; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0011090 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0011090
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLate embryogenesis abundant protein-like
Genome locationchr01:16181886..16182301
RNA-Seq ExpressionIVF0011090
SyntenyIVF0011090
Gene Ontology termsGO:0009414 - response to water deprivation (biological process)
GO:0009631 - cold acclimation (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0005829 - cytosol (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033798.1 putative dehydrin LEA [Cucumis melo var. makuwa]6.09e-2697.87Show/hide
Query:  MYGTSVATIRLTDKHGNPIQLTDEHNPVVLTDEHGNPMWLTDIETKL
        MYGTSVATIRLTDKHGNPIQLTDEHNPVVLTDEHGNPMWLTDIETK+
Subjt:  MYGTSVATIRLTDKHGNPIQLTDEHNPVVLTDEHGNPMWLTDIETKL
KGN43153.1 hypothetical protein Csa_020434 [Cucumis sativus]1.65e-3664.49Show/hide
Query:  MYGTSVATIRLTDKHGNPIQLTDEHNPVVLTDEHGNPMWLTDIETKL---------------PLQPHEEDEDCGSSS-------PSNFLNYYLSFHFGYV
        MYGTSVATIRLTD          EHNPVVLTDEHGNPMWL+D+ETK+               PLQPHE+DEDCGSSS        SNFLNYYLSFHFGYV
Subjt:  MYGTSVATIRLTDKHGNPIQLTDEHNPVVLTDEHGNPMWLTDIETKL---------------PLQPHEEDEDCGSSS-------PSNFLNYYLSFHFGYV

Query:  RDQNSLL
        RDQ SLL
Subjt:  RDQNSLL
PPR98438.1 hypothetical protein GOBAR_AA22213 [Gossypium barbadense]1.30e-0974.36Show/hide
Query:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLP
        L D+HGNPIQLTDEH NPV LTDEHGNP+++T I TK P
Subjt:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLP
XP_038887694.1 late embryogenesis abundant protein-like isoform X1 [Benincasa hispida]4.12e-1041.11Show/hide
Query:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLP--------------------------------------LQPHEEDEDCGSS
        + D+HGNPI+LTDE  NPV+LTDEHGNPMWLT + TK+                                       L PHEEDED GS+
Subjt:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLP--------------------------------------LQPHEEDEDCGSS
XP_038887695.1 embryogenic cell protein 40-like isoform X2 [Benincasa hispida]2.36e-1041.11Show/hide
Query:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLP--------------------------------------LQPHEEDEDCGSS
        + D+HGNPI+LTDE  NPV+LTDEHGNPMWLT + TK+                                       L PHEEDED GS+
Subjt:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLP--------------------------------------LQPHEEDEDCGSS
TrEMBL top hitse value%identityAlignment
A0A0A0K124 Uncharacterized protein2.7e-2664.49Show/hide
Query:  MYGTSVATIRLTDKHGNPIQLTDEHNPVVLTDEHGNPMWLTDIETKL---------------PLQPHEEDEDCGSSS-------PSNFLNYYLSFHFGYV
        MYGTSVATIR          LTDEHNPVVLTDEHGNPMWL+D+ETK+               PLQPHE+DEDCGSSS        SNFLNYYLSFHFGYV
Subjt:  MYGTSVATIRLTDKHGNPIQLTDEHNPVVLTDEHGNPMWLTDIETKL---------------PLQPHEEDEDCGSSS-------PSNFLNYYLSFHFGYV

Query:  RDQNSLL
        RDQ SLL
Subjt:  RDQNSLL
A0A5A7ST54 Putative dehydrin LEA1.2e-1897.87Show/hide
Query:  MYGTSVATIRLTDKHGNPIQLTDEHNPVVLTDEHGNPMWLTDIETKL
        MYGTSVATIRLTDKHGNPIQLTDEHNPVVLTDEHGNPMWLTDIETK+
Subjt:  MYGTSVATIRLTDKHGNPIQLTDEHNPVVLTDEHGNPMWLTDIETKL
A0A5D2LFG0 Uncharacterized protein1.4e-0674.36Show/hide
Query:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLP
        L D+HGNPIQLTDEH NPV LTDEHGNP+++T I TK P
Subjt:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLP
A0A5D2R258 Uncharacterized protein1.4e-0674.36Show/hide
Query:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLP
        L D+HGNPIQLTDEH NPV LTDEHGNP+++T I TK P
Subjt:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLP
A0A6P4M2N4 late embryogenesis abundant protein1.4e-0674.36Show/hide
Query:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLP
        L D+HGNPIQLTDEH NPV LTDEHGNP+++T I TK P
Subjt:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLP
SwissProt top hitse value%identityAlignment
P21298 Late embryogenesis abundant protein6.2e-0453.85Show/hide
Query:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLP
        L D+ GNPI LTD + NPV L+DE GNPM +T + +  P
Subjt:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLP
Q07322 Embryogenic cell protein 408.6e-0650Show/hide
Query:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLPLQPHEEDEDCGSS
        L D+ GNPIQLTD+H NPV LTDE+GNP+ +T + T      H +    G+S
Subjt:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPMWLTDIETKLPLQPHEEDEDCGSS
Q96261 Probable dehydrin LEA5.6e-0551.02Show/hide
Query:  LTDKHGNPIQLTD-EHNPVV-LTDEHGNPMWLTDIETKLPLQPHEEDED
        L D+ GNPI LTD + NP+V LTDEHGNPM+LT + +  P        D
Subjt:  LTDKHGNPIQLTD-EHNPVV-LTDEHGNPMWLTDIETKLPLQPHEEDED
Arabidopsis top hitse value%identityAlignment
AT2G21490.1 dehydrin LEA4.0e-0651.02Show/hide
Query:  LTDKHGNPIQLTD-EHNPVV-LTDEHGNPMWLTDIETKLPLQPHEEDED
        L D+ GNPI LTD + NP+V LTDEHGNPM+LT + +  P        D
Subjt:  LTDKHGNPIQLTD-EHNPVV-LTDEHGNPMWLTDIETKLPLQPHEEDED

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGGGACGAGCGTGGCAACCATCCGACTCACCGACAAGCATGGCAACCCCATCCAACTCACCGACGAGCACAACCCGGTAGTGCTGACTGATGAACATGGCAACCC
CATGTGGCTCACTGACATCGAAACCAAGCTGCCGTTGCAGCCACATGAGGAGGATGAAGATTGTGGCTCTAGTTCCCCCTCCAACTTTTTGAACTATTACCTGTCGTTTC
ACTTTGGATATGTTCGAGATCAAAATTCACTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACGGGACGAGCGTGGCAACCATCCGACTCACCGACAAGCATGGCAACCCCATCCAACTCACCGACGAGCACAACCCGGTAGTGCTGACTGATGAACATGGCAACCC
CATGTGGCTCACTGACATCGAAACCAAGCTGCCGTTGCAGCCACATGAGGAGGATGAAGATTGTGGCTCTAGTTCCCCCTCCAACTTTTTGAACTATTACCTGTCGTTTC
ACTTTGGATATGTTCGAGATCAAAATTCACTTTTGTGA
Protein sequenceShow/hide protein sequence
MYGTSVATIRLTDKHGNPIQLTDEHNPVVLTDEHGNPMWLTDIETKLPLQPHEEDEDCGSSSPSNFLNYYLSFHFGYVRDQNSLL