; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0011042 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011042
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr04:27430301..27431200
RNA-Seq ExpressionIVF0011042
SyntenyIVF0011042
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053865.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]9.54e-210100Show/hide
Query:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW
        MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW
Subjt:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW

Query:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA
        TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA
Subjt:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA

Query:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
        LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
Subjt:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ

XP_008443284.2 PREDICTED: pentatricopeptide repeat-containing protein At2g35030, mitochondrial [Cucumis melo]2.65e-18992.57Show/hide
Query:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW
        MS+LYQISV EI  K T TTLLSSFGRYAF+LCNLHNSILSSQFST QVVPKI SPVRDFS NSNVARSN LITKLGKEGKIREARKVFEEMLDRDVVSW
Subjt:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW

Query:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA
        TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGY++L+RIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLF KMPERNVVSWNTVITA
Subjt:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA

Query:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
        LMQ +R+DEAQ LFNRMPERDVISWTTMVA LSKNGRIDDARLLFDKMP RNVVSWNAIIIGYAQNMR+DEAFKLFEQMPERELSSWNTMITGFIQ
Subjt:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ

XP_016899654.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g35030, mitochondrial-like, partial [Cucumis melo]9.89e-192100Show/hide
Query:  FGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRND
        FGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRND
Subjt:  FGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRND

Query:  AIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVIS
        AIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVIS
Subjt:  AIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVIS

Query:  WTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
        WTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
Subjt:  WTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ

XP_023527853.1 pentatricopeptide repeat-containing protein At2g35030, mitochondrial [Cucurbita pepo subsp. pepo]9.20e-17082.43Show/hide
Query:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW
        MSLLYQ+ +REIY K T    LS F RY  VLCN HNS LSS FSTYQVVPKI S  RD+S NSNVAR+N LITKLGKEGKI EAR+VFEEM DRDVVSW
Subjt:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW

Query:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA
        TAVITGYIKCGMIEEAK LFDR+DAIKNVVTWTALVSGY+RLSRIEEAR LFDAMPVKNVVSWNTMIEGYARKGW+DQA DLF +MPERNVVSWNTVITA
Subjt:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA

Query:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
        LM+ +R+DEAQELFN+MPERDVISWT MVA L+KNGRIDDARL+FDKMPERNVVSWNAII GYAQNMR+DEAF+LFE++PER++ SWN MITGFIQ
Subjt:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ

XP_038906177.1 pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X1 [Benincasa hispida]3.27e-17586.15Show/hide
Query:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW
        MSLLYQISVREIY K T   LLSSF RYA VLCNLHNSILSSQFST QVVPKI S VRD+S NSNVAR+N LITKLGKEGKI EAR+VFEEM DRDVVSW
Subjt:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW

Query:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA
        TAVITGYIKCGMIEEA+ LFDR D+IKNVVTWTALVSGY+RL+RIEEAR LFDAMPVKNVVSWNTMIEGYARKGW+DQA DLF +MPERNVVSWNTVITA
Subjt:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA

Query:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
        LMQ +R+DEAQELFN+MPERDVISWT MVA LSKNGRIDDARLLFDKMP+RNVVSWNAII GYAQNMR+DEAF+LFEQMPER++ SWNTMITGFIQ
Subjt:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ

TrEMBL top hitse value%identityAlignment
A0A0A0LCG2 Uncharacterized protein6.7e-14990.2Show/hide
Query:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW
        MSLLYQISV EI  K   TTLLSSFGRYAF+LCNLHNSILSSQFST QVVPKI SPVRDFS NSNVARSN LIT+LGKEGKI EAR+VFEEM DRDVVSW
Subjt:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW

Query:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA
        TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGY+R +RIEEARRLFDAMPVKNV+SWNTMIEGYARKGWIDQALDLF KMPERNVVSWNTVITA
Subjt:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA

Query:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
         MQ +R+DEAQELFNRMPERDVISWTTMVA LSKNGRIDDARLLFDKMP RNVVSWN +IIGYAQNMR+DEAFKLFEQMPERELSSWNTMITGFIQ
Subjt:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ

A0A1S3B8F2 pentatricopeptide repeat-containing protein At2g35030, mitochondrial4.5e-15392.57Show/hide
Query:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW
        MS+LYQISV EI  K T TTLLSSFGRYAF+LCNLHNSILSSQFST QVVPKI SPVRDFS NSNVARSN LITKLGKEGKIREARKVFEEMLDRDVVSW
Subjt:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW

Query:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA
        TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGY++L+RIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLF KMPERNVVSWNTVITA
Subjt:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA

Query:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
        LMQ +R+DEAQ LFNRMPERDVISWTTMVA LSKNGRIDDARLLFDKMP RNVVSWNAIIIGYAQNMR+DEAFKLFEQMPERELSSWNTMITGFIQ
Subjt:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ

A0A1S4DUJ7 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g35030, mitochondrial-like7.0e-154100Show/hide
Query:  FGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRND
        FGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRND
Subjt:  FGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRND

Query:  AIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVIS
        AIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVIS
Subjt:  AIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVIS

Query:  WTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
        WTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
Subjt:  WTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ

A0A5A7UH59 Pentatricopeptide repeat-containing protein4.5e-15392.57Show/hide
Query:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW
        MS+LYQISV EI  K T TTLLSSFGRYAF+LCNLHNSILSSQFST QVVPKI SPVRDFS NSNVARSN LITKLGKEGKIREARKVFEEMLDRDVVSW
Subjt:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW

Query:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA
        TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGY++L+RIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLF KMPERNVVSWNTVITA
Subjt:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA

Query:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
        LMQ +R+DEAQ LFNRMPERDVISWTTMVA LSKNGRIDDARLLFDKMP RNVVSWNAIIIGYAQNMR+DEAFKLFEQMPERELSSWNTMITGFIQ
Subjt:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ

A0A5D3DPR9 Pentatricopeptide repeat-containing protein1.2e-166100Show/hide
Query:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW
        MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW
Subjt:  MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSW

Query:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA
        TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA
Subjt:  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITA

Query:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
        LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
Subjt:  LMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ

SwissProt top hitse value%identityAlignment
O64766 Pentatricopeptide repeat-containing protein At2g35030, mitochondrial1.5e-8462.71Show/hide
Query:  STNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNV
        S+   V +   LI +L K GKI EARK+F+ + +RDVV+WT VITGYIK G + EA+ LFDR D+ KNVVTWTA+VSGY+R  ++  A  LF  MP +NV
Subjt:  STNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNV

Query:  VSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAII
        VSWNTMI+GYA+ G ID+AL+LF +MPERN+VSWN+++ AL+Q  RIDEA  LF RMP RDV+SWT MV  L+KNG++D+AR LFD MPERN++SWNA+I
Subjt:  VSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAII

Query:  IGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
         GYAQN RIDEA +LF+ MPER+ +SWNTMITGFI+
Subjt:  IGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ

P0C7R0 Pentatricopeptide repeat-containing protein At1g32415, mitochondrial1.7e-4838.96Show/hide
Query:  VPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRD----VVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRI
        +P   S  R FS          LI +   EG +  AR + +++  R     VV WT++++ Y K G ++EA+ LF+     +N+VT  A+++GY++  R+
Subjt:  VPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRD----VVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRI

Query:  EEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLF
         EA  LF  MP KNVVSW  M+      G  + A++LF +MPERNVVSWNT++T L+++  +++A+++F+ MP RDV+SW  M+    +N  +++A+LLF
Subjt:  EEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLF

Query:  DKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGF
          M E+NVV+W +++ GY +   + EA++LF +MPER + SW  MI+GF
Subjt:  DKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGF

Q56XI1 Pentatricopeptide repeat-containing protein At1g09410, mitochondrial2.4e-5842.26Show/hide
Query:  RDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPV
        R +ST      +N  IT L + GKI EARK+F+    + + SW +++ GY    M  +A+ LFD     +N+++W  LVSGY++   I+EAR++FD MP 
Subjt:  RDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPV

Query:  KNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWN
        +NVVSW  +++GY   G +D A  LF KMPE+N VSW  ++   +Q  RID+A +L+  +P++D I+ T+M+  L K GR+D+AR +FD+M ER+V++W 
Subjt:  KNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWN

Query:  AIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
         ++ GY QN R+D+A K+F+ MPE+   SW +M+ G++Q
Subjt:  AIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ

Q9FXB9 Pentatricopeptide repeat-containing protein At1g56690, mitochondrial2.8e-5946.85Show/hide
Query:  ITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYAR
        I++L + GKI EARK F+ +  + + SW ++++GY   G+ +EA+ LFD     +NVV+W  LVSGYI+   I EAR +F+ MP +NVVSW  M++GY +
Subjt:  ITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYAR

Query:  KGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEA
        +G + +A  LF +MPERN VSW  +   L+   RID+A++L++ MP +DV++ T M+  L + GR+D+ARL+FD+M ERNVV+W  +I GY QN R+D A
Subjt:  KGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEA

Query:  FKLFEQMPERELSSWNTMITGF
         KLFE MPE+   SW +M+ G+
Subjt:  FKLFEQMPERELSSWNTMITGF

Q9SY02 Pentatricopeptide repeat-containing protein At4g027501.6e-5444.93Show/hide
Query:  NRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEG
        N +I    +   + +AR++FE M +RDV SW  +++GY + G +++A+++FDR    KN V+W AL+S Y++ S++EEA  LF +     +VSWN ++ G
Subjt:  NRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEG

Query:  YARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRI
        + +K  I +A   F  M  R+VVSWNT+IT   Q  +IDEA++LF+  P +DV +WT MV+   +N  +++AR LFDKMPERN VSWNA++ GY Q  R+
Subjt:  YARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRI

Query:  DEAFKLFEQMPERELSSWNTMITGFIQ
        + A +LF+ MP R +S+WNTMITG+ Q
Subjt:  DEAFKLFEQMPERELSSWNTMITGFIQ

Arabidopsis top hitse value%identityAlignment
AT1G09410.1 pentatricopeptide (PPR) repeat-containing protein1.7e-5942.26Show/hide
Query:  RDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPV
        R +ST      +N  IT L + GKI EARK+F+    + + SW +++ GY    M  +A+ LFD     +N+++W  LVSGY++   I+EAR++FD MP 
Subjt:  RDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPV

Query:  KNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWN
        +NVVSW  +++GY   G +D A  LF KMPE+N VSW  ++   +Q  RID+A +L+  +P++D I+ T+M+  L K GR+D+AR +FD+M ER+V++W 
Subjt:  KNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWN

Query:  AIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
         ++ GY QN R+D+A K+F+ MPE+   SW +M+ G++Q
Subjt:  AIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ

AT1G32415.1 pentatricopeptide (PPR) repeat-containing protein1.2e-4938.96Show/hide
Query:  VPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRD----VVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRI
        +P   S  R FS          LI +   EG +  AR + +++  R     VV WT++++ Y K G ++EA+ LF+     +N+VT  A+++GY++  R+
Subjt:  VPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRD----VVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRI

Query:  EEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLF
         EA  LF  MP KNVVSW  M+      G  + A++LF +MPERNVVSWNT++T L+++  +++A+++F+ MP RDV+SW  M+    +N  +++A+LLF
Subjt:  EEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLF

Query:  DKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGF
          M E+NVV+W +++ GY +   + EA++LF +MPER + SW  MI+GF
Subjt:  DKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGF

AT1G56690.1 Pentatricopeptide repeat (PPR) superfamily protein2.0e-6046.85Show/hide
Query:  ITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYAR
        I++L + GKI EARK F+ +  + + SW ++++GY   G+ +EA+ LFD     +NVV+W  LVSGYI+   I EAR +F+ MP +NVVSW  M++GY +
Subjt:  ITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYAR

Query:  KGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEA
        +G + +A  LF +MPERN VSW  +   L+   RID+A++L++ MP +DV++ T M+  L + GR+D+ARL+FD+M ERNVV+W  +I GY QN R+D A
Subjt:  KGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEA

Query:  FKLFEQMPERELSSWNTMITGF
         KLFE MPE+   SW +M+ G+
Subjt:  FKLFEQMPERELSSWNTMITGF

AT2G35030.1 Pentatricopeptide repeat (PPR) superfamily protein1.0e-8562.71Show/hide
Query:  STNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNV
        S+   V +   LI +L K GKI EARK+F+ + +RDVV+WT VITGYIK G + EA+ LFDR D+ KNVVTWTA+VSGY+R  ++  A  LF  MP +NV
Subjt:  STNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNV

Query:  VSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAII
        VSWNTMI+GYA+ G ID+AL+LF +MPERN+VSWN+++ AL+Q  RIDEA  LF RMP RDV+SWT MV  L+KNG++D+AR LFD MPERN++SWNA+I
Subjt:  VSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAII

Query:  IGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ
         GYAQN RIDEA +LF+ MPER+ +SWNTMITGFI+
Subjt:  IGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQ

AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-5544.93Show/hide
Query:  NRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEG
        N +I    +   + +AR++FE M +RDV SW  +++GY + G +++A+++FDR    KN V+W AL+S Y++ S++EEA  LF +     +VSWN ++ G
Subjt:  NRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEG

Query:  YARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRI
        + +K  I +A   F  M  R+VVSWNT+IT   Q  +IDEA++LF+  P +DV +WT MV+   +N  +++AR LFDKMPERN VSWNA++ GY Q  R+
Subjt:  YARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPERDVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRI

Query:  DEAFKLFEQMPERELSSWNTMITGFIQ
        + A +LF+ MP R +S+WNTMITG+ Q
Subjt:  DEAFKLFEQMPERELSSWNTMITGFIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTACTGTATCAGATATCAGTTAGAGAAATTTATACTAAACCAACAATCACAACTCTTCTTTCTAGTTTTGGCAGATATGCCTTCGTGTTGTGCAATTTGCATAA
CTCCATCTTATCATCACAGTTTTCCACCTATCAGGTTGTTCCCAAAATCCCATCACCAGTTAGAGATTTCAGTACCAATTCGAATGTTGCTCGTAGTAACCGGTTGATCA
CAAAGCTTGGTAAAGAAGGAAAAATTAGAGAAGCACGTAAGGTGTTTGAAGAAATGCTTGATCGAGATGTGGTCTCATGGACTGCAGTGATTACTGGGTATATTAAATGT
GGAATGATTGAGGAAGCCAAGACGTTATTTGATAGAAATGATGCTATAAAGAATGTCGTTACTTGGACTGCATTGGTTAGTGGGTATATAAGATTGAGCAGGATTGAGGA
GGCTAGAAGATTGTTTGATGCCATGCCTGTTAAGAATGTCGTGTCGTGGAACACTATGATTGAAGGGTATGCACGGAAAGGTTGGATTGATCAGGCTTTGGATTTGTTTG
GAAAAATGCCTGAGAGGAATGTGGTGTCTTGGAATACTGTCATTACAGCGTTGATGCAACATAAGAGAATAGATGAAGCTCAGGAGCTTTTTAATCGGATGCCAGAGAGA
GATGTGATTTCTTGGACTACCATGGTGGCTAGTTTGTCGAAAAATGGGAGAATTGATGATGCTCGATTACTGTTCGATAAAATGCCCGAGCGTAATGTGGTTTCCTGGAA
TGCAATAATTATTGGGTATGCTCAGAATATGCGGATTGATGAGGCATTCAAACTGTTTGAGCAAATGCCAGAGAGGGAACTGTCTTCATGGAACACTATGATTACTGGAT
TCATTCAAACGGTAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTACTGTATCAGATATCAGTTAGAGAAATTTATACTAAACCAACAATCACAACTCTTCTTTCTAGTTTTGGCAGATATGCCTTCGTGTTGTGCAATTTGCATAA
CTCCATCTTATCATCACAGTTTTCCACCTATCAGGTTGTTCCCAAAATCCCATCACCAGTTAGAGATTTCAGTACCAATTCGAATGTTGCTCGTAGTAACCGGTTGATCA
CAAAGCTTGGTAAAGAAGGAAAAATTAGAGAAGCACGTAAGGTGTTTGAAGAAATGCTTGATCGAGATGTGGTCTCATGGACTGCAGTGATTACTGGGTATATTAAATGT
GGAATGATTGAGGAAGCCAAGACGTTATTTGATAGAAATGATGCTATAAAGAATGTCGTTACTTGGACTGCATTGGTTAGTGGGTATATAAGATTGAGCAGGATTGAGGA
GGCTAGAAGATTGTTTGATGCCATGCCTGTTAAGAATGTCGTGTCGTGGAACACTATGATTGAAGGGTATGCACGGAAAGGTTGGATTGATCAGGCTTTGGATTTGTTTG
GAAAAATGCCTGAGAGGAATGTGGTGTCTTGGAATACTGTCATTACAGCGTTGATGCAACATAAGAGAATAGATGAAGCTCAGGAGCTTTTTAATCGGATGCCAGAGAGA
GATGTGATTTCTTGGACTACCATGGTGGCTAGTTTGTCGAAAAATGGGAGAATTGATGATGCTCGATTACTGTTCGATAAAATGCCCGAGCGTAATGTGGTTTCCTGGAA
TGCAATAATTATTGGGTATGCTCAGAATATGCGGATTGATGAGGCATTCAAACTGTTTGAGCAAATGCCAGAGAGGGAACTGTCTTCATGGAACACTATGATTACTGGAT
TCATTCAAACGGTAAACTAG
Protein sequenceShow/hide protein sequence
MSLLYQISVREIYTKPTITTLLSSFGRYAFVLCNLHNSILSSQFSTYQVVPKIPSPVRDFSTNSNVARSNRLITKLGKEGKIREARKVFEEMLDRDVVSWTAVITGYIKC
GMIEEAKTLFDRNDAIKNVVTWTALVSGYIRLSRIEEARRLFDAMPVKNVVSWNTMIEGYARKGWIDQALDLFGKMPERNVVSWNTVITALMQHKRIDEAQELFNRMPER
DVISWTTMVASLSKNGRIDDARLLFDKMPERNVVSWNAIIIGYAQNMRIDEAFKLFEQMPERELSSWNTMITGFIQTVN