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IVF0011076 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011076
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr08:13017976..13018440
RNA-Seq ExpressionIVF0011076
SyntenyIVF0011076
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026125.1 hypothetical protein E6C27_scaffold19G00740 [Cucumis melo var. makuwa]3.06e-8284.42Show/hide
Query:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN
        M+M+KLIDAKIKVRYNYTGFVPASI+ITDDQGDNFII TVPPP+ARWFVER VRVHGSFKSK A++FDEHNP AEVYTYN FQA P  TTKSRGDY+YLN
Subjt:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN

Query:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR
        SDKHSISN TQAKKNNSSE EYD FDQQL EKRKEK K +LIINDQDH HY KR
Subjt:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR

KAA0035247.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.95e-7477.92Show/hide
Query:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN
        M+M+KLIDAKIKVRYNY GFVPAS++ITD+QG+NFI+ TVPP +ARW VER+VRVHG+FK+K AD+FD+HNPLAE YTYNGFQA P E+T++RGDY++LN
Subjt:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN

Query:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR
        SDKHS+SN TQAKKNNSSESEYD FDQQLSE+RKEK KV+L+INDQDH HYSKR
Subjt:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR

KAA0040385.1 hypothetical protein E6C27_scaffold3125G00090 [Cucumis melo var. makuwa]4.21e-106100Show/hide
Query:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN
        MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN
Subjt:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN

Query:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR
        SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR
Subjt:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR

KAA0056838.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.01e-7076.62Show/hide
Query:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN
        M+M KLIDAKIKVRYNYTGFVPASI+ITD+QG+NFI+ TV P EARW VER+VRVHGSF++K AD+FD+HN LAE YTYNGFQA PPE T++ GDY+  N
Subjt:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN

Query:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR
        SDKHSIS  TQAKKNNSSESEYD FDQQLS++RKEK K +LIINDQ+H HYSKR
Subjt:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR

TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.09e-6976.62Show/hide
Query:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN
        M+M KLIDAKIKVRYNY GFVPASI+ITD+QG+NFI+ TV P EARW VER+VRVHGSF++K AD+FD+HN LAE YTYNGFQA PPE T++ GDY+  N
Subjt:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN

Query:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR
        SDKHSIS  TQAKKNNSSESEYD FDQQLS++RKEK K +LIINDQDH HYSKR
Subjt:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR

TrEMBL top hitse value%identityAlignment
A0A5A7SNW5 Uncharacterized protein4.8e-6684.42Show/hide
Query:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN
        M+M+KLIDAKIKVRYNYTGFVPASI+ITDDQGDNFII TVPPP+ARWFVER VRVHGSFKSK A++FDEHNP AEVYTYN FQA P  TTKSRGDY+YLN
Subjt:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN

Query:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR
        SDKHSISN TQAKKNNSSE EYD FDQQL EKRKEK K +LIINDQDH HY KR
Subjt:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR

A0A5A7TG40 Uncharacterized protein8.2e-82100Show/hide
Query:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN
        MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN
Subjt:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN

Query:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR
        SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR
Subjt:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR

A0A5A7US62 LINE-1 retrotransposable element ORF2 protein3.9e-6076.62Show/hide
Query:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN
        M+M KLIDAKIKVRYNY GFVPASI+ITD+QG+NFI+ TV P EARW VER+VRVHGSF++K AD+FD+HN LAE YTYNGFQA PPE T++ GDY+  N
Subjt:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN

Query:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR
        SDKHSIS  TQAKKNNSSESEYD FDQQLS++RKEK K +LIINDQDH HYSKR
Subjt:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR

A0A5D3BKT8 LINE-1 retrotransposable element ORF2 protein3.0e-6076.62Show/hide
Query:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN
        M+M KLIDAKIKVRYNYTGFVPASI+ITD+QG+NFI+ TV P EARW VER+VRVHGSF++K AD+FD+HN LAE YTYNGFQA PPE T++ GDY+  N
Subjt:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN

Query:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR
        SDKHSIS  TQAKKNNSSESEYD FDQQLS++RKEK K +LIINDQ+H HYSKR
Subjt:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR

A0A5D3DFM9 LINE-1 retrotransposable element ORF2 protein5.9e-6477.92Show/hide
Query:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN
        M+M+KLIDAKIKVRYNY GFVPAS++ITD+QG+NFI+ TVPP +ARW VER+VRVHG+FK+K AD+FD+HNPLAE YTYNGFQA P E+T++RGDY++LN
Subjt:  MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLN

Query:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR
        SDKHS+SN TQAKKNNSSESEYD FDQQLSE+RKEK KV+L+INDQDH HYSKR
Subjt:  SDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGAAAAAACTCATTGATGCCAAGATTAAAGTTAGATATAATTATACTGGCTTTGTTCCAGCTTCTATAGTGATCACTGATGATCAAGGCGATAATTTTATCAT
CAATACCGTTCCACCACCCGAAGCCAGATGGTTTGTGGAAAGAAGTGTAAGAGTTCATGGTTCTTTCAAATCTAAGACCGCAGACAAATTTGATGAACACAACCCTTTGG
CTGAAGTCTACACATACAATGGCTTTCAAGCAGCCCCGCCGGAAACAACAAAGTCACGCGGTGACTACAATTACCTAAACTCTGACAAGCATTCTATCTCAAATCCCACA
CAAGCCAAGAAAAACAACTCATCAGAATCTGAATATGATCTTTTCGATCAACAACTTAGTGAAAAAAGGAAAGAGAAAGCGAAGGTTATGCTCATCATAAATGATCAAGA
TCATTGTCATTACTCCAAGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATGAAAAAACTCATTGATGCCAAGATTAAAGTTAGATATAATTATACTGGCTTTGTTCCAGCTTCTATAGTGATCACTGATGATCAAGGCGATAATTTTATCAT
CAATACCGTTCCACCACCCGAAGCCAGATGGTTTGTGGAAAGAAGTGTAAGAGTTCATGGTTCTTTCAAATCTAAGACCGCAGACAAATTTGATGAACACAACCCTTTGG
CTGAAGTCTACACATACAATGGCTTTCAAGCAGCCCCGCCGGAAACAACAAAGTCACGCGGTGACTACAATTACCTAAACTCTGACAAGCATTCTATCTCAAATCCCACA
CAAGCCAAGAAAAACAACTCATCAGAATCTGAATATGATCTTTTCGATCAACAACTTAGTGAAAAAAGGAAAGAGAAAGCGAAGGTTATGCTCATCATAAATGATCAAGA
TCATTGTCATTACTCCAAGAGATAA
Protein sequenceShow/hide protein sequence
MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLNSDKHSISNPT
QAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR