  VKCLSD+EFRARLDKGLCF CNDKYS  H CK   NRELM FI N +E+ E  + K E + + VE ETL++K +T+I+L+TILGFTSKGTMKL+G
Subjt:  IGELSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQTILGFTSKGTMKLKG

Query:  TVQDREVIILIDIGATHNFIHQRV-----------AKFRVTIGDGNTSEGKGIYKRLE---------------------------WLNMTGFMDVYWSSM
        T++ R+VIILID GATHNFIHQ +            KF VTIGDG T EGKGI K++E                           WL++T FM ++W SM
Subjt:  TVQDREVIILIDIGATHNFIHQRV-----------AKFRVTIGDGNTSEGKGIYKRLE---------------------------WLNMTGFMDVYWSSM

Query:  TMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDMLKELP
         M FM     V+LKGD SLTKAECSL T+ KTWEEE  GFLLEF  V+I     DES++EE+GEE  LPMIRNLL R++ +F+  K LP
Subjt:  TMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDMLKELP

TYK27437.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]7.42e-8854.61Show/hide
Query:  MKQITIPIKGNYAIGE--LSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQ
        MKQ+T+PIKGN+   E    VK LSD+EFRARLDKGLCF+CNDKYS  H CK   NRELM FI NE E+    E K +   +  EL +L +K  ++I+L+
Subjt:  MKQITIPIKGNYAIGE--LSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQ

Query:  TILGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRVA-----------KFRVTIGDGNTSEGKGIYKRLE---------------------------
        TILGFTSKGTMK++GT+ DREVIILID GATHNFIH+ V            KF VTIGDG   EG GI K +E                           
Subjt:  TILGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRVA-----------KFRVTIGDGNTSEGKGIYKRLE---------------------------

Query:  WLNMTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDML
        WL+ TGFM+++W SMTM FMV   QVILKGD SLTKAECSLKT+SKTWEEE QGFL+EF  ++I   +  ES++EE+GEE NLPMIRNLL + + +F++ 
Subjt:  WLNMTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDML

Query:  KELP
        K LP
Subjt:  KELP

TrEMBL top hitse value%identityAlignment
A0A5A7V4D8 Disease resistance protein1.4e-7654.61Show/hide
Query:  MKQITIPIKGNYAIGE--LSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQ
        MKQ+T+PIKGN+   E    VK LSD+EFRARLDKGLCF+CNDKYS  H CK   NRELM FI NE E+    E K +   +  EL +L +K  ++I+L+
Subjt:  MKQITIPIKGNYAIGE--LSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQ

Query:  TILGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRVA-----------KFRVTIGDGNTSEGKGIYKRLE---------------------------
        TILGFTSKGTMK++GT+ DREVIILID GATHNFIH+ V            KF VTIGDG   EG GI K +E                           
Subjt:  TILGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRVA-----------KFRVTIGDGNTSEGKGIYKRLE---------------------------

Query:  WLNMTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDML
        WL+ TGFM+++W SMTM FMV   QVILKGD SLTKAECSLKT+SKTWEEE QGFL+EF  ++I   +  ES++EE+GEE NLPMIRNLL + + +F++ 
Subjt:  WLNMTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDML

Query:  KELP
        K LP
Subjt:  KELP

A0A5A7VNX8 Retrotransposable element Tf25.7e-7554.82Show/hide
Query:  MKQITIPIKGNYAIGELSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQTI
        MKQI IPI+GNYA GE SVKCLSD+EFRARLDKGLCFQCNDKYS  H CK                               VE +TLK+K ET+I L+TI
Subjt:  MKQITIPIKGNYAIGELSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQTI

Query:  LGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRV-----------AKFRVTIGDGNTSEGKGIYKRLE--------------------------WLN
        LGFTSKGT+KL+GTV+ REVIILID GATHNFIHQ V            K  VTIGDG   EGKGI KRLE                          WL+
Subjt:  LGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRV-----------AKFRVTIGDGNTSEGKGIYKRLE--------------------------WLN

Query:  MTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDMLKEL
         TGFM ++WSSMTM FM +  QV+L+GD SLTKAECSL T+S+TWEEE QGFLLEF NV++     +ES++EE+GEE  L MI NLLKR++ +F+M K L
Subjt:  MTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDMLKEL

Query:  P
        P
Subjt:  P

A0A5D3BYU4 Retrotransposon protein1.0e-11684.53Show/hide
Query:  MKQITIPIKGNYAIGELSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQTI
        MKQITIPIKGNYAIGELSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQTI
Subjt:  MKQITIPIKGNYAIGELSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQTI

Query:  LGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRVAKFRVTIGDGNTSEGKGIYKRLEWLNMTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECS
        LGFTSKGTMKLKGTVQDR                                         EWLNMTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECS
Subjt:  LGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRVAKFRVTIGDGNTSEGKGIYKRLEWLNMTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECS

Query:  LKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDMLKELPL
        LKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDMLKELPL
Subjt:  LKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDMLKELPL

A0A5D3DSW7 Retrotransposable element Tf25.7e-7554.82Show/hide
Query:  MKQITIPIKGNYAIGELSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQTI
        MKQI IPI+GNYA GE SVKCLSD+EFRARLDKGLCFQCNDKYS  H CK                               VE +TLK+K ET+I L+TI
Subjt:  MKQITIPIKGNYAIGELSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQTI

Query:  LGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRV-----------AKFRVTIGDGNTSEGKGIYKRLE--------------------------WLN
        LGFTSKGT+KL+GTV+ REVIILID GATHNFIHQ V            K  VTIGDG   EGKGI KRLE                          WL+
Subjt:  LGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRV-----------AKFRVTIGDGNTSEGKGIYKRLE--------------------------WLN

Query:  MTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDMLKEL
         TGFM ++WSSMTM FM +  QV+L+GD SLTKAECSL T+S+TWEEE QGFLLEF NV++     +ES++EE+GEE  L MI NLLKR++ +F+M K L
Subjt:  MTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDMLKEL

Query:  P
        P
Subjt:  P

A0A5D3DUJ0 Ty3/gypsy retrotransposon protein1.4e-7654.61Show/hide
Query:  MKQITIPIKGNYAIGE--LSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQ
        MKQ+T+PIKGN+   E    VK LSD+EFRARLDKGLCF+CNDKYS  H CK   NRELM FI NE E+    E K +   +  EL +L +K  ++I+L+
Subjt:  MKQITIPIKGNYAIGE--LSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQ

Query:  TILGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRVA-----------KFRVTIGDGNTSEGKGIYKRLE---------------------------
        TILGFTSKGTMK++GT+ DREVIILID GATHNFIH+ V            KF VTIGDG   EG GI K +E                           
Subjt:  TILGFTSKGTMKLKGTVQDREVIILIDIGATHNFIHQRVA-----------KFRVTIGDGNTSEGKGIYKRLE---------------------------

Query:  WLNMTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDML
        WL+ TGFM+++W SMTM FMV   QVILKGD SLTKAECSLKT+SKTWEEE QGFL+EF  ++I   +  ES++EE+GEE NLPMIRNLL + + +F++ 
Subjt:  WLNMTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFHNVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDML

Query:  KELP
        K LP
Subjt:  KELP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAAATTACGATTCCAATCAAGGGAAATTATGCGATAGGTGAGCTGTCGGTTAAATGCTTATCAGATAATGAATTTCGAGCAAGGTTGGATAAGGGGTTATGCTT
CCAATGCAATGATAAGTATTCTTCTGAGCACATATGCAAGGTCAACAAGAATCGTGAATTGATGTCGTTTATTGCAAATGAAAAGGAAGATTGGGAGGAGGGAGAGATGA
AGTTGGAAGCCAAGCCTCAAGTGGTGGAACTCGAAACCCTAAAGCTAAAGGAAGAAACAAAAATAGCCCTTCAAACCATTTTGGGTTTTACTTCGAAGGGAACGATGAAA
TTGAAAGGGACAGTGCAGGACAGGGAAGTAATAATTCTCATCGACATCGGTGCAACACATAATTTTATCCATCAAAGGGTAGCTAAATTCAGAGTGACGATTGGTGATGG
AAACACGTCGGAAGGAAAGGGGATTTATAAACGACTTGAGTGGCTGAATATGACTGGTTTTATGGATGTTTATTGGTCGTCGATGACAATGACCTTCATGGTAAAAAAAG
ATCAAGTAATTCTAAAAGGGGACTTGTCCCTCACAAAGGCAGAATGCTCTTTGAAGACACTATCCAAGACTTGGGAAGAAGAAGTTCAGGGTTTCTTGCTGGAATTCCAT
AATGTAAAAATTGGTGAATATAATTGGGATGAAAGTGATAGAGAAGAGAAAGGGGAGGAGTTAAACTTGCCCATGATTCGCAATTTGTTAAAAAGGTTTAAGGAAGTGTT
TGATATGCTGAAGGAGTTACCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAAATTACGATTCCAATCAAGGGAAATTATGCGATAGGTGAGCTGTCGGTTAAATGCTTATCAGATAATGAATTTCGAGCAAGGTTGGATAAGGGGTTATGCTT
CCAATGCAATGATAAGTATTCTTCTGAGCACATATGCAAGGTCAACAAGAATCGTGAATTGATGTCGTTTATTGCAAATGAAAAGGAAGATTGGGAGGAGGGAGAGATGA
AGTTGGAAGCCAAGCCTCAAGTGGTGGAACTCGAAACCCTAAAGCTAAAGGAAGAAACAAAAATAGCCCTTCAAACCATTTTGGGTTTTACTTCGAAGGGAACGATGAAA
TTGAAAGGGACAGTGCAGGACAGGGAAGTAATAATTCTCATCGACATCGGTGCAACACATAATTTTATCCATCAAAGGGTAGCTAAATTCAGAGTGACGATTGGTGATGG
AAACACGTCGGAAGGAAAGGGGATTTATAAACGACTTGAGTGGCTGAATATGACTGGTTTTATGGATGTTTATTGGTCGTCGATGACAATGACCTTCATGGTAAAAAAAG
ATCAAGTAATTCTAAAAGGGGACTTGTCCCTCACAAAGGCAGAATGCTCTTTGAAGACACTATCCAAGACTTGGGAAGAAGAAGTTCAGGGTTTCTTGCTGGAATTCCAT
AATGTAAAAATTGGTGAATATAATTGGGATGAAAGTGATAGAGAAGAGAAAGGGGAGGAGTTAAACTTGCCCATGATTCGCAATTTGTTAAAAAGGTTTAAGGAAGTGTT
TGATATGCTGAAGGAGTTACCTCTTTGA
Protein sequenceShow/hide protein sequence
MKQITIPIKGNYAIGELSVKCLSDNEFRARLDKGLCFQCNDKYSSEHICKVNKNRELMSFIANEKEDWEEGEMKLEAKPQVVELETLKLKEETKIALQTILGFTSKGTMK
LKGTVQDREVIILIDIGATHNFIHQRVAKFRVTIGDGNTSEGKGIYKRLEWLNMTGFMDVYWSSMTMTFMVKKDQVILKGDLSLTKAECSLKTLSKTWEEEVQGFLLEFH
NVKIGEYNWDESDREEKGEELNLPMIRNLLKRFKEVFDMLKELPL